EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008657 (Gene tree)
Gene ID: 103041651
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 213255 bases
Position: chr14:31764124-31977378
Accession: 103041651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008916	DRY_EERY	PF09750.9	9e-31	1	1
ENSAMXP00000008916	Surp	PF01805.20	1.4e-28	1	2
ENSAMXP00000008916	Surp	PF01805.20	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008916	-	5862	XM_022676513	ENSAMXP00000008916	976 (aa)	XP_022532234	W5KMV4

Gene Model

Click here to download ENSAMXG00000008657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008657	sfswap	76	86.047	ENSAPOG00000005784	sfswap	70	86.047	Acanthochromis_polyacanthus
ENSAMXG00000008657	sfswap	72	68.583	ENSAOCG00000016469	sfswap	70	67.832	Amphiprion_ocellaris
ENSAMXG00000008657	sfswap	72	68.636	ENSAPEG00000004965	sfswap	70	67.832	Amphiprion_percula
ENSAMXG00000008657	sfswap	72	67.742	ENSATEG00000021053	sfswap	74	66.760	Anabas_testudineus
ENSAMXG00000008657	sfswap	98	54.473	ENSAPLG00000013808	SFSWAP	88	59.350	Anas_platyrhynchos
ENSAMXG00000008657	sfswap	94	50.000	ENSACAG00000007220	SFSWAP	78	53.711	Anolis_carolinensis
ENSAMXG00000008657	sfswap	72	65.915	ENSACLG00000020159	sfswap	74	66.760	Astatotilapia_calliptera
ENSAMXG00000008657	sfswap	98	54.900	ENSBTAG00000000439	SFSWAP	77	57.328	Bos_taurus
ENSAMXG00000008657	sfswap	89	49.425	ENSCAFG00020011254	SFSWAP	73	50.711	Canis_lupus_dingo
ENSAMXG00000008657	sfswap	85	66.667	ENSCAPG00000004394	SFSWAP	74	55.495	Cavia_aperea
ENSAMXG00000008657	sfswap	76	65.875	ENSCHOG00000003578	SFSWAP	74	80.435	Choloepus_hoffmanni
ENSAMXG00000008657	sfswap	98	55.080	ENSCPBG00000024757	SFSWAP	73	57.455	Chrysemys_picta_bellii
ENSAMXG00000008657	sfswap	78	61.332	ENSCSEG00000003773	sfswap	74	61.772	Cynoglossus_semilaevis
ENSAMXG00000008657	sfswap	51	63.158	ENSCVAG00000001205	-	58	60.000	Cyprinodon_variegatus
ENSAMXG00000008657	sfswap	99	70.648	ENSDARG00000005980	sfswap	77	72.715	Danio_rerio
ENSAMXG00000008657	sfswap	98	52.751	ENSDNOG00000018742	SFSWAP	73	56.378	Dasypus_novemcinctus
ENSAMXG00000008657	sfswap	90	54.688	ENSDORG00000010352	Sfswap	77	49.677	Dipodomys_ordii
ENSAMXG00000008657	sfswap	51	46.565	FBgn0003638	su(w[a])	58	59.783	Drosophila_melanogaster
ENSAMXG00000008657	sfswap	55	78.947	ENSETEG00000016657	-	62	97.778	Echinops_telfairi
ENSAMXG00000008657	sfswap	77	43.051	ENSEBUG00000016748	SFSWAP	72	37.592	Eptatretus_burgeri
ENSAMXG00000008657	sfswap	74	54.122	ENSEEUG00000001713	SFSWAP	76	46.687	Erinaceus_europaeus
ENSAMXG00000008657	sfswap	100	60.019	ENSELUG00000010942	sfswap	93	59.689	Esox_lucius
ENSAMXG00000008657	sfswap	98	56.500	ENSFALG00000009577	SFSWAP	76	60.128	Ficedula_albicollis
ENSAMXG00000008657	sfswap	99	61.145	ENSGAFG00000006272	sfswap	74	65.881	Gambusia_affinis
ENSAMXG00000008657	sfswap	74	81.818	ENSGACG00000017647	sfswap	86	63.099	Gasterosteus_aculeatus
ENSAMXG00000008657	sfswap	72	66.056	ENSHBUG00000005629	sfswap	73	66.900	Haplochromis_burtoni
ENSAMXG00000008657	sfswap	72	65.266	ENSHCOG00000009475	sfswap	72	63.889	Hippocampus_comes
ENSAMXG00000008657	sfswap	99	73.727	ENSIPUG00000010598	sfswap	100	74.289	Ictalurus_punctatus
ENSAMXG00000008657	sfswap	72	66.713	ENSKMAG00000013168	sfswap	70	66.158	Kryptolebias_marmoratus
ENSAMXG00000008657	sfswap	82	58.012	ENSLBEG00000010239	sfswap	76	65.320	Labrus_bergylta
ENSAMXG00000008657	sfswap	72	57.182	ENSLACG00000018678	SFSWAP	72	57.916	Latimeria_chalumnae
ENSAMXG00000008657	sfswap	100	59.701	ENSLOCG00000006202	sfswap	100	57.369	Lepisosteus_oculatus
ENSAMXG00000008657	sfswap	51	51.272	ENSLAFG00000014462	SFSWAP	78	57.851	Loxodonta_africana
ENSAMXG00000008657	sfswap	96	54.776	ENSMFAG00000037352	SFSWAP	73	56.941	Macaca_fascicularis
ENSAMXG00000008657	sfswap	98	55.323	ENSMMUG00000020343	SFSWAP	76	56.941	Macaca_mulatta
ENSAMXG00000008657	sfswap	98	55.323	ENSMNEG00000041002	SFSWAP	76	56.941	Macaca_nemestrina
ENSAMXG00000008657	sfswap	74	66.937	ENSMAMG00000006631	sfswap	75	66.040	Mastacembelus_armatus
ENSAMXG00000008657	sfswap	72	65.915	ENSMZEG00005017834	SFSWAP	70	66.760	Maylandia_zebra
ENSAMXG00000008657	sfswap	85	62.798	ENSMODG00000015581	SFSWAP	86	63.636	Monodelphis_domestica
ENSAMXG00000008657	sfswap	76	84.091	ENSMALG00000012603	sfswap	89	65.139	Monopterus_albus
ENSAMXG00000008657	sfswap	67	66.819	ENSNBRG00000020857	sfswap	68	67.629	Neolamprologus_brichardi
ENSAMXG00000008657	sfswap	67	78.571	ENSMEUG00000009556	-	52	75.862	Notamacropus_eugenii
ENSAMXG00000008657	sfswap	66	61.787	ENSOPRG00000006983	-	73	60.317	Ochotona_princeps
ENSAMXG00000008657	sfswap	87	65.668	ENSONIG00000003757	sfswap	76	83.721	Oreochromis_niloticus
ENSAMXG00000008657	sfswap	72	66.433	ENSORLG00000010983	sfswap	72	65.278	Oryzias_latipes
ENSAMXG00000008657	sfswap	72	66.994	ENSORLG00020010779	sfswap	71	65.833	Oryzias_latipes_hni
ENSAMXG00000008657	sfswap	72	66.900	ENSORLG00015023093	sfswap	72	65.049	Oryzias_latipes_hsok
ENSAMXG00000008657	sfswap	72	66.292	ENSOMEG00000022065	sfswap	71	65.266	Oryzias_melastigma
ENSAMXG00000008657	sfswap	98	53.780	ENSPPRG00000017318	SFSWAP	73	56.154	Panthera_pardus
ENSAMXG00000008657	sfswap	88	68.267	ENSPTIG00000004304	SFSWAP	75	67.532	Panthera_tigris_altaica
ENSAMXG00000008657	sfswap	50	68.407	ENSPTRG00000005640	SFSWAP	79	56.923	Pan_troglodytes
ENSAMXG00000008657	sfswap	73	65.211	ENSPKIG00000008327	sfswap	78	64.675	Paramormyrops_kingsleyae
ENSAMXG00000008657	sfswap	72	66.152	ENSPFOG00000019657	sfswap	72	65.374	Poecilia_formosa
ENSAMXG00000008657	sfswap	72	66.292	ENSPLAG00000008513	sfswap	72	65.512	Poecilia_latipinna
ENSAMXG00000008657	sfswap	72	66.152	ENSPMEG00000008716	sfswap	72	65.374	Poecilia_mexicana
ENSAMXG00000008657	sfswap	72	65.590	ENSPREG00000006692	sfswap	72	64.820	Poecilia_reticulata
ENSAMXG00000008657	sfswap	73	65.722	ENSPVAG00000014918	SFSWAP	64	61.377	Pteropus_vampyrus
ENSAMXG00000008657	sfswap	99	84.908	ENSPNAG00000007073	sfswap	100	84.836	Pygocentrus_nattereri
ENSAMXG00000008657	sfswap	98	54.416	ENSRBIG00000036330	SFSWAP	75	55.805	Rhinopithecus_bieti
ENSAMXG00000008657	sfswap	73	69.191	ENSSBOG00000026217	SFSWAP	84	59.350	Saimiri_boliviensis_boliviensis
ENSAMXG00000008657	sfswap	94	55.137	ENSSHAG00000014232	SFSWAP	78	56.225	Sarcophilus_harrisii
ENSAMXG00000008657	sfswap	97	62.767	ENSSFOG00015000766	sfswap	100	61.615	Scleropages_formosus
ENSAMXG00000008657	sfswap	72	67.278	ENSSMAG00000018718	sfswap	70	65.503	Scophthalmus_maximus
ENSAMXG00000008657	sfswap	72	68.539	ENSSDUG00000021680	sfswap	69	68.011	Seriola_dumerili
ENSAMXG00000008657	sfswap	72	68.539	ENSSLDG00000010835	sfswap	73	83.721	Seriola_lalandi_dorsalis
ENSAMXG00000008657	sfswap	72	69.663	ENSSPAG00000014310	sfswap	72	68.539	Stegastes_partitus
ENSAMXG00000008657	sfswap	63	62.759	ENSSSCG00000009744	SFSWAP	84	59.167	Sus_scrofa
ENSAMXG00000008657	sfswap	98	56.287	ENSTGUG00000004623	SFSWAP	91	60.163	Taeniopygia_guttata
ENSAMXG00000008657	sfswap	87	67.617	ENSTTRG00000013478	SFSWAP	73	81.395	Tursiops_truncatus
ENSAMXG00000008657	sfswap	98	52.870	ENSUAMG00000016807	SFSWAP	76	56.380	Ursus_americanus
ENSAMXG00000008657	sfswap	73	67.042	ENSUMAG00000002957	SFSWAP	75	68.232	Ursus_maritimus
ENSAMXG00000008657	sfswap	90	63.889	ENSXETG00000009350	sfswap	96	55.311	Xenopus_tropicalis
ENSAMXG00000008657	sfswap	72	65.922	ENSXMAG00000009020	sfswap	72	65.465	Xiphophorus_maculatus