EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000009052 (Gene tree)
Gene ID: 103044920
Gene Symbol: ercc2
Alias: XPD|zgc:56365
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9756 bases
Position: chr1:16644626-16654381
Accession: 103044920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000053182	ResIII	PF04851.15	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000037605	-	2970	-	ENSAMXP00000053723	717 (aa)	-	-
ENSAMXT00000009302	-	2860	XM_007245964	ENSAMXP00000009302	760 (aa)	XP_007246026	W5KNZ0
ENSAMXT00000031919	-	1998	-	ENSAMXP00000053182	665 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000009052's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03022	Basal transcription factors	KEGG
amex03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009052's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000009052	ercc2	99	84.639	ENSG00000104884	ERCC2	97	84.639	Homo_sapiens
ENSAMXG00000009052	ercc2	99	94.419	ENSAPOG00000000375	ercc2	99	94.419	Acanthochromis_polyacanthus
ENSAMXG00000009052	ercc2	99	95.181	ENSACIG00000008002	ercc2	98	95.181	Amphilophus_citrinellus
ENSAMXG00000009052	ercc2	99	92.492	ENSAOCG00000016153	ercc2	99	92.492	Amphiprion_ocellaris
ENSAMXG00000009052	ercc2	99	92.342	ENSAPEG00000016712	ercc2	99	92.342	Amphiprion_percula
ENSAMXG00000009052	ercc2	99	94.127	ENSATEG00000005268	ercc2	97	94.127	Anabas_testudineus
ENSAMXG00000009052	ercc2	99	84.337	ENSANAG00000022694	ERCC2	97	84.337	Aotus_nancymaae
ENSAMXG00000009052	ercc2	99	95.023	ENSACLG00000017573	ercc2	99	95.023	Astatotilapia_calliptera
ENSAMXG00000009052	ercc2	99	84.639	ENSCJAG00000012716	ERCC2	97	84.639	Callithrix_jacchus
ENSAMXG00000009052	ercc2	99	85.241	ENSCAFG00020011390	ERCC2	98	85.241	Canis_lupus_dingo
ENSAMXG00000009052	ercc2	99	69.499	ENSTSYG00000026723	ERCC2	98	69.499	Carlito_syrichta
ENSAMXG00000009052	ercc2	99	82.212	ENSCCAG00000019831	ERCC2	97	82.212	Cebus_capucinus
ENSAMXG00000009052	ercc2	99	84.639	ENSCANG00000040683	ERCC2	97	84.639	Colobus_angolensis_palliatus
ENSAMXG00000009052	ercc2	99	89.910	ENSCSEG00000006041	ercc2	99	89.910	Cynoglossus_semilaevis
ENSAMXG00000009052	ercc2	99	82.530	ENSEASG00005013856	ERCC2	97	82.530	Equus_asinus_asinus
ENSAMXG00000009052	ercc2	99	94.578	ENSELUG00000018055	ercc2	99	94.578	Esox_lucius
ENSAMXG00000009052	ercc2	99	85.241	ENSFCAG00000002679	ERCC2	97	85.241	Felis_catus
ENSAMXG00000009052	ercc2	99	95.331	ENSFHEG00000000072	ercc2	97	95.331	Fundulus_heteroclitus
ENSAMXG00000009052	ercc2	99	84.637	ENSGAGG00000009493	ERCC2	98	84.637	Gopherus_agassizii
ENSAMXG00000009052	ercc2	99	84.639	ENSGGOG00000015842	ERCC2	97	84.639	Gorilla_gorilla
ENSAMXG00000009052	ercc2	99	94.153	ENSHBUG00000002187	ercc2	99	94.153	Haplochromis_burtoni
ENSAMXG00000009052	ercc2	99	93.976	ENSLBEG00000010573	ercc2	90	93.976	Labrus_bergylta
ENSAMXG00000009052	ercc2	99	84.639	ENSMFAG00000037898	ERCC2	97	84.639	Macaca_fascicularis
ENSAMXG00000009052	ercc2	99	84.639	ENSMMUG00000014419	ERCC2	97	84.639	Macaca_mulatta
ENSAMXG00000009052	ercc2	99	84.639	ENSMNEG00000042641	ERCC2	97	84.639	Macaca_nemestrina
ENSAMXG00000009052	ercc2	99	84.615	ENSMLEG00000043492	ERCC2	97	84.615	Mandrillus_leucophaeus
ENSAMXG00000009052	ercc2	99	94.127	ENSMAMG00000016724	ercc2	98	94.127	Mastacembelus_armatus
ENSAMXG00000009052	ercc2	99	95.030	ENSMZEG00005024441	ercc2	99	95.030	Maylandia_zebra
ENSAMXG00000009052	ercc2	99	84.639	ENSMICG00000000635	ERCC2	97	84.639	Microcebus_murinus
ENSAMXG00000009052	ercc2	99	89.608	ENSMMOG00000005162	ercc2	97	89.608	Mola_mola
ENSAMXG00000009052	ercc2	99	93.072	ENSMALG00000005990	ercc2	98	93.072	Monopterus_albus
ENSAMXG00000009052	ercc2	99	85.693	MGP_CAROLIEiJ_G0029287	Ercc2	97	85.693	Mus_caroli
ENSAMXG00000009052	ercc2	99	85.693	ENSMUSG00000030400	Ercc2	97	85.693	Mus_musculus
ENSAMXG00000009052	ercc2	99	85.693	MGP_PahariEiJ_G0021147	Ercc2	97	85.693	Mus_pahari
ENSAMXG00000009052	ercc2	99	85.542	MGP_SPRETEiJ_G0030371	Ercc2	97	85.542	Mus_spretus
ENSAMXG00000009052	ercc2	99	84.639	ENSPPAG00000044005	ERCC2	97	84.639	Pan_paniscus
ENSAMXG00000009052	ercc2	99	80.422	ENSPPRG00000000507	ERCC2	97	80.723	Panthera_pardus
ENSAMXG00000009052	ercc2	99	84.639	ENSPTRG00000011149	ERCC2	97	84.639	Pan_troglodytes
ENSAMXG00000009052	ercc2	99	84.615	ENSPANG00000032195	ERCC2	97	84.615	Papio_anubis
ENSAMXG00000009052	ercc2	100	91.429	ENSPKIG00000006883	ercc2	96	91.429	Paramormyrops_kingsleyae
ENSAMXG00000009052	ercc2	99	92.470	ENSPMGG00000000223	ercc2	99	92.470	Periophthalmus_magnuspinnatus
ENSAMXG00000009052	ercc2	99	94.578	ENSPLAG00000002626	ercc2	97	94.578	Poecilia_latipinna
ENSAMXG00000009052	ercc2	99	94.578	ENSPMEG00000002858	ercc2	97	94.578	Poecilia_mexicana
ENSAMXG00000009052	ercc2	99	89.759	ENSPREG00000019280	ercc2	97	89.759	Poecilia_reticulata
ENSAMXG00000009052	ercc2	99	94.294	ENSPNYG00000022007	ercc2	99	94.294	Pundamilia_nyererei
ENSAMXG00000009052	ercc2	99	96.235	ENSPNAG00000010434	ercc2	99	96.235	Pygocentrus_nattereri
ENSAMXG00000009052	ercc2	99	84.639	ENSRROG00000040423	ERCC2	97	84.639	Rhinopithecus_roxellana
ENSAMXG00000009052	ercc2	99	84.789	ENSSBOG00000030257	ERCC2	98	84.789	Saimiri_boliviensis_boliviensis
ENSAMXG00000009052	ercc2	99	87.892	ENSSMAG00000019720	ercc2	99	87.892	Scophthalmus_maximus
ENSAMXG00000009052	ercc2	99	93.825	ENSSDUG00000002397	ercc2	99	93.825	Seriola_dumerili
ENSAMXG00000009052	ercc2	99	93.976	ENSSLDG00000020353	ercc2	99	93.976	Seriola_lalandi_dorsalis
ENSAMXG00000009052	ercc2	99	94.729	ENSSPAG00000002074	ercc2	98	94.729	Stegastes_partitus
ENSAMXG00000009052	ercc2	99	93.675	ENSTRUG00000007303	ercc2	98	93.675	Takifugu_rubripes
ENSAMXG00000009052	ercc2	99	85.241	ENSUAMG00000019562	ERCC2	98	85.241	Ursus_americanus
ENSAMXG00000009052	ercc2	99	89.759	ENSXMAG00000003922	ercc2	97	89.759	Xiphophorus_maculatus