EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008624 (Gene tree)
Gene ID: 103022162
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6569 bases
Position: chr4:17415280-17421848
Accession: 103022162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008869	Ribosomal_L1	PF00687.21	3.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008869	-	1225	XM_015606342	ENSAMXP00000008869	373 (aa)	XP_015461828	W5KMQ7

Gene Model

Click here to download ENSAMXG00000008624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008624	rsl1d1	97	36.675	ENSG00000171490	RSL1D1	100	50.505	Homo_sapiens
ENSAMXG00000008624	rsl1d1	95	59.777	ENSAPOG00000004544	rsl1d1	91	61.404	Acanthochromis_polyacanthus
ENSAMXG00000008624	rsl1d1	97	36.790	ENSAMEG00000009570	RSL1D1	76	38.503	Ailuropoda_melanoleuca
ENSAMXG00000008624	rsl1d1	86	54.517	ENSACIG00000006608	rsl1d1	91	55.452	Amphilophus_citrinellus
ENSAMXG00000008624	rsl1d1	95	59.116	ENSAOCG00000001548	rsl1d1	93	59.943	Amphiprion_ocellaris
ENSAMXG00000008624	rsl1d1	95	59.116	ENSAPEG00000003334	rsl1d1	93	59.943	Amphiprion_percula
ENSAMXG00000008624	rsl1d1	84	59.048	ENSATEG00000009247	rsl1d1	93	57.849	Anabas_testudineus
ENSAMXG00000008624	rsl1d1	82	46.108	ENSAPLG00000004451	RSL1D1	54	54.321	Anas_platyrhynchos
ENSAMXG00000008624	rsl1d1	97	37.563	ENSANAG00000028185	-	81	37.500	Aotus_nancymaae
ENSAMXG00000008624	rsl1d1	89	38.606	ENSANAG00000034590	-	77	39.231	Aotus_nancymaae
ENSAMXG00000008624	rsl1d1	84	37.838	ENSANAG00000026520	-	70	37.838	Aotus_nancymaae
ENSAMXG00000008624	rsl1d1	86	58.879	ENSACLG00000017535	rsl1d1	95	57.637	Astatotilapia_calliptera
ENSAMXG00000008624	rsl1d1	98	39.364	ENSBTAG00000014588	RSL1D1	79	40.731	Bos_taurus
ENSAMXG00000008624	rsl1d1	93	39.637	ENSCJAG00000008375	-	78	40.360	Callithrix_jacchus
ENSAMXG00000008624	rsl1d1	89	39.785	ENSCJAG00000042606	-	78	40.103	Callithrix_jacchus
ENSAMXG00000008624	rsl1d1	97	36.725	ENSCAFG00000018865	RSL1D1	78	38.501	Canis_familiaris
ENSAMXG00000008624	rsl1d1	90	31.868	ENSCAFG00020002457	-	75	31.476	Canis_lupus_dingo
ENSAMXG00000008624	rsl1d1	97	38.000	ENSCAFG00020024488	-	79	39.062	Canis_lupus_dingo
ENSAMXG00000008624	rsl1d1	99	40.314	ENSCHIG00000009867	-	80	41.761	Capra_hircus
ENSAMXG00000008624	rsl1d1	98	39.747	ENSCHIG00000018658	-	77	39.791	Capra_hircus
ENSAMXG00000008624	rsl1d1	96	37.750	ENSTSYG00000009276	RSL1D1	75	38.736	Carlito_syrichta
ENSAMXG00000008624	rsl1d1	96	37.441	ENSCPOG00000010630	RSL1D1	78	39.835	Cavia_porcellus
ENSAMXG00000008624	rsl1d1	64	42.739	ENSCCAG00000025197	-	55	42.353	Cebus_capucinus
ENSAMXG00000008624	rsl1d1	89	38.889	ENSCCAG00000017391	-	77	38.760	Cebus_capucinus
ENSAMXG00000008624	rsl1d1	89	38.375	ENSCCAG00000031641	-	75	39.295	Cebus_capucinus
ENSAMXG00000008624	rsl1d1	83	37.322	ENSCATG00000031153	RSL1D1	79	38.484	Cercocebus_atys
ENSAMXG00000008624	rsl1d1	94	39.031	ENSCLAG00000010975	RSL1D1	81	40.052	Chinchilla_lanigera
ENSAMXG00000008624	rsl1d1	97	36.124	ENSCSAG00000008255	RSL1D1	77	36.788	Chlorocebus_sabaeus
ENSAMXG00000008624	rsl1d1	65	43.673	ENSCHOG00000010827	RSL1D1	50	43.673	Choloepus_hoffmanni
ENSAMXG00000008624	rsl1d1	68	53.333	ENSCPBG00000004564	RSL1D1	94	54.502	Chrysemys_picta_bellii
ENSAMXG00000008624	rsl1d1	61	31.278	ENSCING00000011810	-	100	31.278	Ciona_intestinalis
ENSAMXG00000008624	rsl1d1	99	35.566	ENSCANG00000029202	RSL1D1	82	37.975	Colobus_angolensis_palliatus
ENSAMXG00000008624	rsl1d1	63	50.000	ENSCGRG00001014989	Rsl1d1	83	42.473	Cricetulus_griseus_chok1gshd
ENSAMXG00000008624	rsl1d1	63	50.000	ENSCGRG00000001905	Rsl1d1	83	42.473	Cricetulus_griseus_crigri
ENSAMXG00000008624	rsl1d1	89	53.916	ENSCSEG00000019693	rsl1d1	92	53.039	Cynoglossus_semilaevis
ENSAMXG00000008624	rsl1d1	95	55.342	ENSCVAG00000000672	rsl1d1	92	56.286	Cyprinodon_variegatus
ENSAMXG00000008624	rsl1d1	92	62.571	ENSDARG00000055868	rsl1d1	88	62.139	Danio_rerio
ENSAMXG00000008624	rsl1d1	52	34.802	ENSDNOG00000047567	-	66	34.764	Dasypus_novemcinctus
ENSAMXG00000008624	rsl1d1	95	35.457	ENSDORG00000013432	-	82	35.754	Dipodomys_ordii
ENSAMXG00000008624	rsl1d1	64	45.643	ENSEBUG00000005400	-	58	45.455	Eptatretus_burgeri
ENSAMXG00000008624	rsl1d1	66	43.182	ENSEEUG00000015569	-	60	43.182	Erinaceus_europaeus
ENSAMXG00000008624	rsl1d1	91	58.944	ENSELUG00000019243	rsl1d1	94	58.651	Esox_lucius
ENSAMXG00000008624	rsl1d1	90	37.802	ENSFCAG00000010114	RSL1D1	76	39.142	Felis_catus
ENSAMXG00000008624	rsl1d1	83	46.450	ENSFALG00000003869	RSL1D1	68	48.476	Ficedula_albicollis
ENSAMXG00000008624	rsl1d1	96	39.642	ENSFDAG00000011414	RSL1D1	81	40.331	Fukomys_damarensis
ENSAMXG00000008624	rsl1d1	88	55.793	ENSFHEG00000017235	rsl1d1	89	54.913	Fundulus_heteroclitus
ENSAMXG00000008624	rsl1d1	67	55.777	ENSGMOG00000013048	rsl1d1	89	55.777	Gadus_morhua
ENSAMXG00000008624	rsl1d1	89	44.444	ENSGALG00000033690	RSL1D1	79	45.915	Gallus_gallus
ENSAMXG00000008624	rsl1d1	98	50.267	ENSGAFG00000020794	rsl1d1	87	53.488	Gambusia_affinis
ENSAMXG00000008624	rsl1d1	94	49.288	ENSGACG00000004483	rsl1d1	92	49.429	Gasterosteus_aculeatus
ENSAMXG00000008624	rsl1d1	93	37.056	ENSGGOG00000013463	RSL1D1	77	38.402	Gorilla_gorilla
ENSAMXG00000008624	rsl1d1	86	60.436	ENSHBUG00000001551	rsl1d1	94	57.349	Haplochromis_burtoni
ENSAMXG00000008624	rsl1d1	96	41.117	ENSHGLG00000006774	RSL1D1	81	41.504	Heterocephalus_glaber_female
ENSAMXG00000008624	rsl1d1	64	47.083	ENSHGLG00100017781	RSL1D1	81	41.504	Heterocephalus_glaber_male
ENSAMXG00000008624	rsl1d1	65	61.317	ENSHCOG00000015208	rsl1d1	87	54.012	Hippocampus_comes
ENSAMXG00000008624	rsl1d1	99	65.135	ENSIPUG00000001677	rsl1d1	93	64.903	Ictalurus_punctatus
ENSAMXG00000008624	rsl1d1	96	38.303	ENSJJAG00000012115	Rsl1d1	79	38.162	Jaculus_jaculus
ENSAMXG00000008624	rsl1d1	96	57.778	ENSKMAG00000021908	rsl1d1	91	59.184	Kryptolebias_marmoratus
ENSAMXG00000008624	rsl1d1	66	64.659	ENSLBEG00000001076	rsl1d1	95	55.056	Labrus_bergylta
ENSAMXG00000008624	rsl1d1	89	56.716	ENSLOCG00000007416	rsl1d1	75	56.418	Lepisosteus_oculatus
ENSAMXG00000008624	rsl1d1	91	41.370	ENSLAFG00000013664	RSL1D1	77	41.304	Loxodonta_africana
ENSAMXG00000008624	rsl1d1	97	35.849	ENSMFAG00000037288	RSL1D1	77	37.565	Macaca_fascicularis
ENSAMXG00000008624	rsl1d1	97	35.849	ENSMMUG00000019632	RSL1D1	99	49.682	Macaca_mulatta
ENSAMXG00000008624	rsl1d1	97	35.849	ENSMNEG00000044196	RSL1D1	77	37.565	Macaca_nemestrina
ENSAMXG00000008624	rsl1d1	97	36.170	ENSMLEG00000042058	RSL1D1	79	37.824	Mandrillus_leucophaeus
ENSAMXG00000008624	rsl1d1	98	56.216	ENSMAMG00000004385	rsl1d1	93	58.213	Mastacembelus_armatus
ENSAMXG00000008624	rsl1d1	86	59.190	ENSMZEG00005007150	rsl1d1	95	57.925	Maylandia_zebra
ENSAMXG00000008624	rsl1d1	90	43.417	ENSMGAG00000000863	RSL1D1	78	46.286	Meleagris_gallopavo
ENSAMXG00000008624	rsl1d1	98	39.709	ENSMICG00000008229	RSL1D1	78	40.979	Microcebus_murinus
ENSAMXG00000008624	rsl1d1	89	40.395	ENSMOCG00000017724	Rsl1d1	81	40.057	Microtus_ochrogaster
ENSAMXG00000008624	rsl1d1	84	52.532	ENSMMOG00000003730	rsl1d1	100	52.848	Mola_mola
ENSAMXG00000008624	rsl1d1	93	38.218	ENSMODG00000029494	-	55	45.148	Monodelphis_domestica
ENSAMXG00000008624	rsl1d1	82	43.293	ENSMODG00000004625	-	52	51.055	Monodelphis_domestica
ENSAMXG00000008624	rsl1d1	98	55.435	ENSMALG00000009531	rsl1d1	95	57.345	Monopterus_albus
ENSAMXG00000008624	rsl1d1	86	41.691	ENSMUSG00000005846	Rsl1d1	75	40.988	Mus_musculus
ENSAMXG00000008624	rsl1d1	97	38.228	MGP_PahariEiJ_G0016164	Rsl1d1	77	39.155	Mus_pahari
ENSAMXG00000008624	rsl1d1	86	41.691	MGP_SPRETEiJ_G0021352	Rsl1d1	75	41.691	Mus_spretus
ENSAMXG00000008624	rsl1d1	64	46.444	ENSMLUG00000000784	RSL1D1	70	39.429	Myotis_lucifugus
ENSAMXG00000008624	rsl1d1	89	37.088	ENSNGAG00000009086	-	78	37.017	Nannospalax_galili
ENSAMXG00000008624	rsl1d1	96	35.768	ENSNGAG00000013578	-	81	36.612	Nannospalax_galili
ENSAMXG00000008624	rsl1d1	85	58.934	ENSNBRG00000002777	rsl1d1	99	57.297	Neolamprologus_brichardi
ENSAMXG00000008624	rsl1d1	93	36.641	ENSNLEG00000010196	-	77	37.468	Nomascus_leucogenys
ENSAMXG00000008624	rsl1d1	64	45.000	ENSNLEG00000012149	-	72	41.877	Nomascus_leucogenys
ENSAMXG00000008624	rsl1d1	92	40.331	ENSOPRG00000004442	-	77	40.331	Ochotona_princeps
ENSAMXG00000008624	rsl1d1	85	58.307	ENSONIG00000019757	rsl1d1	98	57.637	Oreochromis_niloticus
ENSAMXG00000008624	rsl1d1	69	44.402	ENSOANG00000009408	-	61	44.402	Ornithorhynchus_anatinus
ENSAMXG00000008624	rsl1d1	93	38.298	ENSOCUG00000004751	RSL1D1	77	40.000	Oryctolagus_cuniculus
ENSAMXG00000008624	rsl1d1	96	52.646	ENSORLG00000002877	rsl1d1	97	52.078	Oryzias_latipes
ENSAMXG00000008624	rsl1d1	98	51.220	ENSORLG00020006636	rsl1d1	97	51.657	Oryzias_latipes_hni
ENSAMXG00000008624	rsl1d1	98	51.491	ENSORLG00015005427	rsl1d1	97	51.934	Oryzias_latipes_hsok
ENSAMXG00000008624	rsl1d1	89	55.723	ENSOMEG00000008036	rsl1d1	91	54.342	Oryzias_melastigma
ENSAMXG00000008624	rsl1d1	97	40.506	ENSOGAG00000015151	RSL1D1	50	47.347	Otolemur_garnettii
ENSAMXG00000008624	rsl1d1	99	38.537	ENSOARG00000006923	RSL1D1	78	40.160	Ovis_aries
ENSAMXG00000008624	rsl1d1	93	36.896	ENSPPAG00000039716	RSL1D1	77	38.243	Pan_paniscus
ENSAMXG00000008624	rsl1d1	84	38.286	ENSPPRG00000005220	RSL1D1	76	37.903	Panthera_pardus
ENSAMXG00000008624	rsl1d1	88	37.883	ENSPTIG00000005526	RSL1D1	75	39.276	Panthera_tigris_altaica
ENSAMXG00000008624	rsl1d1	93	36.641	ENSPTRG00000007777	RSL1D1	77	37.984	Pan_troglodytes
ENSAMXG00000008624	rsl1d1	97	35.849	ENSPANG00000023073	RSL1D1	77	37.565	Papio_anubis
ENSAMXG00000008624	rsl1d1	89	53.916	ENSPKIG00000022687	rsl1d1	83	54.079	Paramormyrops_kingsleyae
ENSAMXG00000008624	rsl1d1	83	47.892	ENSPSIG00000011642	RSL1D1	72	48.204	Pelodiscus_sinensis
ENSAMXG00000008624	rsl1d1	84	62.222	ENSPMGG00000022261	rsl1d1	100	62.857	Periophthalmus_magnuspinnatus
ENSAMXG00000008624	rsl1d1	63	47.257	ENSPEMG00000009523	Rsl1d1	83	40.106	Peromyscus_maniculatus_bairdii
ENSAMXG00000008624	rsl1d1	60	46.429	ENSPMAG00000005446	rsl1d1	60	43.060	Petromyzon_marinus
ENSAMXG00000008624	rsl1d1	82	46.452	ENSPCIG00000026851	-	75	46.580	Phascolarctos_cinereus
ENSAMXG00000008624	rsl1d1	83	54.079	ENSPFOG00000005017	rsl1d1	92	52.266	Poecilia_formosa
ENSAMXG00000008624	rsl1d1	97	50.806	ENSPLAG00000000482	rsl1d1	77	53.529	Poecilia_latipinna
ENSAMXG00000008624	rsl1d1	97	52.316	ENSPMEG00000007032	rsl1d1	86	54.438	Poecilia_mexicana
ENSAMXG00000008624	rsl1d1	87	51.515	ENSPREG00000016619	rsl1d1	81	51.662	Poecilia_reticulata
ENSAMXG00000008624	rsl1d1	93	37.260	ENSPPYG00000019335	-	79	37.746	Pongo_abelii
ENSAMXG00000008624	rsl1d1	93	36.641	ENSPPYG00000007112	RSL1D1	77	38.243	Pongo_abelii
ENSAMXG00000008624	rsl1d1	74	43.000	ENSPCAG00000011264	-	52	43.000	Procavia_capensis
ENSAMXG00000008624	rsl1d1	63	43.220	ENSPCOG00000022456	RSL1D1	65	41.221	Propithecus_coquereli
ENSAMXG00000008624	rsl1d1	64	46.862	ENSPVAG00000005014	RSL1D1	79	38.889	Pteropus_vampyrus
ENSAMXG00000008624	rsl1d1	86	59.813	ENSPNYG00000002850	rsl1d1	94	58.501	Pundamilia_nyererei
ENSAMXG00000008624	rsl1d1	97	72.928	ENSPNAG00000011848	rsl1d1	95	73.109	Pygocentrus_nattereri
ENSAMXG00000008624	rsl1d1	99	38.806	ENSRNOG00000048608	Rsl1d1l1	79	39.674	Rattus_norvegicus
ENSAMXG00000008624	rsl1d1	99	38.806	ENSRNOG00000061236	LOC108348298	79	39.674	Rattus_norvegicus
ENSAMXG00000008624	rsl1d1	97	35.377	ENSRBIG00000030317	RSL1D1	79	36.896	Rhinopithecus_bieti
ENSAMXG00000008624	rsl1d1	97	35.377	ENSRROG00000033658	RSL1D1	79	36.896	Rhinopithecus_roxellana
ENSAMXG00000008624	rsl1d1	67	32.867	ENSSBOG00000029329	-	66	33.564	Saimiri_boliviensis_boliviensis
ENSAMXG00000008624	rsl1d1	89	39.678	ENSSBOG00000035910	-	77	40.000	Saimiri_boliviensis_boliviensis
ENSAMXG00000008624	rsl1d1	89	37.802	ENSSBOG00000028384	-	76	38.667	Saimiri_boliviensis_boliviensis
ENSAMXG00000008624	rsl1d1	68	60.870	ENSSFOG00015011354	rsl1d1	73	60.870	Scleropages_formosus
ENSAMXG00000008624	rsl1d1	82	57.655	ENSSMAG00000007957	rsl1d1	93	56.286	Scophthalmus_maximus
ENSAMXG00000008624	rsl1d1	98	54.496	ENSSDUG00000008447	rsl1d1	85	55.908	Seriola_dumerili
ENSAMXG00000008624	rsl1d1	98	55.135	ENSSLDG00000008293	rsl1d1	98	54.595	Seriola_lalandi_dorsalis
ENSAMXG00000008624	rsl1d1	85	47.321	ENSSPUG00000007525	RSL1D1	73	48.214	Sphenodon_punctatus
ENSAMXG00000008624	rsl1d1	98	58.424	ENSSPAG00000009755	rsl1d1	91	61.111	Stegastes_partitus
ENSAMXG00000008624	rsl1d1	97	39.898	ENSSSCG00000023984	RSL1D1	74	39.314	Sus_scrofa
ENSAMXG00000008624	rsl1d1	64	53.942	ENSTGUG00000005174	RSL1D1	98	53.942	Taeniopygia_guttata
ENSAMXG00000008624	rsl1d1	98	50.000	ENSTRUG00000016970	rsl1d1	88	52.711	Takifugu_rubripes
ENSAMXG00000008624	rsl1d1	98	54.054	ENSTNIG00000012925	rsl1d1	99	54.054	Tetraodon_nigroviridis
ENSAMXG00000008624	rsl1d1	90	39.286	ENSTTRG00000011629	RSL1D1	77	39.566	Tursiops_truncatus
ENSAMXG00000008624	rsl1d1	97	37.696	ENSUAMG00000004470	RSL1D1	84	39.157	Ursus_americanus
ENSAMXG00000008624	rsl1d1	87	32.170	ENSUMAG00000003994	RSL1D1	80	35.326	Ursus_maritimus
ENSAMXG00000008624	rsl1d1	93	34.946	ENSVVUG00000024962	-	76	35.185	Vulpes_vulpes
ENSAMXG00000008624	rsl1d1	97	36.919	ENSVVUG00000018170	-	78	37.726	Vulpes_vulpes
ENSAMXG00000008624	rsl1d1	84	47.468	ENSXETG00000033365	-	71	49.221	Xenopus_tropicalis
ENSAMXG00000008624	rsl1d1	68	68.027	ENSXCOG00000003117	rsl1d1	99	68.027	Xiphophorus_couchianus
ENSAMXG00000008624	rsl1d1	67	62.550	ENSXMAG00000025111	rsl1d1	73	61.811	Xiphophorus_maculatus