EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008710 (Gene tree)
Gene ID: 103043305
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9073 bases
Position: chr14:31385918-31394990
Accession: 103043305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000008945	PseudoU_synth_1	PF01416.20	9.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000008945	-	2234	XM_007246049	ENSAMXP00000008945	431 (aa)	XP_007246111	W5KMY3

Gene Model

Click here to download ENSAMXG00000008710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008710	pus1	80	72.093	ENSG00000177192	PUS1	89	72.093	Homo_sapiens
ENSAMXG00000008710	pus1	89	73.990	ENSAPOG00000007254	pus1	93	73.990	Acanthochromis_polyacanthus
ENSAMXG00000008710	pus1	81	69.405	ENSAMEG00000013715	PUS1	86	69.405	Ailuropoda_melanoleuca
ENSAMXG00000008710	pus1	92	73.067	ENSACIG00000009169	pus1	97	73.067	Amphilophus_citrinellus
ENSAMXG00000008710	pus1	89	75.253	ENSAOCG00000022207	pus1	93	75.253	Amphiprion_ocellaris
ENSAMXG00000008710	pus1	89	75.253	ENSAPEG00000006039	pus1	100	75.253	Amphiprion_percula
ENSAMXG00000008710	pus1	86	75.196	ENSATEG00000020688	pus1	97	75.196	Anabas_testudineus
ENSAMXG00000008710	pus1	81	72.206	ENSACAG00000007367	PUS1	94	72.206	Anolis_carolinensis
ENSAMXG00000008710	pus1	70	72.093	ENSANAG00000036192	PUS1	92	72.093	Aotus_nancymaae
ENSAMXG00000008710	pus1	87	74.479	ENSACLG00000020868	pus1	97	74.479	Astatotilapia_calliptera
ENSAMXG00000008710	pus1	81	69.516	ENSBTAG00000012990	PUS1	88	69.516	Bos_taurus
ENSAMXG00000008710	pus1	77	39.244	WBGene00004248	pus-1	81	39.244	Caenorhabditis_elegans
ENSAMXG00000008710	pus1	59	70.356	ENSCJAG00000003720	PUS1	70	70.312	Callithrix_jacchus
ENSAMXG00000008710	pus1	80	69.164	ENSCAFG00000006429	PUS1	87	69.164	Canis_familiaris
ENSAMXG00000008710	pus1	80	69.164	ENSCAFG00020010737	PUS1	81	69.164	Canis_lupus_dingo
ENSAMXG00000008710	pus1	80	70.349	ENSCHIG00000000487	PUS1	88	69.231	Capra_hircus
ENSAMXG00000008710	pus1	79	71.429	ENSTSYG00000032605	PUS1	93	71.387	Carlito_syrichta
ENSAMXG00000008710	pus1	69	73.826	ENSCAPG00000006421	PUS1	99	70.625	Cavia_aperea
ENSAMXG00000008710	pus1	74	74.143	ENSCPOG00000001027	PUS1	76	74.074	Cavia_porcellus
ENSAMXG00000008710	pus1	87	63.476	ENSCCAG00000015879	PUS1	93	63.500	Cebus_capucinus
ENSAMXG00000008710	pus1	88	63.250	ENSCATG00000032870	PUS1	93	63.250	Cercocebus_atys
ENSAMXG00000008710	pus1	79	70.381	ENSCLAG00000011689	PUS1	87	66.938	Chinchilla_lanigera
ENSAMXG00000008710	pus1	88	63.500	ENSCSAG00000001879	PUS1	93	63.500	Chlorocebus_sabaeus
ENSAMXG00000008710	pus1	73	73.163	ENSCPBG00000024715	PUS1	92	71.605	Chrysemys_picta_bellii
ENSAMXG00000008710	pus1	76	46.012	ENSCING00000009426	-	87	46.012	Ciona_intestinalis
ENSAMXG00000008710	pus1	77	42.771	ENSCSAVG00000003751	-	68	42.771	Ciona_savignyi
ENSAMXG00000008710	pus1	80	62.791	ENSCANG00000035561	PUS1	83	66.118	Colobus_angolensis_palliatus
ENSAMXG00000008710	pus1	81	71.470	ENSCGRG00001019592	Pus1	82	71.470	Cricetulus_griseus_chok1gshd
ENSAMXG00000008710	pus1	81	71.470	ENSCGRG00000004048	Pus1	88	71.470	Cricetulus_griseus_crigri
ENSAMXG00000008710	pus1	88	70.341	ENSCSEG00000003629	pus1	93	69.231	Cynoglossus_semilaevis
ENSAMXG00000008710	pus1	90	72.959	ENSCVAG00000001265	pus1	93	72.959	Cyprinodon_variegatus
ENSAMXG00000008710	pus1	87	78.667	ENSDARG00000045562	pus1	97	82.657	Danio_rerio
ENSAMXG00000008710	pus1	89	60.988	ENSDNOG00000045576	PUS1	95	69.903	Dasypus_novemcinctus
ENSAMXG00000008710	pus1	70	74.086	ENSDORG00000011455	Pus1	92	74.086	Dipodomys_ordii
ENSAMXG00000008710	pus1	78	46.418	FBgn0038811	PUS1	84	46.418	Drosophila_melanogaster
ENSAMXG00000008710	pus1	79	72.141	ENSETEG00000019160	PUS1	84	71.802	Echinops_telfairi
ENSAMXG00000008710	pus1	78	41.944	ENSEBUG00000000368	-	67	41.758	Eptatretus_burgeri
ENSAMXG00000008710	pus1	80	71.884	ENSEASG00005016535	PUS1	80	71.884	Equus_asinus_asinus
ENSAMXG00000008710	pus1	80	71.884	ENSECAG00000006965	PUS1	87	71.884	Equus_caballus
ENSAMXG00000008710	pus1	89	77.179	ENSELUG00000010424	pus1	99	77.179	Esox_lucius
ENSAMXG00000008710	pus1	80	71.221	ENSFCAG00000010780	PUS1	81	71.221	Felis_catus
ENSAMXG00000008710	pus1	84	70.924	ENSFALG00000008273	PUS1	86	70.924	Ficedula_albicollis
ENSAMXG00000008710	pus1	84	68.120	ENSFDAG00000012518	PUS1	98	63.772	Fukomys_damarensis
ENSAMXG00000008710	pus1	91	72.727	ENSFHEG00000010504	pus1	95	72.727	Fundulus_heteroclitus
ENSAMXG00000008710	pus1	86	71.505	ENSGMOG00000008143	pus1	96	71.505	Gadus_morhua
ENSAMXG00000008710	pus1	86	68.074	ENSGALG00000002354	PUS1	93	68.074	Gallus_gallus
ENSAMXG00000008710	pus1	92	72.569	ENSGAFG00000006578	pus1	96	72.569	Gambusia_affinis
ENSAMXG00000008710	pus1	89	71.939	ENSGACG00000017566	pus1	100	71.939	Gasterosteus_aculeatus
ENSAMXG00000008710	pus1	75	70.062	ENSGAGG00000016730	-	93	70.062	Gopherus_agassizii
ENSAMXG00000008710	pus1	80	72.384	ENSGGOG00000009178	PUS1	81	73.597	Gorilla_gorilla
ENSAMXG00000008710	pus1	87	75.000	ENSHBUG00000001316	pus1	97	75.000	Haplochromis_burtoni
ENSAMXG00000008710	pus1	84	66.667	ENSHGLG00000016086	PUS1	93	66.667	Heterocephalus_glaber_female
ENSAMXG00000008710	pus1	84	66.393	ENSHGLG00100019362	PUS1	93	66.393	Heterocephalus_glaber_male
ENSAMXG00000008710	pus1	96	69.398	ENSHCOG00000014288	pus1	95	69.398	Hippocampus_comes
ENSAMXG00000008710	pus1	100	79.814	ENSIPUG00000010387	pus1	100	79.814	Ictalurus_punctatus
ENSAMXG00000008710	pus1	80	71.802	ENSSTOG00000011245	PUS1	81	71.802	Ictidomys_tridecemlineatus
ENSAMXG00000008710	pus1	80	72.384	ENSJJAG00000000088	Pus1	81	72.384	Jaculus_jaculus
ENSAMXG00000008710	pus1	86	73.107	ENSKMAG00000012702	pus1	91	73.107	Kryptolebias_marmoratus
ENSAMXG00000008710	pus1	86	74.074	ENSLBEG00000002845	pus1	93	74.074	Labrus_bergylta
ENSAMXG00000008710	pus1	83	68.508	ENSLACG00000018598	PUS1	94	66.755	Latimeria_chalumnae
ENSAMXG00000008710	pus1	75	57.895	ENSLACG00000016044	-	98	57.895	Latimeria_chalumnae
ENSAMXG00000008710	pus1	86	71.842	ENSLOCG00000006127	pus1	96	71.842	Lepisosteus_oculatus
ENSAMXG00000008710	pus1	80	69.767	ENSLAFG00000028731	PUS1	92	69.767	Loxodonta_africana
ENSAMXG00000008710	pus1	80	70.930	ENSMFAG00000041194	PUS1	85	70.930	Macaca_fascicularis
ENSAMXG00000008710	pus1	80	71.221	ENSMMUG00000031463	PUS1	89	71.221	Macaca_mulatta
ENSAMXG00000008710	pus1	88	63.500	ENSMNEG00000002814	PUS1	93	63.500	Macaca_nemestrina
ENSAMXG00000008710	pus1	70	72.757	ENSMLEG00000043560	PUS1	92	72.757	Mandrillus_leucophaeus
ENSAMXG00000008710	pus1	89	72.704	ENSMAMG00000007371	pus1	93	72.704	Mastacembelus_armatus
ENSAMXG00000008710	pus1	87	74.740	ENSMZEG00005017746	pus1	90	74.740	Maylandia_zebra
ENSAMXG00000008710	pus1	57	31.227	ENSMGAG00000000851	PUS3	63	31.227	Meleagris_gallopavo
ENSAMXG00000008710	pus1	74	71.340	ENSMGAG00000001958	PUS1	98	71.340	Meleagris_gallopavo
ENSAMXG00000008710	pus1	81	72.046	ENSMAUG00000001482	Pus1	82	72.046	Mesocricetus_auratus
ENSAMXG00000008710	pus1	84	66.667	ENSMICG00000030980	PUS1	92	66.667	Microcebus_murinus
ENSAMXG00000008710	pus1	81	71.758	ENSMOCG00000022311	Pus1	82	71.758	Microtus_ochrogaster
ENSAMXG00000008710	pus1	86	74.194	ENSMMOG00000021022	pus1	96	73.600	Mola_mola
ENSAMXG00000008710	pus1	79	69.027	ENSMODG00000015551	PUS1	80	66.851	Monodelphis_domestica
ENSAMXG00000008710	pus1	90	72.519	ENSMALG00000013202	pus1	92	73.438	Monopterus_albus
ENSAMXG00000008710	pus1	81	72.046	MGP_CAROLIEiJ_G0027551	Pus1	88	72.046	Mus_caroli
ENSAMXG00000008710	pus1	81	72.046	ENSMUSG00000029507	Pus1	88	72.046	Mus_musculus
ENSAMXG00000008710	pus1	81	72.046	MGP_PahariEiJ_G0024133	Pus1	88	72.046	Mus_pahari
ENSAMXG00000008710	pus1	81	72.046	MGP_SPRETEiJ_G0028549	Pus1	88	72.046	Mus_spretus
ENSAMXG00000008710	pus1	75	72.222	ENSMPUG00000002314	PUS1	82	72.222	Mustela_putorius_furo
ENSAMXG00000008710	pus1	83	66.854	ENSMLUG00000015790	PUS1	98	66.854	Myotis_lucifugus
ENSAMXG00000008710	pus1	80	72.093	ENSNGAG00000012976	Pus1	81	72.093	Nannospalax_galili
ENSAMXG00000008710	pus1	87	76.053	ENSNBRG00000020502	pus1	96	78.992	Neolamprologus_brichardi
ENSAMXG00000008710	pus1	80	69.186	ENSNLEG00000008505	PUS1	92	72.603	Nomascus_leucogenys
ENSAMXG00000008710	pus1	80	61.224	ENSMEUG00000002825	PUS1	92	61.224	Notamacropus_eugenii
ENSAMXG00000008710	pus1	81	60.632	ENSOPRG00000002701	-	91	60.632	Ochotona_princeps
ENSAMXG00000008710	pus1	80	70.930	ENSODEG00000008248	PUS1	85	74.074	Octodon_degus
ENSAMXG00000008710	pus1	90	72.431	ENSONIG00000003803	pus1	100	72.431	Oreochromis_niloticus
ENSAMXG00000008710	pus1	83	68.524	ENSOANG00000010619	PUS1	83	68.320	Ornithorhynchus_anatinus
ENSAMXG00000008710	pus1	79	70.381	ENSOCUG00000007310	PUS1	75	70.058	Oryctolagus_cuniculus
ENSAMXG00000008710	pus1	94	68.193	ENSORLG00000010787	pus1	99	68.193	Oryzias_latipes
ENSAMXG00000008710	pus1	94	68.916	ENSORLG00020011483	pus1	99	68.916	Oryzias_latipes_hni
ENSAMXG00000008710	pus1	94	69.157	ENSORLG00015023012	pus1	97	73.740	Oryzias_latipes_hsok
ENSAMXG00000008710	pus1	88	74.670	ENSOMEG00000022655	pus1	89	74.670	Oryzias_melastigma
ENSAMXG00000008710	pus1	79	71.554	ENSOGAG00000008720	PUS1	95	68.392	Otolemur_garnettii
ENSAMXG00000008710	pus1	85	66.393	ENSOARG00000013316	PUS1	84	66.393	Ovis_aries
ENSAMXG00000008710	pus1	80	72.384	ENSPPAG00000040971	PUS1	81	73.597	Pan_paniscus
ENSAMXG00000008710	pus1	80	71.221	ENSPPRG00000015456	PUS1	87	71.221	Panthera_pardus
ENSAMXG00000008710	pus1	79	71.053	ENSPTIG00000004201	PUS1	89	71.221	Panthera_tigris_altaica
ENSAMXG00000008710	pus1	80	72.384	ENSPTRG00000005643	PUS1	81	73.597	Pan_troglodytes
ENSAMXG00000008710	pus1	88	63.500	ENSPANG00000000376	PUS1	93	63.500	Papio_anubis
ENSAMXG00000008710	pus1	87	71.204	ENSPKIG00000019369	pus1	91	69.750	Paramormyrops_kingsleyae
ENSAMXG00000008710	pus1	81	71.714	ENSPSIG00000016432	PUS1	82	71.714	Pelodiscus_sinensis
ENSAMXG00000008710	pus1	85	76.630	ENSPMGG00000004522	pus1	95	76.630	Periophthalmus_magnuspinnatus
ENSAMXG00000008710	pus1	81	71.758	ENSPEMG00000013448	Pus1	82	71.758	Peromyscus_maniculatus_bairdii
ENSAMXG00000008710	pus1	75	60.185	ENSPMAG00000004636	pus1	98	60.185	Petromyzon_marinus
ENSAMXG00000008710	pus1	70	61.000	ENSPCIG00000022609	-	74	59.236	Phascolarctos_cinereus
ENSAMXG00000008710	pus1	97	69.431	ENSPFOG00000019669	pus1	99	69.431	Poecilia_formosa
ENSAMXG00000008710	pus1	97	69.194	ENSPLAG00000007185	pus1	99	69.194	Poecilia_latipinna
ENSAMXG00000008710	pus1	97	69.194	ENSPLAG00000002692	-	99	69.194	Poecilia_latipinna
ENSAMXG00000008710	pus1	97	69.431	ENSPMEG00000011115	PUS1	99	69.431	Poecilia_mexicana
ENSAMXG00000008710	pus1	95	70.660	ENSPMEG00000006038	pus1	97	73.522	Poecilia_mexicana
ENSAMXG00000008710	pus1	89	73.454	ENSPREG00000007231	pus1	99	77.933	Poecilia_reticulata
ENSAMXG00000008710	pus1	80	71.221	ENSPPYG00000005132	PUS1	81	71.221	Pongo_abelii
ENSAMXG00000008710	pus1	59	69.804	ENSPCAG00000009110	-	62	69.804	Procavia_capensis
ENSAMXG00000008710	pus1	79	63.636	ENSPCOG00000015595	PUS1	84	62.791	Propithecus_coquereli
ENSAMXG00000008710	pus1	89	73.165	ENSPNYG00000013571	pus1	93	73.165	Pundamilia_nyererei
ENSAMXG00000008710	pus1	100	84.954	ENSPNAG00000003938	pus1	100	84.954	Pygocentrus_nattereri
ENSAMXG00000008710	pus1	81	71.470	ENSRNOG00000037500	Pus1	82	71.470	Rattus_norvegicus
ENSAMXG00000008710	pus1	80	71.221	ENSRBIG00000043177	PUS1	86	71.221	Rhinopithecus_bieti
ENSAMXG00000008710	pus1	88	63.659	ENSRROG00000039744	PUS1	93	63.659	Rhinopithecus_roxellana
ENSAMXG00000008710	pus1	79	44.521	YPL212C	-	62	44.521	Saccharomyces_cerevisiae
ENSAMXG00000008710	pus1	53	46.218	YGL063W	-	60	46.218	Saccharomyces_cerevisiae
ENSAMXG00000008710	pus1	80	71.221	ENSSBOG00000023593	PUS1	86	72.333	Saimiri_boliviensis_boliviensis
ENSAMXG00000008710	pus1	84	67.778	ENSSHAG00000013193	PUS1	86	68.451	Sarcophilus_harrisii
ENSAMXG00000008710	pus1	84	74.659	ENSSFOG00015003463	pus1	87	73.560	Scleropages_formosus
ENSAMXG00000008710	pus1	89	72.063	ENSSMAG00000019075	pus1	91	72.727	Scophthalmus_maximus
ENSAMXG00000008710	pus1	97	68.150	ENSSDUG00000007102	pus1	99	68.150	Seriola_dumerili
ENSAMXG00000008710	pus1	97	67.681	ENSSLDG00000022850	pus1	99	67.681	Seriola_lalandi_dorsalis
ENSAMXG00000008710	pus1	71	62.951	ENSSARG00000008367	PUS1	99	62.951	Sorex_araneus
ENSAMXG00000008710	pus1	84	71.350	ENSSPUG00000010009	PUS1	90	71.350	Sphenodon_punctatus
ENSAMXG00000008710	pus1	89	72.475	ENSSPAG00000006272	pus1	100	72.475	Stegastes_partitus
ENSAMXG00000008710	pus1	80	70.640	ENSSSCG00000009741	PUS1	86	70.640	Sus_scrofa
ENSAMXG00000008710	pus1	75	76.543	ENSTGUG00000008068	PUS1	98	76.543	Taeniopygia_guttata
ENSAMXG00000008710	pus1	87	72.606	ENSTRUG00000002198	pus1	93	72.606	Takifugu_rubripes
ENSAMXG00000008710	pus1	85	72.011	ENSTNIG00000003942	pus1	93	72.011	Tetraodon_nigroviridis
ENSAMXG00000008710	pus1	80	69.186	ENSTTRG00000000632	PUS1	81	69.186	Tursiops_truncatus
ENSAMXG00000008710	pus1	81	69.741	ENSUAMG00000017197	PUS1	88	69.741	Ursus_americanus
ENSAMXG00000008710	pus1	81	70.029	ENSUMAG00000002831	PUS1	95	72.468	Ursus_maritimus
ENSAMXG00000008710	pus1	80	69.186	ENSVVUG00000004199	PUS1	79	69.186	Vulpes_vulpes
ENSAMXG00000008710	pus1	82	71.186	ENSXETG00000002030	pus1	88	71.186	Xenopus_tropicalis
ENSAMXG00000008710	pus1	74	48.287	ENSXETG00000033640	-	100	48.287	Xenopus_tropicalis
ENSAMXG00000008710	pus1	89	74.227	ENSXCOG00000004722	pus1	99	75.591	Xiphophorus_couchianus
ENSAMXG00000008710	pus1	92	72.070	ENSXMAG00000000988	pus1	96	72.070	Xiphophorus_maculatus