EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008707 (Gene tree)
Gene ID: 103026219
Gene Symbol: tnrc6b
Alias: fa01f05|fb21h03|fc23h10|hm:zeh0114|im:6968518|wu:fa01f05|wu:fb21h03|wu:fc23h10
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12357 bases
Position: chr4:17326873-17339229
Accession: 103026219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008969	Ago_hook	PF10427.9	7.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008969	-	5907	XM_022669215	ENSAMXP00000008969	1968 (aa)	XP_022524936	W5KN07

Gene Model

Click here to download ENSAMXG00000008707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008707	tnrc6b	82	44.377	ENSG00000100354	TNRC6B	89	63.953	Homo_sapiens
ENSAMXG00000008707	tnrc6b	91	43.149	ENSAMEG00000011025	TNRC6B	53	45.479	Ailuropoda_melanoleuca
ENSAMXG00000008707	tnrc6b	76	47.844	ENSAPLG00000009347	TNRC6B	66	47.284	Anas_platyrhynchos
ENSAMXG00000008707	tnrc6b	81	72.059	ENSACAG00000007281	TNRC6B	66	70.423	Anolis_carolinensis
ENSAMXG00000008707	tnrc6b	85	47.149	ENSANAG00000035042	TNRC6B	89	63.953	Aotus_nancymaae
ENSAMXG00000008707	tnrc6b	86	46.558	ENSBTAG00000021076	TNRC6B	85	47.851	Bos_taurus
ENSAMXG00000008707	tnrc6b	66	66.409	ENSCJAG00000002732	TNRC6B	89	63.953	Callithrix_jacchus
ENSAMXG00000008707	tnrc6b	84	46.352	ENSCAFG00000001255	TNRC6B	86	45.668	Canis_familiaris
ENSAMXG00000008707	tnrc6b	82	47.059	ENSCAFG00020002189	TNRC6B	87	45.567	Canis_lupus_dingo
ENSAMXG00000008707	tnrc6b	82	46.830	ENSCHIG00000003491	TNRC6B	52	47.755	Capra_hircus
ENSAMXG00000008707	tnrc6b	92	37.694	ENSTSYG00000011836	TNRC6B	89	63.953	Carlito_syrichta
ENSAMXG00000008707	tnrc6b	82	46.293	ENSCPOG00000005705	TNRC6B	86	47.574	Cavia_porcellus
ENSAMXG00000008707	tnrc6b	82	46.063	ENSCCAG00000019912	TNRC6B	89	63.953	Cebus_capucinus
ENSAMXG00000008707	tnrc6b	82	47.059	ENSCATG00000029291	TNRC6B	89	63.953	Cercocebus_atys
ENSAMXG00000008707	tnrc6b	82	46.140	ENSCLAG00000016942	TNRC6B	83	47.760	Chinchilla_lanigera
ENSAMXG00000008707	tnrc6b	82	43.151	ENSCSAG00000006021	TNRC6B	85	44.204	Chlorocebus_sabaeus
ENSAMXG00000008707	tnrc6b	83	43.523	ENSCPBG00000022932	TNRC6B	70	47.072	Chrysemys_picta_bellii
ENSAMXG00000008707	tnrc6b	91	38.246	ENSCANG00000030776	TNRC6B	89	63.953	Colobus_angolensis_palliatus
ENSAMXG00000008707	tnrc6b	97	44.619	ENSCGRG00000016696	Tnrc6b	52	47.474	Cricetulus_griseus_crigri
ENSAMXG00000008707	tnrc6b	84	46.933	ENSDNOG00000012744	TNRC6B	85	47.905	Dasypus_novemcinctus
ENSAMXG00000008707	tnrc6b	97	44.567	ENSDORG00000003386	Tnrc6b	84	47.474	Dipodomys_ordii
ENSAMXG00000008707	tnrc6b	89	39.117	ENSETEG00000006570	TNRC6B	59	66.667	Echinops_telfairi
ENSAMXG00000008707	tnrc6b	82	46.968	ENSEASG00005005306	TNRC6B	82	48.069	Equus_asinus_asinus
ENSAMXG00000008707	tnrc6b	79	81.250	ENSECAG00000009759	TNRC6B	85	46.272	Equus_caballus
ENSAMXG00000008707	tnrc6b	82	46.931	ENSFCAG00000004791	TNRC6B	51	47.909	Felis_catus
ENSAMXG00000008707	tnrc6b	83	45.295	ENSFALG00000012195	TNRC6B	68	48.299	Ficedula_albicollis
ENSAMXG00000008707	tnrc6b	82	46.140	ENSFDAG00000021368	TNRC6B	84	47.569	Fukomys_damarensis
ENSAMXG00000008707	tnrc6b	98	39.466	ENSGALG00000012050	TNRC6B	66	47.710	Gallus_gallus
ENSAMXG00000008707	tnrc6b	92	38.364	ENSGAGG00000025188	TNRC6B	71	47.673	Gopherus_agassizii
ENSAMXG00000008707	tnrc6b	82	46.968	ENSGGOG00000008444	TNRC6B	89	63.953	Gorilla_gorilla
ENSAMXG00000008707	tnrc6b	91	38.722	ENSHGLG00000009306	TNRC6B	55	45.225	Heterocephalus_glaber_female
ENSAMXG00000008707	tnrc6b	82	45.833	ENSHGLG00100018108	TNRC6B	51	47.664	Heterocephalus_glaber_male
ENSAMXG00000008707	tnrc6b	99	78.575	ENSIPUG00000001515	tnrc6b	99	78.597	Ictalurus_punctatus
ENSAMXG00000008707	tnrc6b	91	44.602	ENSSTOG00000008927	TNRC6B	84	47.283	Ictidomys_tridecemlineatus
ENSAMXG00000008707	tnrc6b	91	44.885	ENSJJAG00000015779	Tnrc6b	51	47.913	Jaculus_jaculus
ENSAMXG00000008707	tnrc6b	74	43.444	ENSLACG00000000628	-	69	40.660	Latimeria_chalumnae
ENSAMXG00000008707	tnrc6b	59	46.776	ENSLAFG00000014473	TNRC6B	99	47.577	Loxodonta_africana
ENSAMXG00000008707	tnrc6b	82	47.059	ENSMFAG00000003862	TNRC6B	89	63.953	Macaca_fascicularis
ENSAMXG00000008707	tnrc6b	82	47.059	ENSMMUG00000021345	TNRC6B	89	63.953	Macaca_mulatta
ENSAMXG00000008707	tnrc6b	82	47.059	ENSMNEG00000042745	TNRC6B	86	48.141	Macaca_nemestrina
ENSAMXG00000008707	tnrc6b	82	47.059	ENSMLEG00000041780	TNRC6B	89	63.953	Mandrillus_leucophaeus
ENSAMXG00000008707	tnrc6b	93	39.659	ENSMGAG00000012333	TNRC6B	69	45.298	Meleagris_gallopavo
ENSAMXG00000008707	tnrc6b	92	43.602	ENSMAUG00000016123	Tnrc6b	51	47.474	Mesocricetus_auratus
ENSAMXG00000008707	tnrc6b	82	46.968	ENSMICG00000014056	TNRC6B	83	47.961	Microcebus_murinus
ENSAMXG00000008707	tnrc6b	93	49.813	ENSMOCG00000020334	Tnrc6b	50	45.525	Microtus_ochrogaster
ENSAMXG00000008707	tnrc6b	97	44.018	MGP_CAROLIEiJ_G0020043	Tnrc6b	51	47.569	Mus_caroli
ENSAMXG00000008707	tnrc6b	97	44.819	ENSMUSG00000047888	Tnrc6b	87	47.747	Mus_musculus
ENSAMXG00000008707	tnrc6b	97	44.402	MGP_PahariEiJ_G0020045	Tnrc6b	51	47.760	Mus_pahari
ENSAMXG00000008707	tnrc6b	97	44.898	MGP_SPRETEiJ_G0020941	Tnrc6b	51	47.760	Mus_spretus
ENSAMXG00000008707	tnrc6b	82	44.000	ENSMLUG00000008765	TNRC6B	86	45.701	Myotis_lucifugus
ENSAMXG00000008707	tnrc6b	92	44.168	ENSNGAG00000021294	Tnrc6b	84	47.624	Nannospalax_galili
ENSAMXG00000008707	tnrc6b	66	47.987	ENSNLEG00000015311	TNRC6B	89	63.953	Nomascus_leucogenys
ENSAMXG00000008707	tnrc6b	82	46.154	ENSODEG00000013146	TNRC6B	84	47.714	Octodon_degus
ENSAMXG00000008707	tnrc6b	82	46.612	ENSOCUG00000016128	TNRC6B	51	47.760	Oryctolagus_cuniculus
ENSAMXG00000008707	tnrc6b	82	44.801	ENSOGAG00000011096	TNRC6B	85	45.750	Otolemur_garnettii
ENSAMXG00000008707	tnrc6b	82	46.528	ENSOARG00000017238	TNRC6B	51	47.624	Ovis_aries
ENSAMXG00000008707	tnrc6b	82	46.968	ENSPPAG00000028514	TNRC6B	89	63.953	Pan_paniscus
ENSAMXG00000008707	tnrc6b	82	44.550	ENSPPRG00000017741	TNRC6B	89	63.953	Panthera_pardus
ENSAMXG00000008707	tnrc6b	84	42.794	ENSPTIG00000022064	TNRC6B	75	79.032	Panthera_tigris_altaica
ENSAMXG00000008707	tnrc6b	82	47.240	ENSPTRG00000047826	TNRC6B	89	63.953	Pan_troglodytes
ENSAMXG00000008707	tnrc6b	79	45.431	ENSPANG00000009271	TNRC6B	84	79.032	Papio_anubis
ENSAMXG00000008707	tnrc6b	97	43.878	ENSPEMG00000011403	Tnrc6b	84	47.383	Peromyscus_maniculatus_bairdii
ENSAMXG00000008707	tnrc6b	68	46.619	ENSPCIG00000020347	TNRC6B	68	48.053	Phascolarctos_cinereus
ENSAMXG00000008707	tnrc6b	90	60.638	ENSPFOG00000006033	-	69	61.050	Poecilia_formosa
ENSAMXG00000008707	tnrc6b	97	53.377	ENSPLAG00000001418	-	99	52.146	Poecilia_latipinna
ENSAMXG00000008707	tnrc6b	87	51.277	ENSPMEG00000006371	-	60	63.043	Poecilia_mexicana
ENSAMXG00000008707	tnrc6b	67	51.279	ENSPPYG00000011849	TNRC6B	84	48.176	Pongo_abelii
ENSAMXG00000008707	tnrc6b	57	47.397	ENSPCAG00000008739	TNRC6B	72	43.968	Procavia_capensis
ENSAMXG00000008707	tnrc6b	85	46.168	ENSPCOG00000020790	TNRC6B	83	47.961	Propithecus_coquereli
ENSAMXG00000008707	tnrc6b	65	52.427	ENSPVAG00000004975	TNRC6B	76	51.383	Pteropus_vampyrus
ENSAMXG00000008707	tnrc6b	91	81.360	ENSPNAG00000011713	tnrc6b	98	80.392	Pygocentrus_nattereri
ENSAMXG00000008707	tnrc6b	97	44.384	ENSRNOG00000024907	Tnrc6b	51	47.493	Rattus_norvegicus
ENSAMXG00000008707	tnrc6b	82	46.691	ENSRBIG00000035576	TNRC6B	90	63.953	Rhinopithecus_bieti
ENSAMXG00000008707	tnrc6b	82	46.782	ENSRROG00000031135	TNRC6B	89	63.953	Rhinopithecus_roxellana
ENSAMXG00000008707	tnrc6b	82	44.464	ENSSBOG00000029743	TNRC6B	89	79.032	Saimiri_boliviensis_boliviensis
ENSAMXG00000008707	tnrc6b	84	43.361	ENSSHAG00000009692	TNRC6B	65	46.914	Sarcophilus_harrisii
ENSAMXG00000008707	tnrc6b	60	42.449	ENSSPUG00000010801	TNRC6B	71	45.863	Sphenodon_punctatus
ENSAMXG00000008707	tnrc6b	82	46.830	ENSSSCG00000000078	TNRC6B	85	48.092	Sus_scrofa
ENSAMXG00000008707	tnrc6b	66	50.909	ENSTGUG00000010138	-	61	50.854	Taeniopygia_guttata
ENSAMXG00000008707	tnrc6b	81	47.783	ENSTTRG00000011465	TNRC6B	82	45.865	Tursiops_truncatus
ENSAMXG00000008707	tnrc6b	85	47.059	ENSUAMG00000007174	TNRC6B	83	48.069	Ursus_americanus
ENSAMXG00000008707	tnrc6b	82	47.240	ENSUMAG00000014336	TNRC6B	54	48.141	Ursus_maritimus
ENSAMXG00000008707	tnrc6b	50	45.139	ENSVPAG00000001467	TNRC6B	64	68.333	Vicugna_pacos
ENSAMXG00000008707	tnrc6b	84	46.768	ENSVVUG00000007064	TNRC6B	86	46.463	Vulpes_vulpes
ENSAMXG00000008707	tnrc6b	84	51.977	ENSXCOG00000003042	-	97	51.679	Xiphophorus_couchianus