EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000009140 (Gene tree)
Gene ID: 103032160
Gene Symbol: ddx21
Alias: cb960|wu:fi30c07|wu:fi34d08
Full Name: DExD-box helicase 21
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 22844 bases
Position: chr21:20296495-20319338
Accession: 103032160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030407	GUCT	PF08152.12	7.8e-35	1	1
ENSAMXP00000009410	GUCT	PF08152.12	3.4e-22	1	1
ENSAMXP00000030407	ResIII	PF04851.15	1.9e-09	1	1
ENSAMXP00000009410	ResIII	PF04851.15	2.9e-09	1	1
ENSAMXP00000009410	DEAD	PF00270.29	7.2e-46	1	1
ENSAMXP00000030407	DEAD	PF00270.29	9.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009410	-	2130	-	ENSAMXP00000009410	709 (aa)	-	W5KP98
ENSAMXT00000051721	-	7222	XM_007253181	ENSAMXP00000030407	784 (aa)	XP_007253243	UPI000BBD7165

Gene Model

Click here to download ENSAMXG00000009140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000009140	ddx21	50	32.692	ENSAMXG00000015550	DDX5	70	31.790
ENSAMXG00000009140	ddx21	53	31.443	ENSAMXG00000016919	ddx49	73	32.687
ENSAMXG00000009140	ddx21	54	31.282	ENSAMXG00000030251	eif4a1a	92	31.378
ENSAMXG00000009140	ddx21	54	30.848	ENSAMXG00000010727	ddx47	78	30.964
ENSAMXG00000009140	ddx21	54	31.877	ENSAMXG00000019126	eif4a2	91	31.877
ENSAMXG00000009140	ddx21	53	31.973	ENSAMXG00000013396	ddx3xb	54	35.838
ENSAMXG00000009140	ddx21	55	30.123	ENSAMXG00000002956	DDX41	59	31.053
ENSAMXG00000009140	ddx21	54	31.783	ENSAMXG00000040730	eif4a1b	91	31.877
ENSAMXG00000009140	ddx21	58	33.175	ENSAMXG00000042612	-	81	33.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000009140	ddx21	86	68.489	ENSG00000165732	DDX21	77	73.540	Homo_sapiens
ENSAMXG00000009140	ddx21	53	87.037	ENSAPOG00000012269	ddx21	91	71.400	Acanthochromis_polyacanthus
ENSAMXG00000009140	ddx21	96	60.710	ENSAMEG00000017978	DDX21	78	64.232	Ailuropoda_melanoleuca
ENSAMXG00000009140	ddx21	77	80.651	ENSACIG00000006429	ddx21	90	74.294	Amphilophus_citrinellus
ENSAMXG00000009140	ddx21	86	75.323	ENSAOCG00000023174	ddx21	87	74.704	Amphiprion_ocellaris
ENSAMXG00000009140	ddx21	86	75.323	ENSAPEG00000007108	ddx21	87	74.704	Amphiprion_percula
ENSAMXG00000009140	ddx21	94	71.218	ENSATEG00000022194	ddx21	86	73.971	Anabas_testudineus
ENSAMXG00000009140	ddx21	87	69.219	ENSAPLG00000013022	-	89	68.927	Anas_platyrhynchos
ENSAMXG00000009140	ddx21	85	70.033	ENSACAG00000009829	DDX21	78	66.410	Anolis_carolinensis
ENSAMXG00000009140	ddx21	86	68.167	ENSANAG00000038109	DDX21	93	75.466	Aotus_nancymaae
ENSAMXG00000009140	ddx21	77	80.360	ENSACLG00000008248	ddx21	82	74.340	Astatotilapia_calliptera
ENSAMXG00000009140	ddx21	86	66.613	ENSBTAG00000014558	DDX21	69	73.458	Bos_taurus
ENSAMXG00000009140	ddx21	86	67.891	ENSCJAG00000012876	DDX21	70	73.540	Callithrix_jacchus
ENSAMXG00000009140	ddx21	86	67.476	ENSCAFG00000013791	DDX21	85	65.569	Canis_familiaris
ENSAMXG00000009140	ddx21	86	49.675	ENSCHIG00000006053	-	68	52.973	Capra_hircus
ENSAMXG00000009140	ddx21	86	67.311	ENSCHIG00000000248	-	87	63.293	Capra_hircus
ENSAMXG00000009140	ddx21	86	51.623	ENSCHIG00000014104	-	67	54.955	Capra_hircus
ENSAMXG00000009140	ddx21	86	68.285	ENSTSYG00000011231	DDX21	84	64.910	Carlito_syrichta
ENSAMXG00000009140	ddx21	86	53.420	ENSCAPG00000005945	DDX21	77	54.087	Cavia_aperea
ENSAMXG00000009140	ddx21	99	61.057	ENSCPOG00000015479	DDX21	84	64.706	Cavia_porcellus
ENSAMXG00000009140	ddx21	86	68.006	ENSCCAG00000026288	DDX21	95	73.235	Cebus_capucinus
ENSAMXG00000009140	ddx21	87	50.933	ENSCATG00000045019	-	79	50.549	Cercocebus_atys
ENSAMXG00000009140	ddx21	86	68.395	ENSCATG00000043540	DDX21	84	63.994	Cercocebus_atys
ENSAMXG00000009140	ddx21	86	67.258	ENSCLAG00000012235	DDX21	78	69.167	Chinchilla_lanigera
ENSAMXG00000009140	ddx21	97	55.222	ENSCHOG00000000234	DDX21	84	58.663	Choloepus_hoffmanni
ENSAMXG00000009140	ddx21	80	73.448	ENSCPBG00000019937	-	75	68.949	Chrysemys_picta_bellii
ENSAMXG00000009140	ddx21	92	66.066	ENSCPBG00000019934	-	89	67.132	Chrysemys_picta_bellii
ENSAMXG00000009140	ddx21	86	68.395	ENSCANG00000039926	DDX21	84	63.843	Colobus_angolensis_palliatus
ENSAMXG00000009140	ddx21	93	47.889	ENSCANG00000036110	-	79	49.687	Colobus_angolensis_palliatus
ENSAMXG00000009140	ddx21	86	59.217	ENSCGRG00001017824	-	86	55.988	Cricetulus_griseus_chok1gshd
ENSAMXG00000009140	ddx21	98	63.000	ENSCGRG00001016264	-	86	64.918	Cricetulus_griseus_chok1gshd
ENSAMXG00000009140	ddx21	86	59.380	ENSCGRG00000008450	-	86	56.138	Cricetulus_griseus_crigri
ENSAMXG00000009140	ddx21	98	63.000	ENSCGRG00000015134	-	86	64.918	Cricetulus_griseus_crigri
ENSAMXG00000009140	ddx21	75	78.996	ENSCSEG00000013939	ddx21	84	71.154	Cynoglossus_semilaevis
ENSAMXG00000009140	ddx21	86	75.444	ENSCVAG00000018333	ddx21	88	71.818	Cyprinodon_variegatus
ENSAMXG00000009140	ddx21	78	78.445	ENSDARG00000063626	ddx21	85	71.618	Danio_rerio
ENSAMXG00000009140	ddx21	96	61.440	ENSDNOG00000001680	DDX21	91	63.277	Dasypus_novemcinctus
ENSAMXG00000009140	ddx21	97	56.708	ENSDORG00000002202	Ddx21	82	60.671	Dipodomys_ordii
ENSAMXG00000009140	ddx21	86	68.344	ENSETEG00000014073	DDX21	84	63.568	Echinops_telfairi
ENSAMXG00000009140	ddx21	86	66.248	ENSEASG00005015598	DDX21	86	62.952	Equus_asinus_asinus
ENSAMXG00000009140	ddx21	86	68.116	ENSECAG00000010810	DDX21	87	63.135	Equus_caballus
ENSAMXG00000009140	ddx21	81	64.310	ENSEEUG00000005959	DDX21	94	60.574	Erinaceus_europaeus
ENSAMXG00000009140	ddx21	84	76.807	ENSELUG00000018856	ddx21	86	76.226	Esox_lucius
ENSAMXG00000009140	ddx21	86	68.821	ENSFCAG00000002109	DDX21	86	65.832	Felis_catus
ENSAMXG00000009140	ddx21	75	76.164	ENSFALG00000013022	-	89	72.500	Ficedula_albicollis
ENSAMXG00000009140	ddx21	75	71.561	ENSFALG00000013043	-	88	64.650	Ficedula_albicollis
ENSAMXG00000009140	ddx21	96	61.823	ENSFDAG00000007401	DDX21	84	65.512	Fukomys_damarensis
ENSAMXG00000009140	ddx21	86	71.957	ENSFHEG00000019089	ddx21	86	70.525	Fundulus_heteroclitus
ENSAMXG00000009140	ddx21	75	73.284	ENSGMOG00000012354	ddx21	89	74.223	Gadus_morhua
ENSAMXG00000009140	ddx21	79	71.250	ENSGALG00000042254	-	80	73.889	Gallus_gallus
ENSAMXG00000009140	ddx21	75	76.548	ENSGALG00000004144	-	89	68.760	Gallus_gallus
ENSAMXG00000009140	ddx21	83	73.525	ENSGAFG00000003427	ddx21	87	72.969	Gambusia_affinis
ENSAMXG00000009140	ddx21	75	80.961	ENSGACG00000016060	ddx21	89	80.541	Gasterosteus_aculeatus
ENSAMXG00000009140	ddx21	86	67.367	ENSGAGG00000022169	-	91	65.350	Gopherus_agassizii
ENSAMXG00000009140	ddx21	94	64.275	ENSGAGG00000022163	-	82	66.104	Gopherus_agassizii
ENSAMXG00000009140	ddx21	86	68.650	ENSGGOG00000005065	DDX21	84	63.843	Gorilla_gorilla
ENSAMXG00000009140	ddx21	77	80.360	ENSHBUG00000017638	ddx21	82	74.412	Haplochromis_burtoni
ENSAMXG00000009140	ddx21	86	66.989	ENSHGLG00000013902	DDX21	70	73.492	Heterocephalus_glaber_female
ENSAMXG00000009140	ddx21	86	67.472	ENSHGLG00100015956	DDX21	85	65.361	Heterocephalus_glaber_male
ENSAMXG00000009140	ddx21	75	77.222	ENSHCOG00000014503	ddx21	81	73.411	Hippocampus_comes
ENSAMXG00000009140	ddx21	85	81.630	ENSIPUG00000006972	ddx21	88	81.630	Ictalurus_punctatus
ENSAMXG00000009140	ddx21	94	64.402	ENSSTOG00000011572	DDX21	76	67.044	Ictidomys_tridecemlineatus
ENSAMXG00000009140	ddx21	86	65.539	ENSJJAG00000014035	Ddx21	67	73.734	Jaculus_jaculus
ENSAMXG00000009140	ddx21	77	80.108	ENSKMAG00000020766	ddx21	86	73.669	Kryptolebias_marmoratus
ENSAMXG00000009140	ddx21	82	74.924	ENSLBEG00000001244	ddx21	86	73.246	Labrus_bergylta
ENSAMXG00000009140	ddx21	77	77.577	ENSLACG00000000658	DDX21	93	78.373	Latimeria_chalumnae
ENSAMXG00000009140	ddx21	75	76.015	ENSLOCG00000009123	ddx21	86	68.787	Lepisosteus_oculatus
ENSAMXG00000009140	ddx21	86	68.006	ENSLAFG00000007962	DDX21	82	65.802	Loxodonta_africana
ENSAMXG00000009140	ddx21	86	68.558	ENSMFAG00000044838	DDX21	92	74.490	Macaca_fascicularis
ENSAMXG00000009140	ddx21	87	51.037	ENSMFAG00000033536	-	79	50.391	Macaca_fascicularis
ENSAMXG00000009140	ddx21	86	68.558	ENSMMUG00000001005	DDX21	84	63.691	Macaca_mulatta
ENSAMXG00000009140	ddx21	87	55.981	ENSMMUG00000032331	-	69	61.466	Macaca_mulatta
ENSAMXG00000009140	ddx21	86	68.558	ENSMNEG00000032825	DDX21	69	73.801	Macaca_nemestrina
ENSAMXG00000009140	ddx21	86	65.154	ENSMLEG00000028940	DDX21	90	74.522	Mandrillus_leucophaeus
ENSAMXG00000009140	ddx21	87	51.076	ENSMLEG00000028215	-	79	50.549	Mandrillus_leucophaeus
ENSAMXG00000009140	ddx21	98	66.990	ENSMAMG00000019683	ddx21	91	69.440	Mastacembelus_armatus
ENSAMXG00000009140	ddx21	77	80.360	ENSMZEG00005011618	ddx21	86	74.412	Maylandia_zebra
ENSAMXG00000009140	ddx21	75	75.325	ENSMGAG00000004298	DDX21	91	70.227	Meleagris_gallopavo
ENSAMXG00000009140	ddx21	94	62.432	ENSMAUG00000011153	Ddx21	84	64.877	Mesocricetus_auratus
ENSAMXG00000009140	ddx21	86	60.674	ENSMICG00000033371	-	87	65.758	Microcebus_murinus
ENSAMXG00000009140	ddx21	86	68.174	ENSMICG00000015112	-	84	64.574	Microcebus_murinus
ENSAMXG00000009140	ddx21	94	64.192	ENSMOCG00000020855	Ddx21	83	65.753	Microtus_ochrogaster
ENSAMXG00000009140	ddx21	69	80.493	ENSMMOG00000015938	ddx21	92	80.493	Mola_mola
ENSAMXG00000009140	ddx21	75	70.950	ENSMODG00000010727	DDX21	92	62.647	Monodelphis_domestica
ENSAMXG00000009140	ddx21	86	70.192	ENSMALG00000010489	ddx21	90	73.266	Monopterus_albus
ENSAMXG00000009140	ddx21	94	61.486	MGP_CAROLIEiJ_G0015388	Ddx21	83	65.303	Mus_caroli
ENSAMXG00000009140	ddx21	86	68.455	ENSMUSG00000020075	Ddx21	74	65.084	Mus_musculus
ENSAMXG00000009140	ddx21	86	68.455	MGP_SPRETEiJ_G0016199	Ddx21	74	64.931	Mus_spretus
ENSAMXG00000009140	ddx21	94	64.159	ENSMPUG00000004603	DDX21	84	65.134	Mustela_putorius_furo
ENSAMXG00000009140	ddx21	86	67.042	ENSMLUG00000023298	DDX21	74	65.072	Myotis_lucifugus
ENSAMXG00000009140	ddx21	98	59.292	ENSNGAG00000022273	Ddx21	79	64.969	Nannospalax_galili
ENSAMXG00000009140	ddx21	77	80.541	ENSNBRG00000006198	ddx21	86	74.594	Neolamprologus_brichardi
ENSAMXG00000009140	ddx21	86	68.489	ENSNLEG00000011591	DDX21	91	63.691	Nomascus_leucogenys
ENSAMXG00000009140	ddx21	72	68.979	ENSOPRG00000001640	DDX21	68	70.962	Ochotona_princeps
ENSAMXG00000009140	ddx21	76	58.442	ENSODEG00000012879	-	81	56.167	Octodon_degus
ENSAMXG00000009140	ddx21	87	75.362	ENSONIG00000005499	ddx21	81	73.824	Oreochromis_niloticus
ENSAMXG00000009140	ddx21	88	62.536	ENSOANG00000004777	DDX21	87	62.647	Ornithorhynchus_anatinus
ENSAMXG00000009140	ddx21	86	68.226	ENSOCUG00000002888	DDX21	64	74.033	Oryctolagus_cuniculus
ENSAMXG00000009140	ddx21	87	73.752	ENSORLG00000010122	ddx21	90	77.683	Oryzias_latipes
ENSAMXG00000009140	ddx21	87	74.074	ENSORLG00020004409	ddx21	89	77.853	Oryzias_latipes_hni
ENSAMXG00000009140	ddx21	87	73.752	ENSORLG00015000051	ddx21	90	77.683	Oryzias_latipes_hsok
ENSAMXG00000009140	ddx21	87	75.362	ENSOMEG00000004523	ddx21	82	73.946	Oryzias_melastigma
ENSAMXG00000009140	ddx21	88	63.636	ENSOGAG00000001846	-	63	72.486	Otolemur_garnettii
ENSAMXG00000009140	ddx21	75	64.684	ENSOGAG00000031242	-	86	65.736	Otolemur_garnettii
ENSAMXG00000009140	ddx21	86	67.472	ENSOARG00000005307	DDX21	77	64.809	Ovis_aries
ENSAMXG00000009140	ddx21	86	68.489	ENSPPAG00000036670	DDX21	84	63.691	Pan_paniscus
ENSAMXG00000009140	ddx21	86	69.156	ENSPPRG00000012523	DDX21	86	65.832	Panthera_pardus
ENSAMXG00000009140	ddx21	86	69.318	ENSPTIG00000007268	DDX21	86	65.979	Panthera_tigris_altaica
ENSAMXG00000009140	ddx21	86	68.489	ENSPTRG00000002563	DDX21	84	63.691	Pan_troglodytes
ENSAMXG00000009140	ddx21	86	68.395	ENSPANG00000022140	DDX21	69	73.801	Papio_anubis
ENSAMXG00000009140	ddx21	99	47.117	ENSPANG00000031334	-	76	54.671	Papio_anubis
ENSAMXG00000009140	ddx21	87	74.250	ENSPKIG00000014660	ddx21	77	78.141	Paramormyrops_kingsleyae
ENSAMXG00000009140	ddx21	80	72.474	ENSPSIG00000004724	DDX21	91	67.190	Pelodiscus_sinensis
ENSAMXG00000009140	ddx21	94	62.568	ENSPEMG00000018513	Ddx21	82	65.145	Peromyscus_maniculatus_bairdii
ENSAMXG00000009140	ddx21	75	75.000	ENSPCIG00000015505	DDX21	94	65.357	Phascolarctos_cinereus
ENSAMXG00000009140	ddx21	75	80.407	ENSPFOG00000016196	ddx21	83	71.125	Poecilia_formosa
ENSAMXG00000009140	ddx21	84	72.607	ENSPLAG00000017849	ddx21	93	70.762	Poecilia_latipinna
ENSAMXG00000009140	ddx21	87	73.913	ENSPMEG00000014571	ddx21	83	71.429	Poecilia_mexicana
ENSAMXG00000009140	ddx21	86	68.650	ENSPPYG00000002389	DDX21	84	63.691	Pongo_abelii
ENSAMXG00000009140	ddx21	71	72.000	ENSPCAG00000016697	DDX21	96	61.357	Procavia_capensis
ENSAMXG00000009140	ddx21	97	60.402	ENSPCOG00000019284	DDX21	82	62.901	Propithecus_coquereli
ENSAMXG00000009140	ddx21	86	67.624	ENSPVAG00000009521	DDX21	83	65.802	Pteropus_vampyrus
ENSAMXG00000009140	ddx21	74	80.755	ENSPNYG00000015566	ddx21	91	78.883	Pundamilia_nyererei
ENSAMXG00000009140	ddx21	87	81.567	ENSPNAG00000004814	ddx21	98	81.295	Pygocentrus_nattereri
ENSAMXG00000009140	ddx21	94	62.027	ENSRNOG00000048990	AABR07037356.1	84	63.868	Rattus_norvegicus
ENSAMXG00000009140	ddx21	94	62.432	ENSRNOG00000043099	Ddx21	84	64.318	Rattus_norvegicus
ENSAMXG00000009140	ddx21	86	63.961	ENSRBIG00000035862	-	72	68.739	Rhinopithecus_bieti
ENSAMXG00000009140	ddx21	86	68.395	ENSRBIG00000043721	-	89	74.454	Rhinopithecus_bieti
ENSAMXG00000009140	ddx21	86	68.395	ENSRROG00000033387	DDX21	84	63.994	Rhinopithecus_roxellana
ENSAMXG00000009140	ddx21	86	50.081	ENSSBOG00000025801	-	70	55.159	Saimiri_boliviensis_boliviensis
ENSAMXG00000009140	ddx21	94	67.647	ENSSFOG00015014610	ddx21	86	81.536	Scleropages_formosus
ENSAMXG00000009140	ddx21	75	81.146	ENSSMAG00000003932	ddx21	89	71.450	Scophthalmus_maximus
ENSAMXG00000009140	ddx21	94	68.267	ENSSDUG00000021420	ddx21	86	72.794	Seriola_dumerili
ENSAMXG00000009140	ddx21	75	79.667	ENSSLDG00000025665	ddx21	89	77.740	Seriola_lalandi_dorsalis
ENSAMXG00000009140	ddx21	86	69.530	ENSSPUG00000004088	DDX21	76	75.780	Sphenodon_punctatus
ENSAMXG00000009140	ddx21	75	80.961	ENSSPAG00000013142	ddx21	86	73.591	Stegastes_partitus
ENSAMXG00000009140	ddx21	86	67.857	ENSSSCG00000010247	DDX21	76	65.751	Sus_scrofa
ENSAMXG00000009140	ddx21	75	76.536	ENSTGUG00000003810	-	80	77.574	Taeniopygia_guttata
ENSAMXG00000009140	ddx21	94	68.901	ENSTRUG00000017570	ddx21	92	71.084	Takifugu_rubripes
ENSAMXG00000009140	ddx21	80	77.509	ENSTNIG00000013798	ddx21	93	82.478	Tetraodon_nigroviridis
ENSAMXG00000009140	ddx21	86	60.877	ENSTBEG00000002310	DDX21	78	58.898	Tupaia_belangeri
ENSAMXG00000009140	ddx21	86	66.292	ENSTTRG00000016398	DDX21	85	63.516	Tursiops_truncatus
ENSAMXG00000009140	ddx21	86	68.860	ENSUMAG00000007735	DDX21	85	65.051	Ursus_maritimus
ENSAMXG00000009140	ddx21	70	73.200	ENSVPAG00000000627	DDX21	93	62.402	Vicugna_pacos
ENSAMXG00000009140	ddx21	86	67.576	ENSVVUG00000020486	DDX21	84	65.667	Vulpes_vulpes
ENSAMXG00000009140	ddx21	84	72.757	ENSXCOG00000009654	ddx21	88	72.397	Xiphophorus_couchianus
ENSAMXG00000009140	ddx21	84	72.537	ENSXMAG00000008199	ddx21	87	72.189	Xiphophorus_maculatus