EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000009000 (Gene tree)
Gene ID: 103041022
Gene Symbol: smpd3
Alias: neutral smase2|si:ch73-316n6.2
Full Name: sphingomyelin phosphodiesterase 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 45699 bases
Position: chr24:25839479-25885177
Accession: 103041022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009256	Exo_endo_phos	PF03372.23	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009256	-	1842	XM_022683891	ENSAMXP00000009256	613 (aa)	XP_022539612	W5KNU4

Gene Model

Click here to download ENSAMXG00000009000's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00600	Sphingolipid metabolism	KEGG
amex01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000009000	smpd3	99	43.178	ENSAMXG00000015890	smpd5	99	43.178

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000009000	smpd3	100	41.667	ENSAPOG00000005846	smpd5	96	49.226	Acanthochromis_polyacanthus
ENSAMXG00000009000	smpd3	77	42.424	ENSAMEG00000006154	-	96	42.395	Ailuropoda_melanoleuca
ENSAMXG00000009000	smpd3	100	41.262	ENSACIG00000015732	smpd5	99	41.262	Amphilophus_citrinellus
ENSAMXG00000009000	smpd3	85	48.916	ENSAOCG00000001729	smpd5	96	48.916	Amphiprion_ocellaris
ENSAMXG00000009000	smpd3	100	41.827	ENSAPEG00000010110	smpd5	96	49.226	Amphiprion_percula
ENSAMXG00000009000	smpd3	99	41.129	ENSATEG00000005476	smpd5	99	41.129	Anabas_testudineus
ENSAMXG00000009000	smpd3	94	43.396	ENSACAG00000005338	-	99	43.396	Anolis_carolinensis
ENSAMXG00000009000	smpd3	99	41.993	ENSACLG00000004150	smpd5	92	50.649	Astatotilapia_calliptera
ENSAMXG00000009000	smpd3	75	39.655	ENSBTAG00000015040	-	94	42.262	Bos_taurus
ENSAMXG00000009000	smpd3	62	70.588	ENSCAFG00020018801	-	97	42.017	Canis_lupus_dingo
ENSAMXG00000009000	smpd3	77	50.804	ENSCPBG00000007123	-	93	50.482	Chrysemys_picta_bellii
ENSAMXG00000009000	smpd3	77	46.753	ENSCGRG00001020226	Smpd5	91	46.753	Cricetulus_griseus_chok1gshd
ENSAMXG00000009000	smpd3	77	46.753	ENSCGRG00000016807	Smpd5	91	46.753	Cricetulus_griseus_crigri
ENSAMXG00000009000	smpd3	90	41.547	ENSCSEG00000004339	smpd5	88	41.822	Cynoglossus_semilaevis
ENSAMXG00000009000	smpd3	100	41.063	ENSDARG00000059811	smpd5	100	41.063	Danio_rerio
ENSAMXG00000009000	smpd3	76	46.078	ENSEASG00005009745	-	94	45.223	Equus_asinus_asinus
ENSAMXG00000009000	smpd3	78	45.223	ENSECAG00000011998	-	94	45.223	Equus_caballus
ENSAMXG00000009000	smpd3	100	41.401	ENSELUG00000002998	smpd5	99	41.784	Esox_lucius
ENSAMXG00000009000	smpd3	100	56.175	ENSFCAG00000023364	SMPD3	100	56.175	Felis_catus
ENSAMXG00000009000	smpd3	83	42.218	ENSGMOG00000006983	smpd5	100	42.607	Gadus_morhua
ENSAMXG00000009000	smpd3	99	41.734	ENSGAFG00000005978	smpd5	99	41.734	Gambusia_affinis
ENSAMXG00000009000	smpd3	81	46.746	ENSGAGG00000010557	-	99	46.746	Gopherus_agassizii
ENSAMXG00000009000	smpd3	99	42.320	ENSHBUG00000017212	smpd5	92	51.299	Haplochromis_burtoni
ENSAMXG00000009000	smpd3	99	40.843	ENSHCOG00000005211	smpd5	99	40.843	Hippocampus_comes
ENSAMXG00000009000	smpd3	99	44.103	ENSIPUG00000007675	Smpd3	99	44.103	Ictalurus_punctatus
ENSAMXG00000009000	smpd3	82	44.880	ENSSTOG00000026841	-	97	44.745	Ictidomys_tridecemlineatus
ENSAMXG00000009000	smpd3	76	49.355	ENSKMAG00000014523	smpd5	93	49.355	Kryptolebias_marmoratus
ENSAMXG00000009000	smpd3	100	40.575	ENSLBEG00000000634	smpd5	99	40.575	Labrus_bergylta
ENSAMXG00000009000	smpd3	99	41.301	ENSMAMG00000012885	smpd5	99	41.301	Mastacembelus_armatus
ENSAMXG00000009000	smpd3	99	42.157	ENSMZEG00005014373	smpd5	98	42.157	Maylandia_zebra
ENSAMXG00000009000	smpd3	82	42.151	ENSMICG00000044882	-	97	42.151	Microcebus_murinus
ENSAMXG00000009000	smpd3	75	47.869	ENSMOCG00000004813	Smpd5	88	47.869	Microtus_ochrogaster
ENSAMXG00000009000	smpd3	99	52.889	ENSMODG00000005091	SMPD3	99	53.333	Monodelphis_domestica
ENSAMXG00000009000	smpd3	84	43.626	ENSMODG00000024098	-	95	45.455	Monodelphis_domestica
ENSAMXG00000009000	smpd3	61	48.693	ENSMPUG00000007287	-	97	48.693	Mustela_putorius_furo
ENSAMXG00000009000	smpd3	99	42.320	ENSNBRG00000015871	smpd5	98	42.320	Neolamprologus_brichardi
ENSAMXG00000009000	smpd3	62	61.518	ENSMEUG00000015228	-	90	61.619	Notamacropus_eugenii
ENSAMXG00000009000	smpd3	99	42.114	ENSONIG00000003005	smpd5	98	42.114	Oreochromis_niloticus
ENSAMXG00000009000	smpd3	59	42.507	ENSOANG00000015137	-	96	43.869	Ornithorhynchus_anatinus
ENSAMXG00000009000	smpd3	99	40.747	ENSORLG00000007890	smpd5	98	40.747	Oryzias_latipes
ENSAMXG00000009000	smpd3	99	40.909	ENSORLG00020014621	smpd5	98	40.909	Oryzias_latipes_hni
ENSAMXG00000009000	smpd3	99	41.262	ENSORLG00015020862	smpd5	98	41.262	Oryzias_latipes_hsok
ENSAMXG00000009000	smpd3	99	41.042	ENSOMEG00000021400	smpd5	98	41.109	Oryzias_melastigma
ENSAMXG00000009000	smpd3	75	42.284	ENSOARG00000015429	-	85	42.424	Ovis_aries
ENSAMXG00000009000	smpd3	100	56.325	ENSPPRG00000012973	SMPD3	100	56.325	Panthera_pardus
ENSAMXG00000009000	smpd3	76	46.732	ENSPPRG00000024542	-	92	46.732	Panthera_pardus
ENSAMXG00000009000	smpd3	100	55.663	ENSPTIG00000006728	SMPD3	100	55.663	Panthera_tigris_altaica
ENSAMXG00000009000	smpd3	100	43.930	ENSPKIG00000019783	smpd5	100	43.930	Paramormyrops_kingsleyae
ENSAMXG00000009000	smpd3	99	77.698	ENSPKIG00000015630	smpd3	99	73.488	Paramormyrops_kingsleyae
ENSAMXG00000009000	smpd3	100	40.549	ENSPMGG00000011984	smpd5	100	40.228	Periophthalmus_magnuspinnatus
ENSAMXG00000009000	smpd3	81	41.761	ENSPEMG00000015740	Smpd5	94	41.761	Peromyscus_maniculatus_bairdii
ENSAMXG00000009000	smpd3	79	46.078	ENSPCIG00000009107	-	91	46.078	Phascolarctos_cinereus
ENSAMXG00000009000	smpd3	99	42.557	ENSPFOG00000002379	smpd5	99	42.557	Poecilia_formosa
ENSAMXG00000009000	smpd3	99	42.927	ENSPLAG00000015772	smpd5	99	42.927	Poecilia_latipinna
ENSAMXG00000009000	smpd3	99	42.114	ENSPMEG00000001599	smpd5	99	42.114	Poecilia_mexicana
ENSAMXG00000009000	smpd3	99	42.155	ENSPREG00000000831	smpd5	99	42.155	Poecilia_reticulata
ENSAMXG00000009000	smpd3	81	50.974	ENSPNYG00000015647	smpd5	92	50.974	Pundamilia_nyererei
ENSAMXG00000009000	smpd3	99	42.857	ENSPNAG00000018539	smpd5	99	42.857	Pygocentrus_nattereri
ENSAMXG00000009000	smpd3	100	85.169	ENSPNAG00000001774	smpd3	100	84.581	Pygocentrus_nattereri
ENSAMXG00000009000	smpd3	79	42.424	ENSSHAG00000004065	-	95	42.424	Sarcophilus_harrisii
ENSAMXG00000009000	smpd3	99	52.836	ENSSHAG00000006412	SMPD3	99	53.284	Sarcophilus_harrisii
ENSAMXG00000009000	smpd3	100	41.707	ENSSFOG00015000870	smpd5	99	41.707	Scleropages_formosus
ENSAMXG00000009000	smpd3	99	41.961	ENSSMAG00000020132	smpd5	99	42.532	Scophthalmus_maximus
ENSAMXG00000009000	smpd3	99	41.586	ENSSDUG00000005881	smpd5	99	41.586	Seriola_dumerili
ENSAMXG00000009000	smpd3	99	41.262	ENSSLDG00000015320	smpd5	99	41.262	Seriola_lalandi_dorsalis
ENSAMXG00000009000	smpd3	82	50.789	ENSSPAG00000007973	smpd5	93	50.789	Stegastes_partitus
ENSAMXG00000009000	smpd3	99	42.671	ENSTRUG00000014862	smpd5	99	42.671	Takifugu_rubripes
ENSAMXG00000009000	smpd3	99	42.626	ENSTNIG00000018420	smpd5	99	42.626	Tetraodon_nigroviridis
ENSAMXG00000009000	smpd3	100	59.701	ENSXETG00000006675	smpd3	100	59.791	Xenopus_tropicalis
ENSAMXG00000009000	smpd3	82	51.282	ENSXETG00000031246	-	97	50.629	Xenopus_tropicalis
ENSAMXG00000009000	smpd3	99	41.789	ENSXCOG00000019783	smpd5	99	41.653	Xiphophorus_couchianus
ENSAMXG00000009000	smpd3	99	42.080	ENSXMAG00000013998	smpd5	99	42.080	Xiphophorus_maculatus