EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000008943 (Gene tree)
Gene ID: 103029667
Gene Symbol: cnot6l
Alias: zgc:111987
Full Name: CCR4-NOT transcription complex subunit 6 like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 17505 bases
Position: chrAPWO02000029.1:1747561-1765065
Accession: 103029667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009193	Exo_endo_phos	PF03372.23	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009193	-	1702	XM_007238699	ENSAMXP00000009193	563 (aa)	XP_007238761	W5KNN1

Gene Model

Click here to download ENSAMXG00000008943's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000008943	cnot6l	98	73.968	ENSAMXG00000019140	cnot6a	100	73.968
ENSAMXG00000008943	cnot6l	98	72.401	ENSAMXG00000034694	cnot6b	100	72.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008943	cnot6l	98	82.790	ENSG00000138767	CNOT6L	100	89.241	Homo_sapiens
ENSAMXG00000008943	cnot6l	98	89.512	ENSAPOG00000005894	cnot6l	100	90.235	Acanthochromis_polyacanthus
ENSAMXG00000008943	cnot6l	98	82.609	ENSAMEG00000005570	CNOT6L	99	83.333	Ailuropoda_melanoleuca
ENSAMXG00000008943	cnot6l	98	88.969	ENSACIG00000002515	cnot6l	100	89.693	Amphilophus_citrinellus
ENSAMXG00000008943	cnot6l	98	85.895	ENSAOCG00000006705	cnot6l	100	86.618	Amphiprion_ocellaris
ENSAMXG00000008943	cnot6l	98	86.076	ENSAPEG00000020035	cnot6l	100	86.799	Amphiprion_percula
ENSAMXG00000008943	cnot6l	98	90.054	ENSATEG00000008774	cnot6l	100	90.235	Anabas_testudineus
ENSAMXG00000008943	cnot6l	98	81.867	ENSAPLG00000003448	CNOT6L	100	82.585	Anas_platyrhynchos
ENSAMXG00000008943	cnot6l	97	83.029	ENSACAG00000012099	CNOT6L	99	83.029	Anolis_carolinensis
ENSAMXG00000008943	cnot6l	98	82.790	ENSANAG00000023917	CNOT6L	99	83.514	Aotus_nancymaae
ENSAMXG00000008943	cnot6l	98	88.246	ENSACLG00000000879	cnot6l	100	88.969	Astatotilapia_calliptera
ENSAMXG00000008943	cnot6l	98	82.790	ENSBTAG00000049571	CNOT6L	99	83.514	Bos_taurus
ENSAMXG00000008943	cnot6l	98	82.790	ENSCJAG00000014846	CNOT6L	99	83.514	Callithrix_jacchus
ENSAMXG00000008943	cnot6l	98	82.790	ENSCAFG00000008699	CNOT6L	99	83.514	Canis_familiaris
ENSAMXG00000008943	cnot6l	98	82.909	ENSCAFG00020011108	CNOT6L	100	83.636	Canis_lupus_dingo
ENSAMXG00000008943	cnot6l	98	82.790	ENSCHIG00000006297	CNOT6L	99	83.514	Capra_hircus
ENSAMXG00000008943	cnot6l	98	82.790	ENSTSYG00000009068	CNOT6L	100	83.514	Carlito_syrichta
ENSAMXG00000008943	cnot6l	84	92.105	ENSCPOG00000010337	CNOT6L	99	92.105	Cavia_porcellus
ENSAMXG00000008943	cnot6l	98	82.790	ENSCCAG00000025000	CNOT6L	99	83.514	Cebus_capucinus
ENSAMXG00000008943	cnot6l	98	82.790	ENSCATG00000029623	CNOT6L	99	83.514	Cercocebus_atys
ENSAMXG00000008943	cnot6l	98	83.333	ENSCLAG00000004598	CNOT6L	99	83.333	Chinchilla_lanigera
ENSAMXG00000008943	cnot6l	98	82.790	ENSCSAG00000004580	CNOT6L	99	83.514	Chlorocebus_sabaeus
ENSAMXG00000008943	cnot6l	72	71.429	ENSCHOG00000001108	-	69	77.143	Choloepus_hoffmanni
ENSAMXG00000008943	cnot6l	98	82.065	ENSCPBG00000019403	CNOT6L	100	82.790	Chrysemys_picta_bellii
ENSAMXG00000008943	cnot6l	98	82.790	ENSCANG00000028583	CNOT6L	99	83.514	Colobus_angolensis_palliatus
ENSAMXG00000008943	cnot6l	98	81.522	ENSCGRG00001022099	Cnot6l	100	82.246	Cricetulus_griseus_chok1gshd
ENSAMXG00000008943	cnot6l	98	80.797	ENSCGRG00000000543	Cnot6l	100	81.522	Cricetulus_griseus_crigri
ENSAMXG00000008943	cnot6l	98	87.161	ENSCSEG00000014001	cnot6l	100	87.161	Cynoglossus_semilaevis
ENSAMXG00000008943	cnot6l	74	86.331	ENSCSEG00000010395	-	98	86.331	Cynoglossus_semilaevis
ENSAMXG00000008943	cnot6l	95	91.061	ENSCVAG00000021683	cnot6l	96	91.061	Cyprinodon_variegatus
ENSAMXG00000008943	cnot6l	98	92.559	ENSDARG00000054597	cnot6l	99	92.559	Danio_rerio
ENSAMXG00000008943	cnot6l	98	74.640	ENSDNOG00000004229	CNOT6L	99	78.328	Dasypus_novemcinctus
ENSAMXG00000008943	cnot6l	98	75.181	ENSDORG00000011458	Cnot6l	100	75.181	Dipodomys_ordii
ENSAMXG00000008943	cnot6l	98	71.581	ENSEBUG00000004849	cnot6l	100	71.581	Eptatretus_burgeri
ENSAMXG00000008943	cnot6l	85	84.440	ENSEASG00005016429	CNOT6L	91	84.440	Equus_asinus_asinus
ENSAMXG00000008943	cnot6l	91	81.818	ENSECAG00000001582	CNOT6L	87	84.440	Equus_caballus
ENSAMXG00000008943	cnot6l	98	88.628	ENSELUG00000013353	cnot6l	88	88.628	Esox_lucius
ENSAMXG00000008943	cnot6l	98	82.790	ENSFCAG00000008322	CNOT6L	99	83.514	Felis_catus
ENSAMXG00000008943	cnot6l	98	82.940	ENSFALG00000008515	CNOT6L	99	83.666	Ficedula_albicollis
ENSAMXG00000008943	cnot6l	98	83.514	ENSFDAG00000007719	CNOT6L	95	83.514	Fukomys_damarensis
ENSAMXG00000008943	cnot6l	98	80.541	ENSFHEG00000012364	cnot6l	100	80.721	Fundulus_heteroclitus
ENSAMXG00000008943	cnot6l	90	66.601	ENSGMOG00000011077	-	99	66.403	Gadus_morhua
ENSAMXG00000008943	cnot6l	85	78.750	ENSGMOG00000000730	cnot6l	99	78.750	Gadus_morhua
ENSAMXG00000008943	cnot6l	98	82.577	ENSGALG00000010333	CNOT6L	90	83.303	Gallus_gallus
ENSAMXG00000008943	cnot6l	94	89.850	ENSGAFG00000006105	cnot6l	98	89.850	Gambusia_affinis
ENSAMXG00000008943	cnot6l	87	82.653	ENSGAGG00000008605	CNOT6L	94	82.653	Gopherus_agassizii
ENSAMXG00000008943	cnot6l	98	82.790	ENSGGOG00000023412	CNOT6L	98	83.514	Gorilla_gorilla
ENSAMXG00000008943	cnot6l	98	88.108	ENSHBUG00000004755	cnot6l	95	90.625	Haplochromis_burtoni
ENSAMXG00000008943	cnot6l	98	83.514	ENSHGLG00000006452	CNOT6L	100	83.514	Heterocephalus_glaber_female
ENSAMXG00000008943	cnot6l	98	83.514	ENSHGLG00100012384	CNOT6L	98	83.514	Heterocephalus_glaber_male
ENSAMXG00000008943	cnot6l	98	76.708	ENSHCOG00000009512	cnot6l	100	76.883	Hippocampus_comes
ENSAMXG00000008943	cnot6l	98	94.171	ENSIPUG00000009879	cnot6l	100	94.171	Ictalurus_punctatus
ENSAMXG00000008943	cnot6l	98	82.790	ENSSTOG00000015293	CNOT6L	100	83.514	Ictidomys_tridecemlineatus
ENSAMXG00000008943	cnot6l	98	82.246	ENSJJAG00000020583	Cnot6l	99	82.971	Jaculus_jaculus
ENSAMXG00000008943	cnot6l	98	87.342	ENSKMAG00000004165	cnot6l	100	87.523	Kryptolebias_marmoratus
ENSAMXG00000008943	cnot6l	98	88.203	ENSLBEG00000027202	cnot6l	100	88.203	Labrus_bergylta
ENSAMXG00000008943	cnot6l	98	83.848	ENSLACG00000004684	CNOT6L	100	83.666	Latimeria_chalumnae
ENSAMXG00000008943	cnot6l	98	85.246	ENSLOCG00000007420	cnot6l	92	85.064	Lepisosteus_oculatus
ENSAMXG00000008943	cnot6l	98	82.790	ENSLAFG00000011449	CNOT6L	100	81.915	Loxodonta_africana
ENSAMXG00000008943	cnot6l	98	82.790	ENSMFAG00000044296	CNOT6L	99	83.514	Macaca_fascicularis
ENSAMXG00000008943	cnot6l	98	82.790	ENSMMUG00000045609	CNOT6L	98	83.514	Macaca_mulatta
ENSAMXG00000008943	cnot6l	98	82.790	ENSMNEG00000041259	CNOT6L	100	83.514	Macaca_nemestrina
ENSAMXG00000008943	cnot6l	98	82.790	ENSMLEG00000029198	CNOT6L	98	83.514	Mandrillus_leucophaeus
ENSAMXG00000008943	cnot6l	97	89.493	ENSMAMG00000016954	cnot6l	98	90.217	Mastacembelus_armatus
ENSAMXG00000008943	cnot6l	98	88.246	ENSMZEG00005020235	cnot6l	100	88.969	Maylandia_zebra
ENSAMXG00000008943	cnot6l	98	82.577	ENSMGAG00000005144	CNOT6L	99	83.303	Meleagris_gallopavo
ENSAMXG00000008943	cnot6l	98	82.428	ENSMICG00000017026	CNOT6L	99	83.152	Microcebus_murinus
ENSAMXG00000008943	cnot6l	98	81.522	ENSMOCG00000009451	Cnot6l	99	82.246	Microtus_ochrogaster
ENSAMXG00000008943	cnot6l	98	89.512	ENSMMOG00000014621	cnot6l	100	89.512	Mola_mola
ENSAMXG00000008943	cnot6l	98	81.703	ENSMODG00000011744	CNOT6L	75	82.428	Monodelphis_domestica
ENSAMXG00000008943	cnot6l	98	89.350	ENSMALG00000006354	cnot6l	100	90.072	Monopterus_albus
ENSAMXG00000008943	cnot6l	98	81.522	MGP_CAROLIEiJ_G0027429	Cnot6l	99	83.486	Mus_caroli
ENSAMXG00000008943	cnot6l	98	81.522	ENSMUSG00000034724	Cnot6l	99	83.486	Mus_musculus
ENSAMXG00000008943	cnot6l	98	81.522	MGP_PahariEiJ_G0017207	Cnot6l	100	82.246	Mus_pahari
ENSAMXG00000008943	cnot6l	98	81.522	MGP_SPRETEiJ_G0028426	Cnot6l	100	82.246	Mus_spretus
ENSAMXG00000008943	cnot6l	93	78.137	ENSMPUG00000003895	CNOT6L	100	78.897	Mustela_putorius_furo
ENSAMXG00000008943	cnot6l	91	81.977	ENSMLUG00000000936	CNOT6L	100	82.752	Myotis_lucifugus
ENSAMXG00000008943	cnot6l	98	81.341	ENSNGAG00000019803	Cnot6l	100	82.065	Nannospalax_galili
ENSAMXG00000008943	cnot6l	88	86.028	ENSNBRG00000016345	cnot6l	81	87.425	Neolamprologus_brichardi
ENSAMXG00000008943	cnot6l	98	82.790	ENSNLEG00000028820	CNOT6L	99	83.514	Nomascus_leucogenys
ENSAMXG00000008943	cnot6l	78	69.300	ENSMEUG00000009767	-	79	70.575	Notamacropus_eugenii
ENSAMXG00000008943	cnot6l	98	83.514	ENSODEG00000004161	CNOT6L	99	83.514	Octodon_degus
ENSAMXG00000008943	cnot6l	98	87.993	ENSONIG00000013992	cnot6l	97	88.710	Oreochromis_niloticus
ENSAMXG00000008943	cnot6l	98	82.609	ENSOANG00000003561	CNOT6L	100	83.152	Ornithorhynchus_anatinus
ENSAMXG00000008943	cnot6l	98	82.790	ENSOCUG00000002497	CNOT6L	99	83.514	Oryctolagus_cuniculus
ENSAMXG00000008943	cnot6l	98	86.799	ENSORLG00000018874	cnot6l	100	87.161	Oryzias_latipes
ENSAMXG00000008943	cnot6l	98	86.799	ENSOMEG00000010026	cnot6l	100	86.799	Oryzias_melastigma
ENSAMXG00000008943	cnot6l	98	79.533	ENSOGAG00000012122	CNOT6L	100	80.251	Otolemur_garnettii
ENSAMXG00000008943	cnot6l	98	82.790	ENSOARG00000017771	CNOT6L	99	83.514	Ovis_aries
ENSAMXG00000008943	cnot6l	82	92.105	ENSPPAG00000034242	-	98	92.105	Pan_paniscus
ENSAMXG00000008943	cnot6l	98	80.072	ENSPPAG00000030178	-	100	80.797	Pan_paniscus
ENSAMXG00000008943	cnot6l	98	82.790	ENSPPRG00000008857	CNOT6L	99	83.514	Panthera_pardus
ENSAMXG00000008943	cnot6l	98	82.790	ENSPTIG00000015698	CNOT6L	99	83.514	Panthera_tigris_altaica
ENSAMXG00000008943	cnot6l	82	92.105	ENSPTRG00000045291	-	99	92.105	Pan_troglodytes
ENSAMXG00000008943	cnot6l	98	82.790	ENSPTRG00000016198	CNOT6L	99	83.514	Pan_troglodytes
ENSAMXG00000008943	cnot6l	98	82.790	ENSPANG00000007831	CNOT6L	99	83.514	Papio_anubis
ENSAMXG00000008943	cnot6l	98	88.889	ENSPKIG00000002892	cnot6l	100	88.889	Paramormyrops_kingsleyae
ENSAMXG00000008943	cnot6l	98	82.246	ENSPSIG00000016241	CNOT6L	99	83.333	Pelodiscus_sinensis
ENSAMXG00000008943	cnot6l	97	85.897	ENSPMGG00000004021	cnot6l	99	85.714	Periophthalmus_magnuspinnatus
ENSAMXG00000008943	cnot6l	98	81.522	ENSPEMG00000011554	Cnot6l	100	82.246	Peromyscus_maniculatus_bairdii
ENSAMXG00000008943	cnot6l	93	70.501	ENSPMAG00000005706	cnot6l	97	69.818	Petromyzon_marinus
ENSAMXG00000008943	cnot6l	98	81.159	ENSPCIG00000027504	-	100	81.884	Phascolarctos_cinereus
ENSAMXG00000008943	cnot6l	98	89.150	ENSPFOG00000013163	cnot6l	100	89.150	Poecilia_formosa
ENSAMXG00000008943	cnot6l	98	88.788	ENSPLAG00000019862	cnot6l	100	88.788	Poecilia_latipinna
ENSAMXG00000008943	cnot6l	98	89.331	ENSPMEG00000015834	cnot6l	100	89.331	Poecilia_mexicana
ENSAMXG00000008943	cnot6l	98	88.969	ENSPREG00000003561	cnot6l	100	88.969	Poecilia_reticulata
ENSAMXG00000008943	cnot6l	98	82.790	ENSPPYG00000014869	CNOT6L	100	83.514	Pongo_abelii
ENSAMXG00000008943	cnot6l	98	53.986	ENSPCAG00000016617	CNOT6L	94	54.710	Procavia_capensis
ENSAMXG00000008943	cnot6l	98	82.790	ENSPCOG00000014669	CNOT6L	99	83.514	Propithecus_coquereli
ENSAMXG00000008943	cnot6l	81	89.189	ENSPVAG00000002690	CNOT6L	78	89.189	Pteropus_vampyrus
ENSAMXG00000008943	cnot6l	90	85.519	ENSPNYG00000006717	cnot6l	93	86.301	Pundamilia_nyererei
ENSAMXG00000008943	cnot6l	98	96.903	ENSPNAG00000003537	cnot6l	98	96.903	Pygocentrus_nattereri
ENSAMXG00000008943	cnot6l	98	81.522	ENSRNOG00000002075	Cnot6l	100	82.246	Rattus_norvegicus
ENSAMXG00000008943	cnot6l	98	82.428	ENSRBIG00000027644	CNOT6L	99	83.152	Rhinopithecus_bieti
ENSAMXG00000008943	cnot6l	98	82.609	ENSRROG00000031003	CNOT6L	100	83.333	Rhinopithecus_roxellana
ENSAMXG00000008943	cnot6l	98	82.790	ENSSBOG00000028521	CNOT6L	100	83.514	Saimiri_boliviensis_boliviensis
ENSAMXG00000008943	cnot6l	98	81.703	ENSSHAG00000006072	CNOT6L	99	82.428	Sarcophilus_harrisii
ENSAMXG00000008943	cnot6l	98	88.160	ENSSFOG00015019044	cnot6l	100	88.160	Scleropages_formosus
ENSAMXG00000008943	cnot6l	98	87.523	ENSSMAG00000015568	cnot6l	100	87.523	Scophthalmus_maximus
ENSAMXG00000008943	cnot6l	98	89.873	ENSSDUG00000018426	cnot6l	100	89.873	Seriola_dumerili
ENSAMXG00000008943	cnot6l	98	89.693	ENSSLDG00000000335	cnot6l	100	89.693	Seriola_lalandi_dorsalis
ENSAMXG00000008943	cnot6l	98	82.609	ENSSPUG00000002016	CNOT6L	100	82.609	Sphenodon_punctatus
ENSAMXG00000008943	cnot6l	98	89.693	ENSSPAG00000022932	cnot6l	100	90.416	Stegastes_partitus
ENSAMXG00000008943	cnot6l	98	82.790	ENSSSCG00000008989	CNOT6L	100	83.514	Sus_scrofa
ENSAMXG00000008943	cnot6l	98	82.577	ENSTGUG00000001737	-	99	83.303	Taeniopygia_guttata
ENSAMXG00000008943	cnot6l	98	88.427	ENSTRUG00000004332	cnot6l	100	88.427	Takifugu_rubripes
ENSAMXG00000008943	cnot6l	98	87.342	ENSTNIG00000016717	cnot6l	100	87.342	Tetraodon_nigroviridis
ENSAMXG00000008943	cnot6l	85	79.046	ENSTBEG00000016519	CNOT6L	96	79.046	Tupaia_belangeri
ENSAMXG00000008943	cnot6l	85	84.025	ENSTTRG00000005606	CNOT6L	99	84.025	Tursiops_truncatus
ENSAMXG00000008943	cnot6l	98	82.609	ENSUAMG00000026982	CNOT6L	100	83.333	Ursus_americanus
ENSAMXG00000008943	cnot6l	98	82.609	ENSUMAG00000007955	CNOT6L	99	83.333	Ursus_maritimus
ENSAMXG00000008943	cnot6l	98	78.986	ENSVPAG00000010892	CNOT6L	99	79.710	Vicugna_pacos
ENSAMXG00000008943	cnot6l	98	87.870	ENSVVUG00000024858	CNOT6L	100	87.870	Vulpes_vulpes
ENSAMXG00000008943	cnot6l	98	81.703	ENSXETG00000000372	cnot6l	99	81.522	Xenopus_tropicalis
ENSAMXG00000008943	cnot6l	98	88.788	ENSXMAG00000002900	cnot6l	100	88.788	Xiphophorus_maculatus