EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008381 (Gene tree)
Gene ID: 103028977
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 42060 bases
Position: chr18:22402799-22444858
Accession: 103028977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038609	HARE-HTH	PF05066.13	2.3e-15	1	1
ENSAMXP00000008618	HARE-HTH	PF05066.13	2.3e-15	1	1
ENSAMXP00000047696	HARE-HTH	PF05066.13	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008618	-	3016	XM_022679753	ENSAMXP00000008618	544 (aa)	XP_022535474	W5KM06
ENSAMXT00000043263	-	2953	XM_022679754	ENSAMXP00000047696	523 (aa)	XP_022535475	UPI000BBD7415
ENSAMXT00000043844	-	4858	-	ENSAMXP00000038609	538 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000008381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008381	tbrg1	99	70.036	ENSAPOG00000017352	tbrg1	100	70.217	Acanthochromis_polyacanthus
ENSAMXG00000008381	tbrg1	95	69.582	ENSACIG00000021274	tbrg1	97	69.772	Amphilophus_citrinellus
ENSAMXG00000008381	tbrg1	99	69.495	ENSAOCG00000018605	tbrg1	100	69.982	Amphiprion_ocellaris
ENSAMXG00000008381	tbrg1	99	69.495	ENSAPEG00000022443	tbrg1	100	69.982	Amphiprion_percula
ENSAMXG00000008381	tbrg1	99	70.939	ENSATEG00000023537	tbrg1	100	71.119	Anabas_testudineus
ENSAMXG00000008381	tbrg1	98	71.193	ENSACLG00000000281	tbrg1	99	71.193	Astatotilapia_calliptera
ENSAMXG00000008381	tbrg1	97	70.074	ENSCSEG00000002445	tbrg1	98	70.818	Cynoglossus_semilaevis
ENSAMXG00000008381	tbrg1	96	63.781	ENSCVAG00000019626	tbrg1	99	68.266	Cyprinodon_variegatus
ENSAMXG00000008381	tbrg1	100	74.908	ENSDARG00000074996	tbrg1	100	75.458	Danio_rerio
ENSAMXG00000008381	tbrg1	91	48.413	ENSEBUG00000014060	tbrg1	91	49.167	Eptatretus_burgeri
ENSAMXG00000008381	tbrg1	99	72.364	ENSELUG00000017458	tbrg1	99	72.364	Esox_lucius
ENSAMXG00000008381	tbrg1	84	67.015	ENSFHEG00000004283	tbrg1	90	68.750	Fundulus_heteroclitus
ENSAMXG00000008381	tbrg1	91	71.230	ENSGAFG00000000204	tbrg1	99	67.455	Gambusia_affinis
ENSAMXG00000008381	tbrg1	98	71.193	ENSHBUG00000004935	tbrg1	99	71.193	Haplochromis_burtoni
ENSAMXG00000008381	tbrg1	96	65.177	ENSHCOG00000010588	tbrg1	98	65.549	Hippocampus_comes
ENSAMXG00000008381	tbrg1	99	81.801	ENSIPUG00000008697	tbrg1	99	82.169	Ictalurus_punctatus
ENSAMXG00000008381	tbrg1	91	73.413	ENSKMAG00000002775	tbrg1	92	73.611	Kryptolebias_marmoratus
ENSAMXG00000008381	tbrg1	99	69.174	ENSLBEG00000017559	tbrg1	98	71.727	Labrus_bergylta
ENSAMXG00000008381	tbrg1	99	74.460	ENSLOCG00000003093	tbrg1	99	74.460	Lepisosteus_oculatus
ENSAMXG00000008381	tbrg1	99	70.344	ENSMAMG00000000876	tbrg1	100	70.344	Mastacembelus_armatus
ENSAMXG00000008381	tbrg1	98	71.193	ENSMZEG00005013545	tbrg1	91	71.193	Maylandia_zebra
ENSAMXG00000008381	tbrg1	96	67.105	ENSMMOG00000005314	tbrg1	97	68.233	Mola_mola
ENSAMXG00000008381	tbrg1	91	76.190	ENSMALG00000011630	tbrg1	98	75.794	Monopterus_albus
ENSAMXG00000008381	tbrg1	89	75.051	ENSNBRG00000017490	tbrg1	93	75.051	Neolamprologus_brichardi
ENSAMXG00000008381	tbrg1	98	71.376	ENSONIG00000005284	tbrg1	99	71.376	Oreochromis_niloticus
ENSAMXG00000008381	tbrg1	99	69.620	ENSORLG00000014519	tbrg1	100	69.982	Oryzias_latipes
ENSAMXG00000008381	tbrg1	99	68.716	ENSORLG00020009567	tbrg1	100	69.078	Oryzias_latipes_hni
ENSAMXG00000008381	tbrg1	99	69.439	ENSORLG00015000448	tbrg1	100	69.801	Oryzias_latipes_hsok
ENSAMXG00000008381	tbrg1	99	68.953	ENSOMEG00000006130	tbrg1	100	69.801	Oryzias_melastigma
ENSAMXG00000008381	tbrg1	96	73.358	ENSPKIG00000012274	tbrg1	92	73.358	Paramormyrops_kingsleyae
ENSAMXG00000008381	tbrg1	98	68.889	ENSPMGG00000015968	tbrg1	99	69.686	Periophthalmus_magnuspinnatus
ENSAMXG00000008381	tbrg1	91	71.006	ENSPFOG00000004279	tbrg1	97	68.715	Poecilia_formosa
ENSAMXG00000008381	tbrg1	91	71.627	ENSPLAG00000001227	tbrg1	94	71.862	Poecilia_latipinna
ENSAMXG00000008381	tbrg1	91	70.809	ENSPMEG00000000955	tbrg1	97	68.450	Poecilia_mexicana
ENSAMXG00000008381	tbrg1	91	70.138	ENSPREG00000005246	tbrg1	97	67.712	Poecilia_reticulata
ENSAMXG00000008381	tbrg1	85	71.488	ENSPNYG00000012625	tbrg1	98	71.488	Pundamilia_nyererei
ENSAMXG00000008381	tbrg1	100	84.954	ENSPNAG00000028332	tbrg1	100	84.954	Pygocentrus_nattereri
ENSAMXG00000008381	tbrg1	93	74.853	ENSSFOG00015009308	tbrg1	100	69.165	Scleropages_formosus
ENSAMXG00000008381	tbrg1	99	70.545	ENSSMAG00000002529	tbrg1	100	72.467	Scophthalmus_maximus
ENSAMXG00000008381	tbrg1	99	71.609	ENSSDUG00000013674	tbrg1	99	71.609	Seriola_dumerili
ENSAMXG00000008381	tbrg1	92	74.023	ENSSLDG00000008932	tbrg1	98	74.023	Seriola_lalandi_dorsalis
ENSAMXG00000008381	tbrg1	85	74.249	ENSSPAG00000004808	tbrg1	99	74.249	Stegastes_partitus
ENSAMXG00000008381	tbrg1	91	72.311	ENSTRUG00000005960	tbrg1	95	73.108	Takifugu_rubripes
ENSAMXG00000008381	tbrg1	91	71.006	ENSXMAG00000001551	tbrg1	92	71.429	Xiphophorus_maculatus