EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008387 (Gene tree)
Gene ID: 103032098
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 12215 bases
Position: chr20:13438089-13450303
Accession: 103032098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008625	RRM_1	PF00076.22	3.5e-14	1	2
ENSAMXP00000008625	RRM_1	PF00076.22	3.5e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008625	-	3823	XM_007259403	ENSAMXP00000008625	461 (aa)	XP_007259465	W5KM13

Gene Model

Click here to download ENSAMXG00000008387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008387	htatsf1	79	63.298	ENSG00000102241	HTATSF1	100	57.509	Homo_sapiens
ENSAMXG00000008387	htatsf1	99	68.737	ENSAPOG00000009823	htatsf1	99	68.026	Acanthochromis_polyacanthus
ENSAMXG00000008387	htatsf1	100	68.376	ENSACIG00000020459	htatsf1	99	68.230	Amphilophus_citrinellus
ENSAMXG00000008387	htatsf1	99	68.319	ENSAOCG00000020994	htatsf1	99	68.387	Amphiprion_ocellaris
ENSAMXG00000008387	htatsf1	99	69.330	ENSAPEG00000016432	htatsf1	99	68.831	Amphiprion_percula
ENSAMXG00000008387	htatsf1	99	65.646	ENSATEG00000008903	htatsf1	97	65.646	Anabas_testudineus
ENSAMXG00000008387	htatsf1	92	61.737	ENSAPLG00000012401	HTATSF1	99	61.628	Anas_platyrhynchos
ENSAMXG00000008387	htatsf1	82	61.155	ENSACAG00000009346	HTATSF1	98	58.578	Anolis_carolinensis
ENSAMXG00000008387	htatsf1	99	69.639	ENSACLG00000008096	htatsf1	99	69.313	Astatotilapia_calliptera
ENSAMXG00000008387	htatsf1	83	62.025	ENSBTAG00000032711	HTATSF1	51	61.421	Bos_taurus
ENSAMXG00000008387	htatsf1	70	39.879	WBGene00022025	Y65B4A.1	71	39.823	Caenorhabditis_elegans
ENSAMXG00000008387	htatsf1	78	63.587	ENSCJAG00000003676	HTATSF1	50	62.563	Callithrix_jacchus
ENSAMXG00000008387	htatsf1	83	64.304	ENSCAFG00000023294	HTATSF1	50	64.213	Canis_familiaris
ENSAMXG00000008387	htatsf1	78	62.534	ENSCCAG00000025329	-	55	62.035	Cebus_capucinus
ENSAMXG00000008387	htatsf1	78	63.587	ENSCCAG00000022701	-	50	63.307	Cebus_capucinus
ENSAMXG00000008387	htatsf1	99	62.473	ENSCPBG00000026092	HTATSF1	99	61.834	Chrysemys_picta_bellii
ENSAMXG00000008387	htatsf1	88	40.685	ENSCING00000005914	-	90	45.692	Ciona_intestinalis
ENSAMXG00000008387	htatsf1	89	43.717	ENSCSAVG00000000371	-	77	43.455	Ciona_savignyi
ENSAMXG00000008387	htatsf1	99	70.499	ENSCVAG00000014070	htatsf1	98	69.783	Cyprinodon_variegatus
ENSAMXG00000008387	htatsf1	99	73.160	ENSDARG00000056649	htatsf1	99	71.706	Danio_rerio
ENSAMXG00000008387	htatsf1	77	44.413	FBgn0037081	barc	63	44.134	Drosophila_melanogaster
ENSAMXG00000008387	htatsf1	83	56.608	ENSEBUG00000001534	htatsf1	79	56.522	Eptatretus_burgeri
ENSAMXG00000008387	htatsf1	99	64.905	ENSELUG00000005486	htatsf1	90	66.314	Esox_lucius
ENSAMXG00000008387	htatsf1	83	63.959	ENSFCAG00000031924	HTATSF1	50	63.104	Felis_catus
ENSAMXG00000008387	htatsf1	100	62.500	ENSFALG00000003728	HTATSF1	99	61.814	Ficedula_albicollis
ENSAMXG00000008387	htatsf1	99	69.697	ENSFHEG00000020286	htatsf1	99	68.980	Fundulus_heteroclitus
ENSAMXG00000008387	htatsf1	79	69.589	ENSGMOG00000016444	htatsf1	100	68.194	Gadus_morhua
ENSAMXG00000008387	htatsf1	100	62.527	ENSGALG00000006410	HTATSF1	99	61.752	Gallus_gallus
ENSAMXG00000008387	htatsf1	99	70.282	ENSGAFG00000003041	htatsf1	98	69.783	Gambusia_affinis
ENSAMXG00000008387	htatsf1	99	67.532	ENSGACG00000020459	htatsf1	99	67.532	Gasterosteus_aculeatus
ENSAMXG00000008387	htatsf1	79	63.298	ENSGGOG00000026072	HTATSF1	50	62.531	Gorilla_gorilla
ENSAMXG00000008387	htatsf1	99	70.259	ENSHBUG00000004392	htatsf1	99	69.313	Haplochromis_burtoni
ENSAMXG00000008387	htatsf1	100	65.076	ENSHCOG00000009056	htatsf1	100	65.076	Hippocampus_comes
ENSAMXG00000008387	htatsf1	100	70.309	ENSIPUG00000017828	htatsf1	100	69.729	Ictalurus_punctatus
ENSAMXG00000008387	htatsf1	79	63.660	ENSSTOG00000012505	HTATSF1	51	64.213	Ictidomys_tridecemlineatus
ENSAMXG00000008387	htatsf1	99	70.563	ENSKMAG00000007622	htatsf1	99	70.065	Kryptolebias_marmoratus
ENSAMXG00000008387	htatsf1	100	68.443	ENSLBEG00000001154	htatsf1	99	65.948	Labrus_bergylta
ENSAMXG00000008387	htatsf1	99	60.860	ENSLACG00000015989	HTATSF1	99	60.085	Latimeria_chalumnae
ENSAMXG00000008387	htatsf1	99	48.632	ENSLOCG00000015118	htatsf1	99	47.107	Lepisosteus_oculatus
ENSAMXG00000008387	htatsf1	83	63.959	ENSLAFG00000014307	HTATSF1	56	63.184	Loxodonta_africana
ENSAMXG00000008387	htatsf1	79	63.298	ENSMNEG00000024084	HTATSF1	55	63.104	Macaca_nemestrina
ENSAMXG00000008387	htatsf1	99	67.826	ENSMAMG00000021225	htatsf1	99	68.261	Mastacembelus_armatus
ENSAMXG00000008387	htatsf1	99	69.639	ENSMZEG00005000485	htatsf1	99	69.313	Maylandia_zebra
ENSAMXG00000008387	htatsf1	94	62.125	ENSMGAG00000003558	HTATSF1	97	62.243	Meleagris_gallopavo
ENSAMXG00000008387	htatsf1	79	63.947	ENSMAUG00000007235	Htatsf1	50	64.411	Mesocricetus_auratus
ENSAMXG00000008387	htatsf1	79	62.599	ENSMICG00000009348	HTATSF1	50	63.613	Microcebus_murinus
ENSAMXG00000008387	htatsf1	79	64.171	ENSMOCG00000023007	-	50	64.631	Microtus_ochrogaster
ENSAMXG00000008387	htatsf1	100	67.532	ENSMMOG00000011013	htatsf1	100	67.532	Mola_mola
ENSAMXG00000008387	htatsf1	99	61.834	ENSMODG00000014087	-	97	60.981	Monodelphis_domestica
ENSAMXG00000008387	htatsf1	54	61.923	ENSMODG00000000199	-	98	61.538	Monodelphis_domestica
ENSAMXG00000008387	htatsf1	99	67.308	ENSMALG00000019977	htatsf1	99	67.312	Monopterus_albus
ENSAMXG00000008387	htatsf1	79	63.926	MGP_CAROLIEiJ_G0033094	Htatsf1	50	64.721	Mus_caroli
ENSAMXG00000008387	htatsf1	79	64.000	ENSMUSG00000067873	Htatsf1	50	64.467	Mus_musculus
ENSAMXG00000008387	htatsf1	79	64.000	MGP_SPRETEiJ_G0034249	Htatsf1	50	64.467	Mus_spretus
ENSAMXG00000008387	htatsf1	82	62.435	ENSMLUG00000009234	-	51	61.578	Myotis_lucifugus
ENSAMXG00000008387	htatsf1	79	64.439	ENSNGAG00000017831	Htatsf1	51	65.140	Nannospalax_galili
ENSAMXG00000008387	htatsf1	99	69.703	ENSNBRG00000003818	htatsf1	99	69.444	Neolamprologus_brichardi
ENSAMXG00000008387	htatsf1	79	61.458	ENSNLEG00000002746	HTATSF1	50	62.779	Nomascus_leucogenys
ENSAMXG00000008387	htatsf1	82	67.959	ENSMEUG00000004133	-	89	66.581	Notamacropus_eugenii
ENSAMXG00000008387	htatsf1	99	69.068	ENSONIG00000008638	htatsf1	99	69.528	Oreochromis_niloticus
ENSAMXG00000008387	htatsf1	92	62.028	ENSOANG00000011674	-	99	60.849	Ornithorhynchus_anatinus
ENSAMXG00000008387	htatsf1	99	67.316	ENSORLG00000002356	htatsf1	99	67.245	Oryzias_latipes
ENSAMXG00000008387	htatsf1	99	67.026	ENSORLG00020017818	htatsf1	96	67.241	Oryzias_latipes_hni
ENSAMXG00000008387	htatsf1	99	67.532	ENSORLG00015002268	htatsf1	99	67.749	Oryzias_latipes_hsok
ENSAMXG00000008387	htatsf1	99	70.130	ENSOMEG00000007564	htatsf1	99	69.697	Oryzias_melastigma
ENSAMXG00000008387	htatsf1	79	63.298	ENSPPAG00000024268	HTATSF1	50	62.531	Pan_paniscus
ENSAMXG00000008387	htatsf1	83	64.213	ENSPPRG00000014209	HTATSF1	50	63.868	Panthera_pardus
ENSAMXG00000008387	htatsf1	79	63.298	ENSPTRG00000044591	HTATSF1	50	62.531	Pan_troglodytes
ENSAMXG00000008387	htatsf1	99	67.447	ENSPKIG00000024852	htatsf1	99	66.809	Paramormyrops_kingsleyae
ENSAMXG00000008387	htatsf1	75	67.049	ENSPSIG00000010192	HTATSF1	96	67.045	Pelodiscus_sinensis
ENSAMXG00000008387	htatsf1	100	66.164	ENSPMGG00000006172	htatsf1	100	65.227	Periophthalmus_magnuspinnatus
ENSAMXG00000008387	htatsf1	99	55.769	ENSPCIG00000018896	-	98	55.224	Phascolarctos_cinereus
ENSAMXG00000008387	htatsf1	82	66.581	ENSPCIG00000030173	-	86	66.412	Phascolarctos_cinereus
ENSAMXG00000008387	htatsf1	99	70.282	ENSPFOG00000007871	htatsf1	96	69.783	Poecilia_formosa
ENSAMXG00000008387	htatsf1	99	69.848	ENSPLAG00000007532	htatsf1	99	69.348	Poecilia_latipinna
ENSAMXG00000008387	htatsf1	99	70.499	ENSPMEG00000000352	htatsf1	99	70.000	Poecilia_mexicana
ENSAMXG00000008387	htatsf1	99	71.150	ENSPREG00000007811	htatsf1	99	69.231	Poecilia_reticulata
ENSAMXG00000008387	htatsf1	82	56.883	ENSPCAG00000010576	HTATSF1	52	55.303	Procavia_capensis
ENSAMXG00000008387	htatsf1	79	63.660	ENSPCOG00000021823	HTATSF1	50	64.213	Propithecus_coquereli
ENSAMXG00000008387	htatsf1	83	63.683	ENSPVAG00000010281	HTATSF1	54	62.563	Pteropus_vampyrus
ENSAMXG00000008387	htatsf1	99	69.639	ENSPNYG00000016693	htatsf1	99	69.313	Pundamilia_nyererei
ENSAMXG00000008387	htatsf1	100	81.104	ENSPNAG00000006166	htatsf1	100	80.892	Pygocentrus_nattereri
ENSAMXG00000008387	htatsf1	79	63.298	ENSRROG00000021939	HTATSF1	50	62.850	Rhinopithecus_roxellana
ENSAMXG00000008387	htatsf1	78	62.973	ENSSBOG00000027186	-	50	62.469	Saimiri_boliviensis_boliviensis
ENSAMXG00000008387	htatsf1	83	66.581	ENSSHAG00000006440	-	97	66.240	Sarcophilus_harrisii
ENSAMXG00000008387	htatsf1	98	60.043	ENSSHAG00000018908	-	97	59.827	Sarcophilus_harrisii
ENSAMXG00000008387	htatsf1	99	66.385	ENSSFOG00015012002	htatsf1	99	66.320	Scleropages_formosus
ENSAMXG00000008387	htatsf1	99	68.467	ENSSMAG00000002970	htatsf1	99	68.398	Scophthalmus_maximus
ENSAMXG00000008387	htatsf1	99	65.727	ENSSDUG00000020002	htatsf1	99	65.217	Seriola_dumerili
ENSAMXG00000008387	htatsf1	99	69.197	ENSSLDG00000016880	htatsf1	99	69.348	Seriola_lalandi_dorsalis
ENSAMXG00000008387	htatsf1	82	62.500	ENSSARG00000005193	HTATSF1	51	62.240	Sorex_araneus
ENSAMXG00000008387	htatsf1	99	61.720	ENSSPUG00000014767	HTATSF1	98	60.645	Sphenodon_punctatus
ENSAMXG00000008387	htatsf1	99	69.631	ENSSPAG00000000732	htatsf1	99	69.631	Stegastes_partitus
ENSAMXG00000008387	htatsf1	79	63.757	ENSSSCG00000023062	HTATSF1	67	56.701	Sus_scrofa
ENSAMXG00000008387	htatsf1	99	61.242	ENSTGUG00000002099	HTATSF1	99	62.047	Taeniopygia_guttata
ENSAMXG00000008387	htatsf1	99	66.022	ENSTRUG00000013383	htatsf1	99	66.739	Takifugu_rubripes
ENSAMXG00000008387	htatsf1	99	65.870	ENSTNIG00000016140	htatsf1	99	64.655	Tetraodon_nigroviridis
ENSAMXG00000008387	htatsf1	76	62.327	ENSTTRG00000002269	HTATSF1	58	62.117	Tursiops_truncatus
ENSAMXG00000008387	htatsf1	83	64.051	ENSUAMG00000012048	HTATSF1	50	63.959	Ursus_americanus
ENSAMXG00000008387	htatsf1	100	58.936	ENSXETG00000019749	htatsf1	85	58.386	Xenopus_tropicalis
ENSAMXG00000008387	htatsf1	98	69.778	ENSXCOG00000006912	htatsf1	98	69.111	Xiphophorus_couchianus
ENSAMXG00000008387	htatsf1	99	70.933	ENSXMAG00000000490	htatsf1	99	69.444	Xiphophorus_maculatus