EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000008954 (Gene tree)
Gene ID: 103029206
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2596 bases
Position: chr16:17075926-17078521
Accession: 103029206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009203	RNA_pol_Rpb4	PF03874.16	7.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009203	-	953	XM_022678124	ENSAMXP00000009203	143 (aa)	XP_022533845	W5KNP1

Gene Model

Click here to download ENSAMXG00000008954's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000008954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000008954	polr2d	100	90.210	ENSG00000144231	POLR2D	100	97.115	Homo_sapiens
ENSAMXG00000008954	polr2d	100	93.056	ENSAPOG00000023553	polr2d	92	97.744	Acanthochromis_polyacanthus
ENSAMXG00000008954	polr2d	100	88.966	ENSAMEG00000011746	POLR2D	94	93.333	Ailuropoda_melanoleuca
ENSAMXG00000008954	polr2d	100	93.056	ENSAOCG00000007295	polr2d	92	97.744	Amphiprion_ocellaris
ENSAMXG00000008954	polr2d	100	93.056	ENSAPEG00000018714	polr2d	92	97.744	Amphiprion_percula
ENSAMXG00000008954	polr2d	99	92.254	ENSATEG00000020416	polr2d	92	96.992	Anabas_testudineus
ENSAMXG00000008954	polr2d	100	90.909	ENSACAG00000005255	POLR2D	92	96.183	Anolis_carolinensis
ENSAMXG00000008954	polr2d	100	90.210	ENSANAG00000019959	POLR2D	94	94.737	Aotus_nancymaae
ENSAMXG00000008954	polr2d	99	92.958	ENSACLG00000009919	polr2d	90	72.932	Astatotilapia_calliptera
ENSAMXG00000008954	polr2d	100	90.909	ENSBTAG00000053244	POLR2D	93	95.455	Bos_taurus
ENSAMXG00000008954	polr2d	99	58.333	WBGene00018391	rpb-4	92	60.150	Caenorhabditis_elegans
ENSAMXG00000008954	polr2d	100	89.510	ENSCJAG00000021814	-	94	93.985	Callithrix_jacchus
ENSAMXG00000008954	polr2d	100	90.210	ENSCJAG00000042216	-	94	94.737	Callithrix_jacchus
ENSAMXG00000008954	polr2d	100	90.210	ENSCAFG00000004311	POLR2D	94	94.737	Canis_familiaris
ENSAMXG00000008954	polr2d	100	90.210	ENSCAFG00020003617	POLR2D	94	94.737	Canis_lupus_dingo
ENSAMXG00000008954	polr2d	100	90.909	ENSCHIG00000025995	POLR2D	93	95.455	Capra_hircus
ENSAMXG00000008954	polr2d	82	94.872	ENSTSYG00000036021	POLR2D	100	94.872	Carlito_syrichta
ENSAMXG00000008954	polr2d	100	90.210	ENSCPOG00000002571	POLR2D	94	93.985	Cavia_porcellus
ENSAMXG00000008954	polr2d	100	90.210	ENSCCAG00000037709	POLR2D	94	94.737	Cebus_capucinus
ENSAMXG00000008954	polr2d	100	90.909	ENSCATG00000036749	POLR2D	94	94.737	Cercocebus_atys
ENSAMXG00000008954	polr2d	100	89.510	ENSCLAG00000004449	POLR2D	94	93.985	Chinchilla_lanigera
ENSAMXG00000008954	polr2d	100	90.909	ENSCSAG00000016861	POLR2D	94	94.737	Chlorocebus_sabaeus
ENSAMXG00000008954	polr2d	82	95.726	ENSCHOG00000013850	POLR2D	100	95.726	Choloepus_hoffmanni
ENSAMXG00000008954	polr2d	90	86.719	ENSCING00000011474	-	96	86.719	Ciona_intestinalis
ENSAMXG00000008954	polr2d	99	80.556	ENSCSAVG00000008353	-	91	84.848	Ciona_savignyi
ENSAMXG00000008954	polr2d	100	90.210	ENSCANG00000043665	POLR2D	94	94.737	Colobus_angolensis_palliatus
ENSAMXG00000008954	polr2d	100	90.210	ENSCGRG00001013608	Polr2d	94	94.737	Cricetulus_griseus_chok1gshd
ENSAMXG00000008954	polr2d	82	95.726	ENSCGRG00000012624	Polr2d	100	95.726	Cricetulus_griseus_crigri
ENSAMXG00000008954	polr2d	100	93.056	ENSCSEG00000006147	polr2d	92	96.992	Cynoglossus_semilaevis
ENSAMXG00000008954	polr2d	97	93.007	ENSCVAG00000000779	polr2d	92	96.241	Cyprinodon_variegatus
ENSAMXG00000008954	polr2d	98	96.429	ENSDARG00000076509	polr2d	99	96.429	Danio_rerio
ENSAMXG00000008954	polr2d	100	90.909	ENSDNOG00000008527	POLR2D	94	94.737	Dasypus_novemcinctus
ENSAMXG00000008954	polr2d	100	90.210	ENSDORG00000026897	Polr2d	94	94.737	Dipodomys_ordii
ENSAMXG00000008954	polr2d	93	78.195	FBgn0263757	Rpb4	96	78.195	Drosophila_melanogaster
ENSAMXG00000008954	polr2d	100	90.909	ENSEBUG00000007675	polr2d	93	95.455	Eptatretus_burgeri
ENSAMXG00000008954	polr2d	100	90.909	ENSEASG00005007103	POLR2D	93	95.455	Equus_asinus_asinus
ENSAMXG00000008954	polr2d	100	90.210	ENSECAG00000000556	POLR2D	94	94.737	Equus_caballus
ENSAMXG00000008954	polr2d	100	94.406	ENSELUG00000005928	polr2d	100	94.406	Esox_lucius
ENSAMXG00000008954	polr2d	100	90.210	ENSFCAG00000027816	POLR2D	94	94.737	Felis_catus
ENSAMXG00000008954	polr2d	100	90.210	ENSFALG00000003528	POLR2D	94	94.737	Ficedula_albicollis
ENSAMXG00000008954	polr2d	100	88.811	ENSFDAG00000007217	POLR2D	94	93.233	Fukomys_damarensis
ENSAMXG00000008954	polr2d	100	93.706	ENSGMOG00000001823	polr2d	92	97.744	Gadus_morhua
ENSAMXG00000008954	polr2d	100	90.210	ENSGALG00000002057	POLR2D	94	94.737	Gallus_gallus
ENSAMXG00000008954	polr2d	97	93.706	ENSGAFG00000016932	polr2d	66	96.992	Gambusia_affinis
ENSAMXG00000008954	polr2d	99	92.958	ENSGACG00000004639	polr2d	92	96.992	Gasterosteus_aculeatus
ENSAMXG00000008954	polr2d	100	90.909	ENSGAGG00000021308	POLR2D	94	95.489	Gopherus_agassizii
ENSAMXG00000008954	polr2d	100	90.210	ENSGGOG00000004723	POLR2D	94	94.737	Gorilla_gorilla
ENSAMXG00000008954	polr2d	100	89.510	ENSHGLG00000016570	Polr2d	94	93.985	Heterocephalus_glaber_female
ENSAMXG00000008954	polr2d	100	89.510	ENSHGLG00100013785	Polr2d	94	93.985	Heterocephalus_glaber_male
ENSAMXG00000008954	polr2d	97	93.525	ENSHCOG00000006425	polr2d	94	96.241	Hippocampus_comes
ENSAMXG00000008954	polr2d	98	95.714	ENSIPUG00000011192	polr2d	99	95.714	Ictalurus_punctatus
ENSAMXG00000008954	polr2d	100	88.112	ENSSTOG00000023329	POLR2D	94	92.481	Ictidomys_tridecemlineatus
ENSAMXG00000008954	polr2d	98	84.397	ENSJJAG00000000783	-	94	87.218	Jaculus_jaculus
ENSAMXG00000008954	polr2d	100	90.210	ENSJJAG00000015053	-	94	94.737	Jaculus_jaculus
ENSAMXG00000008954	polr2d	82	89.744	ENSJJAG00000005723	-	94	89.744	Jaculus_jaculus
ENSAMXG00000008954	polr2d	85	93.443	ENSKMAG00000010677	polr2d	68	93.443	Kryptolebias_marmoratus
ENSAMXG00000008954	polr2d	100	93.706	ENSLACG00000017253	POLR2D	94	97.744	Latimeria_chalumnae
ENSAMXG00000008954	polr2d	99	94.366	ENSLOCG00000009106	polr2d	92	98.496	Lepisosteus_oculatus
ENSAMXG00000008954	polr2d	100	90.210	ENSLAFG00000001848	POLR2D	94	94.737	Loxodonta_africana
ENSAMXG00000008954	polr2d	100	90.909	ENSMFAG00000031937	POLR2D	94	94.737	Macaca_fascicularis
ENSAMXG00000008954	polr2d	100	90.909	ENSMMUG00000001989	POLR2D	94	94.737	Macaca_mulatta
ENSAMXG00000008954	polr2d	100	90.909	ENSMNEG00000035505	POLR2D	94	94.737	Macaca_nemestrina
ENSAMXG00000008954	polr2d	100	90.909	ENSMLEG00000035827	POLR2D	94	94.737	Mandrillus_leucophaeus
ENSAMXG00000008954	polr2d	100	90.210	ENSMGAG00000001248	POLR2D	94	94.737	Meleagris_gallopavo
ENSAMXG00000008954	polr2d	100	89.510	ENSMAUG00000014518	Polr2d	94	93.985	Mesocricetus_auratus
ENSAMXG00000008954	polr2d	100	89.510	ENSMICG00000009931	POLR2D	94	93.985	Microcebus_murinus
ENSAMXG00000008954	polr2d	100	87.413	ENSMOCG00000019367	Polr2d	94	91.729	Microtus_ochrogaster
ENSAMXG00000008954	polr2d	100	75.524	ENSMODG00000025036	-	94	78.947	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	75.524	ENSMODG00000025034	-	94	78.947	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	75.524	ENSMODG00000025035	-	94	78.947	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	74.825	ENSMODG00000025032	-	94	78.195	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	75.524	ENSMODG00000025033	-	94	78.947	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	76.224	ENSMODG00000025030	-	94	79.699	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	75.524	ENSMODG00000025031	-	94	78.947	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	90.909	ENSMODG00000018653	-	94	95.489	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	75.524	ENSMODG00000025029	-	94	78.947	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	76.224	ENSMODG00000025028	-	94	79.699	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	76.224	ENSMODG00000025027	-	94	79.699	Monodelphis_domestica
ENSAMXG00000008954	polr2d	100	76.224	ENSMODG00000025026	-	94	79.699	Monodelphis_domestica
ENSAMXG00000008954	polr2d	99	92.958	ENSMALG00000018266	polr2d	92	96.992	Monopterus_albus
ENSAMXG00000008954	polr2d	100	90.210	MGP_CAROLIEiJ_G0022066	Polr2d	94	94.737	Mus_caroli
ENSAMXG00000008954	polr2d	100	90.210	ENSMUSG00000024258	Polr2d	94	94.737	Mus_musculus
ENSAMXG00000008954	polr2d	100	90.210	MGP_PahariEiJ_G0018800	Polr2d	94	94.737	Mus_pahari
ENSAMXG00000008954	polr2d	100	90.210	MGP_SPRETEiJ_G0022977	Polr2d	94	94.737	Mus_spretus
ENSAMXG00000008954	polr2d	100	90.210	ENSMPUG00000016685	POLR2D	94	94.737	Mustela_putorius_furo
ENSAMXG00000008954	polr2d	83	95.763	ENSMLUG00000006862	POLR2D	100	95.763	Myotis_lucifugus
ENSAMXG00000008954	polr2d	100	90.210	ENSNGAG00000014862	Polr2d	94	94.737	Nannospalax_galili
ENSAMXG00000008954	polr2d	100	90.210	ENSNLEG00000027191	POLR2D	94	94.737	Nomascus_leucogenys
ENSAMXG00000008954	polr2d	82	94.872	ENSOPRG00000005327	POLR2D	100	94.872	Ochotona_princeps
ENSAMXG00000008954	polr2d	100	89.510	ENSODEG00000005262	POLR2D	94	93.985	Octodon_degus
ENSAMXG00000008954	polr2d	99	93.662	ENSONIG00000017290	polr2d	92	97.744	Oreochromis_niloticus
ENSAMXG00000008954	polr2d	83	96.610	ENSOANG00000013216	POLR2D	100	96.610	Ornithorhynchus_anatinus
ENSAMXG00000008954	polr2d	100	84.028	ENSOCUG00000021449	-	94	88.060	Oryctolagus_cuniculus
ENSAMXG00000008954	polr2d	100	88.112	ENSOCUG00000023403	-	94	93.233	Oryctolagus_cuniculus
ENSAMXG00000008954	polr2d	99	92.958	ENSORLG00000005266	polr2d	92	97.744	Oryzias_latipes
ENSAMXG00000008954	polr2d	99	92.958	ENSORLG00020006647	polr2d	92	97.744	Oryzias_latipes_hni
ENSAMXG00000008954	polr2d	99	92.958	ENSORLG00015003222	polr2d	92	97.744	Oryzias_latipes_hsok
ENSAMXG00000008954	polr2d	99	92.958	ENSOMEG00000018915	polr2d	92	97.744	Oryzias_melastigma
ENSAMXG00000008954	polr2d	100	88.276	ENSOGAG00000017118	POLR2D	94	92.593	Otolemur_garnettii
ENSAMXG00000008954	polr2d	100	90.909	ENSOARG00000015995	POLR2D	93	95.455	Ovis_aries
ENSAMXG00000008954	polr2d	100	90.210	ENSPPRG00000020222	POLR2D	94	94.737	Panthera_pardus
ENSAMXG00000008954	polr2d	100	90.210	ENSPTIG00000018618	POLR2D	94	94.737	Panthera_tigris_altaica
ENSAMXG00000008954	polr2d	100	90.210	ENSPTRG00000012436	POLR2D	94	94.737	Pan_troglodytes
ENSAMXG00000008954	polr2d	100	90.909	ENSPANG00000018602	POLR2D	94	94.737	Papio_anubis
ENSAMXG00000008954	polr2d	99	95.070	ENSPKIG00000012166	polr2d	92	98.496	Paramormyrops_kingsleyae
ENSAMXG00000008954	polr2d	83	96.610	ENSPSIG00000002873	POLR2D	100	96.610	Pelodiscus_sinensis
ENSAMXG00000008954	polr2d	100	90.210	ENSPEMG00000018244	Polr2d	94	94.737	Peromyscus_maniculatus_bairdii
ENSAMXG00000008954	polr2d	100	87.413	ENSPMAG00000005021	polr2d	92	91.667	Petromyzon_marinus
ENSAMXG00000008954	polr2d	97	93.706	ENSPFOG00000008969	polr2d	92	96.992	Poecilia_formosa
ENSAMXG00000008954	polr2d	97	93.706	ENSPLAG00000017210	polr2d	92	96.992	Poecilia_latipinna
ENSAMXG00000008954	polr2d	97	93.706	ENSPMEG00000005160	polr2d	92	96.992	Poecilia_mexicana
ENSAMXG00000008954	polr2d	73	98.077	ENSPREG00000021862	polr2d	100	98.077	Poecilia_reticulata
ENSAMXG00000008954	polr2d	100	90.210	ENSPPYG00000012759	POLR2D	94	94.737	Pongo_abelii
ENSAMXG00000008954	polr2d	97	91.489	ENSPCAG00000001396	POLR2D	94	94.737	Procavia_capensis
ENSAMXG00000008954	polr2d	100	89.510	ENSPCOG00000022076	POLR2D	94	93.985	Propithecus_coquereli
ENSAMXG00000008954	polr2d	97	91.489	ENSPVAG00000004002	POLR2D	94	94.737	Pteropus_vampyrus
ENSAMXG00000008954	polr2d	100	96.503	ENSPNAG00000018246	polr2d	93	99.248	Pygocentrus_nattereri
ENSAMXG00000008954	polr2d	100	90.210	ENSRNOG00000016231	Polr2d	94	94.737	Rattus_norvegicus
ENSAMXG00000008954	polr2d	100	90.210	ENSRBIG00000039326	POLR2D	94	94.737	Rhinopithecus_bieti
ENSAMXG00000008954	polr2d	100	90.210	ENSRROG00000023289	POLR2D	94	94.737	Rhinopithecus_roxellana
ENSAMXG00000008954	polr2d	100	90.909	ENSSHAG00000014817	-	94	95.489	Sarcophilus_harrisii
ENSAMXG00000008954	polr2d	99	97.183	ENSSFOG00015024204	polr2d	99	97.183	Scleropages_formosus
ENSAMXG00000008954	polr2d	99	92.958	ENSSDUG00000006060	polr2d	92	96.992	Seriola_dumerili
ENSAMXG00000008954	polr2d	93	96.992	ENSSLDG00000024485	polr2d	92	96.992	Seriola_lalandi_dorsalis
ENSAMXG00000008954	polr2d	82	94.872	ENSSARG00000009037	POLR2D	100	94.872	Sorex_araneus
ENSAMXG00000008954	polr2d	100	90.210	ENSSPUG00000014915	POLR2D	94	94.737	Sphenodon_punctatus
ENSAMXG00000008954	polr2d	99	93.662	ENSSPAG00000013386	polr2d	92	97.744	Stegastes_partitus
ENSAMXG00000008954	polr2d	100	90.210	ENSSSCG00000039230	POLR2D	94	94.737	Sus_scrofa
ENSAMXG00000008954	polr2d	100	90.210	ENSTGUG00000005773	POLR2D	93	94.737	Taeniopygia_guttata
ENSAMXG00000008954	polr2d	99	92.908	ENSTRUG00000004740	polr2d	94	97.744	Takifugu_rubripes
ENSAMXG00000008954	polr2d	99	93.617	ENSTNIG00000011210	polr2d	94	97.744	Tetraodon_nigroviridis
ENSAMXG00000008954	polr2d	82	95.726	ENSTBEG00000006081	POLR2D	100	95.726	Tupaia_belangeri
ENSAMXG00000008954	polr2d	82	95.726	ENSTTRG00000010055	POLR2D	100	95.726	Tursiops_truncatus
ENSAMXG00000008954	polr2d	90	95.349	ENSUAMG00000024374	POLR2D	98	94.615	Ursus_americanus
ENSAMXG00000008954	polr2d	84	95.000	ENSUMAG00000008280	POLR2D	100	97.115	Ursus_maritimus
ENSAMXG00000008954	polr2d	82	95.726	ENSVPAG00000007239	POLR2D	100	95.726	Vicugna_pacos
ENSAMXG00000008954	polr2d	100	90.210	ENSVVUG00000008616	POLR2D	94	94.737	Vulpes_vulpes
ENSAMXG00000008954	polr2d	100	90.210	ENSXETG00000002955	polr2d	93	93.182	Xenopus_tropicalis
ENSAMXG00000008954	polr2d	73	98.077	ENSXCOG00000012668	polr2d	100	98.077	Xiphophorus_couchianus
ENSAMXG00000008954	polr2d	73	98.077	ENSXMAG00000014031	polr2d	100	98.077	Xiphophorus_maculatus