EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008208 (Gene tree)
Gene ID: 103027086
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 47056 bases
Position: chr20:33858217-33905272
Accession: 103027086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008479	Exo_endo_phos	PF03372.23	1.2e-13	1	1
ENSAMXP00000008479	DUF1866	PF08952.11	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008479	-	5392	XM_022681445	ENSAMXP00000008479	1604 (aa)	XP_022537166	W5KLL7

Gene Model

Click here to download ENSAMXG00000008208's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00562	Inositol phosphate metabolism	KEGG
amex01100	Metabolic pathways	KEGG
amex04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008208	synj1	95	63.514	ENSG00000159082	SYNJ1	100	83.381	Homo_sapiens
ENSAMXG00000008208	synj1	74	88.314	ENSAPOG00000002809	synj1	99	83.296	Acanthochromis_polyacanthus
ENSAMXG00000008208	synj1	95	61.190	ENSAMEG00000015028	SYNJ1	66	77.674	Ailuropoda_melanoleuca
ENSAMXG00000008208	synj1	99	74.104	ENSACIG00000008857	synj1	98	82.862	Amphilophus_citrinellus
ENSAMXG00000008208	synj1	100	74.616	ENSAOCG00000009835	synj1	98	85.340	Amphiprion_ocellaris
ENSAMXG00000008208	synj1	100	75.268	ENSAPEG00000021010	synj1	100	76.278	Amphiprion_percula
ENSAMXG00000008208	synj1	99	75.433	ENSATEG00000002306	synj1	99	75.210	Anabas_testudineus
ENSAMXG00000008208	synj1	95	60.526	ENSAPLG00000011832	SYNJ1	69	76.615	Anas_platyrhynchos
ENSAMXG00000008208	synj1	75	70.616	ENSACAG00000003006	-	83	77.687	Anolis_carolinensis
ENSAMXG00000008208	synj1	95	61.142	ENSANAG00000027325	SYNJ1	84	76.706	Aotus_nancymaae
ENSAMXG00000008208	synj1	99	75.404	ENSACLG00000002255	synj1	99	83.774	Astatotilapia_calliptera
ENSAMXG00000008208	synj1	95	63.740	ENSBTAG00000003063	SYNJ1	83	77.352	Bos_taurus
ENSAMXG00000008208	synj1	95	62.217	ENSCJAG00000009187	SYNJ1	84	76.797	Callithrix_jacchus
ENSAMXG00000008208	synj1	95	61.371	ENSCAFG00000009041	SYNJ1	99	69.773	Canis_familiaris
ENSAMXG00000008208	synj1	95	63.532	ENSCAFG00020025776	SYNJ1	99	61.675	Canis_lupus_dingo
ENSAMXG00000008208	synj1	95	64.834	ENSCHIG00000005095	SYNJ1	99	62.141	Capra_hircus
ENSAMXG00000008208	synj1	95	63.363	ENSTSYG00000014541	SYNJ1	96	68.158	Carlito_syrichta
ENSAMXG00000008208	synj1	78	64.280	ENSCAPG00000014483	SYNJ1	88	66.952	Cavia_aperea
ENSAMXG00000008208	synj1	95	62.970	ENSCPOG00000012182	SYNJ1	99	60.566	Cavia_porcellus
ENSAMXG00000008208	synj1	95	62.041	ENSCCAG00000020825	SYNJ1	84	76.524	Cebus_capucinus
ENSAMXG00000008208	synj1	95	62.150	ENSCATG00000033891	SYNJ1	99	70.553	Cercocebus_atys
ENSAMXG00000008208	synj1	95	60.138	ENSCLAG00000009796	SYNJ1	100	82.902	Chinchilla_lanigera
ENSAMXG00000008208	synj1	80	67.277	ENSCSAG00000009654	SYNJ1	83	76.888	Chlorocebus_sabaeus
ENSAMXG00000008208	synj1	82	73.616	ENSCHOG00000012390	SYNJ1	54	74.324	Choloepus_hoffmanni
ENSAMXG00000008208	synj1	74	71.197	ENSCPBG00000006402	SYNJ1	87	77.064	Chrysemys_picta_bellii
ENSAMXG00000008208	synj1	95	63.683	ENSCANG00000031359	SYNJ1	84	76.888	Colobus_angolensis_palliatus
ENSAMXG00000008208	synj1	83	69.469	ENSCGRG00001010861	Synj1	83	76.208	Cricetulus_griseus_chok1gshd
ENSAMXG00000008208	synj1	77	67.903	ENSCGRG00000015749	Synj1	100	82.471	Cricetulus_griseus_crigri
ENSAMXG00000008208	synj1	67	88.278	ENSCSEG00000019614	synj1	98	84.634	Cynoglossus_semilaevis
ENSAMXG00000008208	synj1	94	73.430	ENSCVAG00000019250	synj1	99	79.941	Cyprinodon_variegatus
ENSAMXG00000008208	synj1	81	88.200	ENSDARG00000025011	synj1	99	88.727	Danio_rerio
ENSAMXG00000008208	synj1	89	60.434	ENSDNOG00000010732	SYNJ1	91	74.254	Dasypus_novemcinctus
ENSAMXG00000008208	synj1	55	76.344	ENSETEG00000018674	SYNJ1	59	76.344	Echinops_telfairi
ENSAMXG00000008208	synj1	95	63.776	ENSEASG00005006287	SYNJ1	96	79.471	Equus_asinus_asinus
ENSAMXG00000008208	synj1	95	64.003	ENSECAG00000004829	SYNJ1	99	70.320	Equus_caballus
ENSAMXG00000008208	synj1	87	70.818	ENSEEUG00000005150	SYNJ1	62	70.818	Erinaceus_europaeus
ENSAMXG00000008208	synj1	100	71.188	ENSELUG00000009731	synj1	100	69.521	Esox_lucius
ENSAMXG00000008208	synj1	95	63.450	ENSFCAG00000012498	SYNJ1	100	61.320	Felis_catus
ENSAMXG00000008208	synj1	78	50.697	ENSFALG00000004680	SYNJ1	61	69.634	Ficedula_albicollis
ENSAMXG00000008208	synj1	79	67.285	ENSFDAG00000016818	SYNJ1	100	82.902	Fukomys_damarensis
ENSAMXG00000008208	synj1	99	73.106	ENSFHEG00000017689	synj1	99	74.568	Fundulus_heteroclitus
ENSAMXG00000008208	synj1	68	84.325	ENSGMOG00000014852	synj1	82	83.988	Gadus_morhua
ENSAMXG00000008208	synj1	95	62.131	ENSGALG00000034317	SYNJ1	100	60.920	Gallus_gallus
ENSAMXG00000008208	synj1	82	83.346	ENSGAFG00000019466	synj1	99	74.923	Gambusia_affinis
ENSAMXG00000008208	synj1	80	79.833	ENSGACG00000020575	synj1	99	80.473	Gasterosteus_aculeatus
ENSAMXG00000008208	synj1	89	66.234	ENSGAGG00000022523	SYNJ1	80	77.298	Gopherus_agassizii
ENSAMXG00000008208	synj1	95	61.345	ENSGGOG00000015945	SYNJ1	99	70.615	Gorilla_gorilla
ENSAMXG00000008208	synj1	99	74.235	ENSHBUG00000007774	synj1	99	82.628	Haplochromis_burtoni
ENSAMXG00000008208	synj1	95	59.963	ENSHGLG00000006420	SYNJ1	100	82.615	Heterocephalus_glaber_female
ENSAMXG00000008208	synj1	95	61.327	ENSHGLG00100012591	SYNJ1	100	82.615	Heterocephalus_glaber_male
ENSAMXG00000008208	synj1	80	75.561	ENSHCOG00000012774	synj1	96	76.157	Hippocampus_comes
ENSAMXG00000008208	synj1	100	82.371	ENSIPUG00000010691	SYNJ1	100	83.013	Ictalurus_punctatus
ENSAMXG00000008208	synj1	95	60.346	ENSSTOG00000015806	SYNJ1	83	77.452	Ictidomys_tridecemlineatus
ENSAMXG00000008208	synj1	95	57.233	ENSJJAG00000020168	Synj1	68	72.136	Jaculus_jaculus
ENSAMXG00000008208	synj1	99	73.590	ENSKMAG00000004221	synj1	87	89.318	Kryptolebias_marmoratus
ENSAMXG00000008208	synj1	90	78.780	ENSLBEG00000015081	synj1	98	79.238	Labrus_bergylta
ENSAMXG00000008208	synj1	68	76.349	ENSLACG00000005928	SYNJ1	68	77.746	Latimeria_chalumnae
ENSAMXG00000008208	synj1	95	67.584	ENSLOCG00000009230	synj1	73	83.898	Lepisosteus_oculatus
ENSAMXG00000008208	synj1	93	61.988	ENSMFAG00000018883	SYNJ1	84	75.678	Macaca_fascicularis
ENSAMXG00000008208	synj1	95	60.161	ENSMMUG00000004624	SYNJ1	83	76.979	Macaca_mulatta
ENSAMXG00000008208	synj1	95	63.034	ENSMNEG00000040077	SYNJ1	100	60.119	Macaca_nemestrina
ENSAMXG00000008208	synj1	95	63.034	ENSMLEG00000037029	SYNJ1	84	76.797	Mandrillus_leucophaeus
ENSAMXG00000008208	synj1	99	74.450	ENSMAMG00000013404	synj1	100	75.238	Mastacembelus_armatus
ENSAMXG00000008208	synj1	99	75.404	ENSMZEG00005024358	synj1	99	84.909	Maylandia_zebra
ENSAMXG00000008208	synj1	96	59.838	ENSMGAG00000014522	SYNJ1	88	63.790	Meleagris_gallopavo
ENSAMXG00000008208	synj1	77	68.055	ENSMAUG00000009743	Synj1	100	82.759	Mesocricetus_auratus
ENSAMXG00000008208	synj1	95	62.899	ENSMICG00000034953	SYNJ1	99	70.722	Microcebus_murinus
ENSAMXG00000008208	synj1	80	81.413	ENSMMOG00000010203	synj1	98	81.226	Mola_mola
ENSAMXG00000008208	synj1	66	72.114	ENSMODG00000021073	SYNJ1	80	72.907	Monodelphis_domestica
ENSAMXG00000008208	synj1	99	74.522	ENSMALG00000014015	synj1	99	74.744	Monopterus_albus
ENSAMXG00000008208	synj1	95	60.236	MGP_CAROLIEiJ_G0020951	Synj1	100	83.046	Mus_caroli
ENSAMXG00000008208	synj1	95	60.608	ENSMUSG00000022973	Synj1	100	83.046	Mus_musculus
ENSAMXG00000008208	synj1	95	59.484	MGP_PahariEiJ_G0016656	Synj1	100	83.046	Mus_pahari
ENSAMXG00000008208	synj1	95	60.222	MGP_SPRETEiJ_G0021857	Synj1	100	83.190	Mus_spretus
ENSAMXG00000008208	synj1	95	61.115	ENSMPUG00000001153	SYNJ1	67	77.290	Mustela_putorius_furo
ENSAMXG00000008208	synj1	64	49.094	ENSMLUG00000005764	-	55	71.747	Myotis_lucifugus
ENSAMXG00000008208	synj1	79	67.530	ENSNGAG00000000453	Synj1	100	82.902	Nannospalax_galili
ENSAMXG00000008208	synj1	99	72.052	ENSNBRG00000011936	synj1	94	83.348	Neolamprologus_brichardi
ENSAMXG00000008208	synj1	84	59.174	ENSNLEG00000003734	SYNJ1	99	63.920	Nomascus_leucogenys
ENSAMXG00000008208	synj1	59	73.234	ENSMEUG00000004158	-	63	64.855	Notamacropus_eugenii
ENSAMXG00000008208	synj1	88	77.603	ENSOPRG00000013602	SYNJ1	63	77.603	Ochotona_princeps
ENSAMXG00000008208	synj1	89	74.415	ENSONIG00000004667	synj1	78	88.678	Oreochromis_niloticus
ENSAMXG00000008208	synj1	95	59.938	ENSOCUG00000001420	SYNJ1	66	78.173	Oryctolagus_cuniculus
ENSAMXG00000008208	synj1	98	74.421	ENSORLG00000004320	synj1	99	81.255	Oryzias_latipes
ENSAMXG00000008208	synj1	80	78.935	ENSORLG00020011994	synj1	97	78.448	Oryzias_latipes_hni
ENSAMXG00000008208	synj1	99	74.421	ENSORLG00015018077	synj1	95	74.770	Oryzias_latipes_hsok
ENSAMXG00000008208	synj1	95	76.564	ENSOMEG00000014322	synj1	99	80.030	Oryzias_melastigma
ENSAMXG00000008208	synj1	95	58.047	ENSOGAG00000006010	SYNJ1	68	73.866	Otolemur_garnettii
ENSAMXG00000008208	synj1	95	61.914	ENSOARG00000013414	SYNJ1	67	76.797	Ovis_aries
ENSAMXG00000008208	synj1	95	63.416	ENSPPAG00000026784	SYNJ1	84	76.979	Pan_paniscus
ENSAMXG00000008208	synj1	95	63.450	ENSPPRG00000023469	SYNJ1	100	60.875	Panthera_pardus
ENSAMXG00000008208	synj1	95	63.514	ENSPTIG00000007930	SYNJ1	100	60.935	Panthera_tigris_altaica
ENSAMXG00000008208	synj1	95	63.480	ENSPTRG00000048135	-	99	70.401	Pan_troglodytes
ENSAMXG00000008208	synj1	95	61.408	ENSPTRG00000023787	SYNJ1	99	70.401	Pan_troglodytes
ENSAMXG00000008208	synj1	95	63.034	ENSPANG00000022531	SYNJ1	84	76.888	Papio_anubis
ENSAMXG00000008208	synj1	67	87.269	ENSPKIG00000022603	synj1	89	86.630	Paramormyrops_kingsleyae
ENSAMXG00000008208	synj1	95	86.265	ENSPMGG00000016831	synj1	98	85.762	Periophthalmus_magnuspinnatus
ENSAMXG00000008208	synj1	77	68.509	ENSPEMG00000018767	Synj1	100	83.333	Peromyscus_maniculatus_bairdii
ENSAMXG00000008208	synj1	63	59.540	ENSPMAG00000002887	synj1	80	58.736	Petromyzon_marinus
ENSAMXG00000008208	synj1	95	62.276	ENSPCIG00000016372	SYNJ1	100	59.349	Phascolarctos_cinereus
ENSAMXG00000008208	synj1	80	83.650	ENSPFOG00000016886	synj1	99	83.523	Poecilia_formosa
ENSAMXG00000008208	synj1	98	75.212	ENSPLAG00000017559	synj1	99	81.413	Poecilia_latipinna
ENSAMXG00000008208	synj1	98	75.075	ENSPMEG00000007643	synj1	99	74.970	Poecilia_mexicana
ENSAMXG00000008208	synj1	84	83.591	ENSPREG00000012412	synj1	99	82.264	Poecilia_reticulata
ENSAMXG00000008208	synj1	82	65.765	ENSPPYG00000011365	SYNJ1	78	76.615	Pongo_abelii
ENSAMXG00000008208	synj1	67	84.286	ENSPCAG00000009906	SYNJ1	53	84.286	Procavia_capensis
ENSAMXG00000008208	synj1	88	76.382	ENSPCOG00000024841	SYNJ1	98	74.580	Propithecus_coquereli
ENSAMXG00000008208	synj1	67	72.420	ENSPVAG00000000892	SYNJ1	80	72.983	Pteropus_vampyrus
ENSAMXG00000008208	synj1	100	73.678	ENSPNYG00000022989	synj1	99	83.206	Pundamilia_nyererei
ENSAMXG00000008208	synj1	68	95.018	ENSPNAG00000021119	synj1	90	95.190	Pygocentrus_nattereri
ENSAMXG00000008208	synj1	95	60.025	ENSRNOG00000002051	Synj1	85	76.727	Rattus_norvegicus
ENSAMXG00000008208	synj1	95	63.161	ENSRBIG00000034477	SYNJ1	84	76.797	Rhinopithecus_bieti
ENSAMXG00000008208	synj1	95	60.446	ENSRROG00000039256	SYNJ1	84	76.888	Rhinopithecus_roxellana
ENSAMXG00000008208	synj1	95	62.786	ENSSBOG00000021001	SYNJ1	84	76.615	Saimiri_boliviensis_boliviensis
ENSAMXG00000008208	synj1	100	77.471	ENSSFOG00015006095	synj1	100	76.683	Scleropages_formosus
ENSAMXG00000008208	synj1	99	73.972	ENSSMAG00000018066	synj1	98	82.494	Scophthalmus_maximus
ENSAMXG00000008208	synj1	67	89.411	ENSSDUG00000013058	synj1	99	75.990	Seriola_dumerili
ENSAMXG00000008208	synj1	80	81.694	ENSSLDG00000021406	synj1	99	84.832	Seriola_lalandi_dorsalis
ENSAMXG00000008208	synj1	95	62.628	ENSSPUG00000012552	SYNJ1	98	60.517	Sphenodon_punctatus
ENSAMXG00000008208	synj1	95	74.860	ENSSPAG00000006812	SYNJ1	100	75.531	Stegastes_partitus
ENSAMXG00000008208	synj1	100	76.080	ENSSPAG00000017029	synj1	98	82.667	Stegastes_partitus
ENSAMXG00000008208	synj1	95	62.744	ENSSSCG00000012035	SYNJ1	82	77.580	Sus_scrofa
ENSAMXG00000008208	synj1	100	58.068	ENSTGUG00000013445	SYNJ1	67	76.966	Taeniopygia_guttata
ENSAMXG00000008208	synj1	99	73.773	ENSTRUG00000006907	synj1	96	80.493	Takifugu_rubripes
ENSAMXG00000008208	synj1	88	70.750	ENSTNIG00000009940	synj1	83	82.911	Tetraodon_nigroviridis
ENSAMXG00000008208	synj1	83	83.333	ENSTBEG00000016298	SYNJ1	81	83.333	Tupaia_belangeri
ENSAMXG00000008208	synj1	95	56.884	ENSTTRG00000002222	SYNJ1	68	70.263	Tursiops_truncatus
ENSAMXG00000008208	synj1	95	63.956	ENSUAMG00000018606	SYNJ1	98	80.570	Ursus_americanus
ENSAMXG00000008208	synj1	93	76.986	ENSUMAG00000018419	SYNJ1	99	80.000	Ursus_maritimus
ENSAMXG00000008208	synj1	84	85.714	ENSVPAG00000001241	SYNJ1	83	85.714	Vicugna_pacos
ENSAMXG00000008208	synj1	95	61.456	ENSVVUG00000023125	SYNJ1	99	60.954	Vulpes_vulpes
ENSAMXG00000008208	synj1	100	57.509	ENSXETG00000009899	synj1	69	74.141	Xenopus_tropicalis
ENSAMXG00000008208	synj1	80	83.026	ENSXCOG00000011896	synj1	99	81.136	Xiphophorus_couchianus
ENSAMXG00000008208	synj1	84	80.000	ENSXMAG00000017524	synj1	99	82.803	Xiphophorus_maculatus