EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000008921 (Gene tree)
Gene ID: -
Gene Symbol: chd5
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 5
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 47290 bases
Position: chr22:8380340-8427629
Accession: 103046266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009172	ResIII	PF04851.15	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009172	-	5064	XM_015601976	ENSAMXP00000009172	1687 (aa)	XP_015457462	W5KNL0

Gene Model

Click here to download ENSAMXG00000008921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000008921	chd5	97	70.743	ENSAMXG00000019969	chd4a	92	70.595
ENSAMXG00000008921	chd5	97	69.982	ENSAMXG00000010614	-	94	69.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008921	chd5	95	86.957	ENSG00000116254	CHD5	89	84.188	Homo_sapiens
ENSAMXG00000008921	chd5	95	86.047	ENSAMEG00000009880	CHD5	88	79.688	Ailuropoda_melanoleuca
ENSAMXG00000008921	chd5	96	89.583	ENSACIG00000012582	chd5	89	89.583	Amphilophus_citrinellus
ENSAMXG00000008921	chd5	97	88.343	ENSAOCG00000020356	chd5	83	87.821	Amphiprion_ocellaris
ENSAMXG00000008921	chd5	94	82.869	ENSAPLG00000015475	CHD5	85	84.553	Anas_platyrhynchos
ENSAMXG00000008921	chd5	99	75.167	ENSACAG00000002441	CHD5	91	75.042	Anolis_carolinensis
ENSAMXG00000008921	chd5	89	92.949	ENSANAG00000001078	CHD5	86	80.488	Aotus_nancymaae
ENSAMXG00000008921	chd5	99	80.856	ENSACLG00000003012	chd5	94	80.451	Astatotilapia_calliptera
ENSAMXG00000008921	chd5	92	90.698	ENSBTAG00000040477	CHD5	90	84.146	Bos_taurus
ENSAMXG00000008921	chd5	95	86.957	ENSCJAG00000000101	CHD5	86	81.911	Callithrix_jacchus
ENSAMXG00000008921	chd5	98	79.873	ENSCAFG00000019545	CHD5	93	80.313	Canis_familiaris
ENSAMXG00000008921	chd5	98	82.016	ENSCAFG00020008689	CHD5	84	82.482	Canis_lupus_dingo
ENSAMXG00000008921	chd5	92	90.698	ENSCHIG00000015027	CHD5	84	85.366	Capra_hircus
ENSAMXG00000008921	chd5	95	86.220	ENSTSYG00000033991	CHD5	87	78.353	Carlito_syrichta
ENSAMXG00000008921	chd5	98	82.327	ENSCAPG00000009294	CHD5	88	82.336	Cavia_aperea
ENSAMXG00000008921	chd5	98	82.327	ENSCPOG00000025080	CHD5	88	82.336	Cavia_porcellus
ENSAMXG00000008921	chd5	94	86.957	ENSCCAG00000024756	CHD5	86	80.405	Cebus_capucinus
ENSAMXG00000008921	chd5	94	86.957	ENSCATG00000043011	CHD5	87	80.415	Cercocebus_atys
ENSAMXG00000008921	chd5	99	77.803	ENSCLAG00000010589	CHD5	92	78.555	Chinchilla_lanigera
ENSAMXG00000008921	chd5	94	86.957	ENSCSAG00000000733	CHD5	86	80.415	Chlorocebus_sabaeus
ENSAMXG00000008921	chd5	99	78.548	ENSCPBG00000019363	CHD5	96	79.208	Chrysemys_picta_bellii
ENSAMXG00000008921	chd5	95	87.649	ENSCANG00000032302	CHD5	87	80.171	Colobus_angolensis_palliatus
ENSAMXG00000008921	chd5	56	81.237	ENSCGRG00001011042	Chd5	91	80.933	Cricetulus_griseus_chok1gshd
ENSAMXG00000008921	chd5	97	82.255	ENSCGRG00000011341	Chd5	85	84.553	Cricetulus_griseus_crigri
ENSAMXG00000008921	chd5	95	73.585	ENSDARG00000025789	chd4b	85	73.585	Danio_rerio
ENSAMXG00000008921	chd5	98	89.377	ENSDARG00000105083	chd5	90	92.493	Danio_rerio
ENSAMXG00000008921	chd5	92	89.326	ENSDNOG00000046342	CHD5	82	89.326	Dasypus_novemcinctus
ENSAMXG00000008921	chd5	98	82.104	ENSDORG00000005923	Chd5	88	82.117	Dipodomys_ordii
ENSAMXG00000008921	chd5	99	77.076	ENSEASG00005021464	CHD5	93	78.297	Equus_asinus_asinus
ENSAMXG00000008921	chd5	95	86.047	ENSECAG00000025043	CHD5	93	84.553	Equus_caballus
ENSAMXG00000008921	chd5	71	85.714	ENSEEUG00000002772	CHD5	62	84.793	Erinaceus_europaeus
ENSAMXG00000008921	chd5	97	85.800	ENSELUG00000010742	chd5	92	85.637	Esox_lucius
ENSAMXG00000008921	chd5	95	85.992	ENSFCAG00000006319	CHD5	87	80.455	Felis_catus
ENSAMXG00000008921	chd5	97	79.743	ENSFALG00000009740	CHD5	87	79.672	Ficedula_albicollis
ENSAMXG00000008921	chd5	99	76.418	ENSFDAG00000012881	CHD5	90	76.275	Fukomys_damarensis
ENSAMXG00000008921	chd5	97	80.029	ENSGALG00000000747	CHD5	92	76.143	Gallus_gallus
ENSAMXG00000008921	chd5	61	86.994	ENSGACG00000004389	chd5	89	86.789	Gasterosteus_aculeatus
ENSAMXG00000008921	chd5	97	91.163	ENSGAGG00000001590	CHD5	94	90.000	Gopherus_agassizii
ENSAMXG00000008921	chd5	95	86.957	ENSGGOG00000000708	CHD5	87	81.570	Gorilla_gorilla
ENSAMXG00000008921	chd5	99	81.121	ENSHBUG00000013453	chd5	94	80.617	Haplochromis_burtoni
ENSAMXG00000008921	chd5	97	81.838	ENSHGLG00000018184	CHD5	89	80.057	Heterocephalus_glaber_female
ENSAMXG00000008921	chd5	95	81.538	ENSHGLG00100013261	CHD5	85	77.815	Heterocephalus_glaber_male
ENSAMXG00000008921	chd5	97	91.170	ENSIPUG00000005446	chd5	95	87.312	Ictalurus_punctatus
ENSAMXG00000008921	chd5	98	82.456	ENSSTOG00000002778	CHD5	88	82.336	Ictidomys_tridecemlineatus
ENSAMXG00000008921	chd5	98	82.169	ENSJJAG00000019072	Chd5	91	77.582	Jaculus_jaculus
ENSAMXG00000008921	chd5	97	88.196	ENSLOCG00000004944	chd5	91	81.579	Lepisosteus_oculatus
ENSAMXG00000008921	chd5	95	85.992	ENSLAFG00000006348	CHD5	98	76.107	Loxodonta_africana
ENSAMXG00000008921	chd5	92	90.995	ENSMFAG00000033993	CHD5	93	80.415	Macaca_fascicularis
ENSAMXG00000008921	chd5	92	90.995	ENSMMUG00000016838	CHD5	86	82.526	Macaca_mulatta
ENSAMXG00000008921	chd5	94	87.251	ENSMNEG00000040044	CHD5	86	80.415	Macaca_nemestrina
ENSAMXG00000008921	chd5	94	79.006	ENSMLEG00000039166	CHD5	88	79.284	Mandrillus_leucophaeus
ENSAMXG00000008921	chd5	99	79.989	ENSMZEG00005000841	chd5	94	79.587	Maylandia_zebra
ENSAMXG00000008921	chd5	97	80.029	ENSMGAG00000001055	CHD5	87	80.200	Meleagris_gallopavo
ENSAMXG00000008921	chd5	99	78.559	ENSMICG00000017862	CHD5	91	78.473	Microcebus_murinus
ENSAMXG00000008921	chd5	97	82.685	ENSMOCG00000011049	Chd5	84	85.772	Microtus_ochrogaster
ENSAMXG00000008921	chd5	81	80.205	ENSMODG00000006294	CHD5	64	80.546	Monodelphis_domestica
ENSAMXG00000008921	chd5	99	88.276	ENSMALG00000002831	chd5	91	87.586	Monopterus_albus
ENSAMXG00000008921	chd5	94	85.200	MGP_CAROLIEiJ_G0026857	Chd5	84	85.714	Mus_caroli
ENSAMXG00000008921	chd5	94	85.200	ENSMUSG00000005045	Chd5	84	85.714	Mus_musculus
ENSAMXG00000008921	chd5	94	85.200	MGP_PahariEiJ_G0029205	Chd5	84	85.714	Mus_pahari
ENSAMXG00000008921	chd5	94	85.200	MGP_SPRETEiJ_G0027850	Chd5	84	85.714	Mus_spretus
ENSAMXG00000008921	chd5	97	80.241	ENSMPUG00000007122	CHD5	85	80.613	Mustela_putorius_furo
ENSAMXG00000008921	chd5	97	80.387	ENSNGAG00000019812	Chd5	84	80.645	Nannospalax_galili
ENSAMXG00000008921	chd5	97	80.100	ENSNLEG00000010320	CHD5	87	80.071	Nomascus_leucogenys
ENSAMXG00000008921	chd5	82	80.723	ENSOPRG00000004304	CHD5	74	80.723	Ochotona_princeps
ENSAMXG00000008921	chd5	99	77.456	ENSODEG00000010262	CHD5	92	77.873	Octodon_degus
ENSAMXG00000008921	chd5	97	90.972	ENSONIG00000000619	chd5	85	90.972	Oreochromis_niloticus
ENSAMXG00000008921	chd5	95	85.878	ENSOANG00000001819	CHD5	87	80.690	Ornithorhynchus_anatinus
ENSAMXG00000008921	chd5	98	80.057	ENSOGAG00000005703	CHD5	91	75.361	Otolemur_garnettii
ENSAMXG00000008921	chd5	92	90.698	ENSOARG00000013425	CHD5	90	74.772	Ovis_aries
ENSAMXG00000008921	chd5	95	86.957	ENSPPAG00000034048	CHD5	87	81.570	Pan_paniscus
ENSAMXG00000008921	chd5	95	85.992	ENSPPRG00000009453	CHD5	87	79.886	Panthera_pardus
ENSAMXG00000008921	chd5	99	70.694	ENSPTIG00000013926	CHD5	92	71.444	Panthera_tigris_altaica
ENSAMXG00000008921	chd5	95	86.957	ENSPTRG00000000075	CHD5	86	81.570	Pan_troglodytes
ENSAMXG00000008921	chd5	94	87.251	ENSPANG00000006765	CHD5	86	80.415	Papio_anubis
ENSAMXG00000008921	chd5	97	87.060	ENSPKIG00000004282	chd5	92	86.399	Paramormyrops_kingsleyae
ENSAMXG00000008921	chd5	97	79.237	ENSPSIG00000006414	CHD5	90	79.376	Pelodiscus_sinensis
ENSAMXG00000008921	chd5	67	81.998	ENSPEMG00000014799	Chd5	89	81.763	Peromyscus_maniculatus_bairdii
ENSAMXG00000008921	chd5	97	82.628	ENSPCIG00000028310	CHD5	90	75.568	Phascolarctos_cinereus
ENSAMXG00000008921	chd5	99	87.353	ENSPLAG00000005343	chd5	94	75.701	Poecilia_latipinna
ENSAMXG00000008921	chd5	99	78.588	ENSPPYG00000001952	CHD5	92	78.588	Pongo_abelii
ENSAMXG00000008921	chd5	98	80.198	ENSPCOG00000022930	CHD5	87	80.242	Propithecus_coquereli
ENSAMXG00000008921	chd5	96	89.273	ENSPNYG00000003183	chd5	90	85.714	Pundamilia_nyererei
ENSAMXG00000008921	chd5	97	82.192	ENSRNOG00000011268	Chd5	87	81.507	Rattus_norvegicus
ENSAMXG00000008921	chd5	95	87.649	ENSRBIG00000032140	CHD5	89	79.957	Rhinopithecus_bieti
ENSAMXG00000008921	chd5	99	87.649	ENSRROG00000041146	CHD5	87	79.886	Rhinopithecus_roxellana
ENSAMXG00000008921	chd5	88	86.957	ENSSBOG00000001955	CHD5	93	82.582	Saimiri_boliviensis_boliviensis
ENSAMXG00000008921	chd5	99	71.002	ENSSHAG00000018641	CHD5	95	70.520	Sarcophilus_harrisii
ENSAMXG00000008921	chd5	97	89.809	ENSSFOG00015006296	chd5	91	85.764	Scleropages_formosus
ENSAMXG00000008921	chd5	97	85.860	ENSSDUG00000017526	chd5	94	85.335	Seriola_dumerili
ENSAMXG00000008921	chd5	98	79.461	ENSSPUG00000010622	CHD5	91	72.241	Sphenodon_punctatus
ENSAMXG00000008921	chd5	95	85.057	ENSSSCG00000003366	CHD5	93	80.514	Sus_scrofa
ENSAMXG00000008921	chd5	93	85.106	ENSTGUG00000002634	-	91	77.471	Taeniopygia_guttata
ENSAMXG00000008921	chd5	57	84.671	ENSTNIG00000004346	chd5	96	84.449	Tetraodon_nigroviridis
ENSAMXG00000008921	chd5	98	81.060	ENSTTRG00000010468	CHD5	87	81.377	Tursiops_truncatus
ENSAMXG00000008921	chd5	93	90.367	ENSUAMG00000024509	CHD5	92	79.476	Ursus_americanus
ENSAMXG00000008921	chd5	91	92.708	ENSUMAG00000024173	CHD5	87	78.013	Ursus_maritimus
ENSAMXG00000008921	chd5	89	91.333	ENSVVUG00000026480	CHD5	87	91.333	Vulpes_vulpes
ENSAMXG00000008921	chd5	99	74.532	ENSXETG00000002904	chd5	95	74.194	Xenopus_tropicalis
ENSAMXG00000008921	chd5	62	87.500	ENSXCOG00000014202	chd5	91	86.804	Xiphophorus_couchianus