EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000009189 (Gene tree)
Gene ID: 103046998
Gene Symbol: ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 13912 bases
Position: chrAPWO02000139.1:3031720-3045631
Accession: 103046998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009447	DBP10CT	PF08147.12	2.2e-16	1	1
ENSAMXP00000009447	DEAD	PF00270.29	9e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009447	-	5691	XM_007253995	ENSAMXP00000009447	856 (aa)	XP_007254057	W5KPD5

Gene Model

Click here to download ENSAMXG00000009189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000009189	ddx54	50	31.910	ENSAMXG00000024269	ddx18	59	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000009189	ddx54	97	60.563	ENSG00000123064	DDX54	100	87.019	Homo_sapiens
ENSAMXG00000009189	ddx54	98	78.158	ENSAPOG00000008602	ddx54	100	78.447	Acanthochromis_polyacanthus
ENSAMXG00000009189	ddx54	99	60.255	ENSAMEG00000008775	DDX54	95	60.875	Ailuropoda_melanoleuca
ENSAMXG00000009189	ddx54	100	75.029	ENSACIG00000019104	ddx54	100	74.627	Amphilophus_citrinellus
ENSAMXG00000009189	ddx54	98	77.778	ENSAOCG00000008449	ddx54	100	78.306	Amphiprion_ocellaris
ENSAMXG00000009189	ddx54	98	77.778	ENSAPEG00000014287	ddx54	100	78.306	Amphiprion_percula
ENSAMXG00000009189	ddx54	100	76.416	ENSATEG00000018529	ddx54	100	76.185	Anabas_testudineus
ENSAMXG00000009189	ddx54	95	65.403	ENSAPLG00000013191	DDX54	99	65.648	Anas_platyrhynchos
ENSAMXG00000009189	ddx54	94	65.361	ENSACAG00000004703	DDX54	96	64.785	Anolis_carolinensis
ENSAMXG00000009189	ddx54	90	54.337	ENSANAG00000032241	-	95	53.966	Aotus_nancymaae
ENSAMXG00000009189	ddx54	99	51.422	ENSANAG00000032761	-	95	52.103	Aotus_nancymaae
ENSAMXG00000009189	ddx54	100	76.986	ENSACLG00000013176	ddx54	100	77.687	Astatotilapia_calliptera
ENSAMXG00000009189	ddx54	97	60.638	ENSBTAG00000011930	DDX54	90	60.490	Bos_taurus
ENSAMXG00000009189	ddx54	88	46.323	WBGene00022378	Y94H6A.5	91	45.904	Caenorhabditis_elegans
ENSAMXG00000009189	ddx54	87	63.158	ENSCJAG00000010039	DDX54	81	63.325	Callithrix_jacchus
ENSAMXG00000009189	ddx54	66	51.736	ENSCAFG00000009029	DDX54	99	51.910	Canis_familiaris
ENSAMXG00000009189	ddx54	97	60.849	ENSCAFG00020017643	DDX54	96	60.875	Canis_lupus_dingo
ENSAMXG00000009189	ddx54	97	60.047	ENSCHIG00000026798	DDX54	96	60.047	Capra_hircus
ENSAMXG00000009189	ddx54	95	58.475	ENSTSYG00000007898	DDX54	93	58.596	Carlito_syrichta
ENSAMXG00000009189	ddx54	95	59.951	ENSCAPG00000001482	DDX54	99	56.763	Cavia_aperea
ENSAMXG00000009189	ddx54	98	60.000	ENSCPOG00000020649	DDX54	96	59.324	Cavia_porcellus
ENSAMXG00000009189	ddx54	98	60.627	ENSCCAG00000022625	DDX54	97	60.981	Cebus_capucinus
ENSAMXG00000009189	ddx54	98	59.604	ENSCATG00000041943	DDX54	97	59.584	Cercocebus_atys
ENSAMXG00000009189	ddx54	97	59.312	ENSCLAG00000010748	DDX54	96	59.312	Chinchilla_lanigera
ENSAMXG00000009189	ddx54	95	60.168	ENSCSAG00000002432	DDX54	93	58.681	Chlorocebus_sabaeus
ENSAMXG00000009189	ddx54	77	64.297	ENSCPBG00000017982	DDX54	85	64.297	Chrysemys_picta_bellii
ENSAMXG00000009189	ddx54	88	57.050	ENSCING00000004789	-	92	56.675	Ciona_intestinalis
ENSAMXG00000009189	ddx54	89	54.759	ENSCSAVG00000008916	-	98	70.997	Ciona_savignyi
ENSAMXG00000009189	ddx54	90	83.966	ENSCANG00000020637	DDX54	100	83.966	Colobus_angolensis_palliatus
ENSAMXG00000009189	ddx54	100	60.735	ENSCGRG00001014803	Ddx54	96	61.810	Cricetulus_griseus_chok1gshd
ENSAMXG00000009189	ddx54	100	60.596	ENSCGRG00000002827	Ddx54	96	61.547	Cricetulus_griseus_crigri
ENSAMXG00000009189	ddx54	98	73.263	ENSCSEG00000016462	ddx54	100	73.843	Cynoglossus_semilaevis
ENSAMXG00000009189	ddx54	100	75.433	ENSCVAG00000022404	ddx54	100	75.489	Cyprinodon_variegatus
ENSAMXG00000009189	ddx54	100	74.074	ENSDARG00000105286	ddx54	100	74.190	Danio_rerio
ENSAMXG00000009189	ddx54	97	60.685	ENSDNOG00000032913	DDX54	96	61.203	Dasypus_novemcinctus
ENSAMXG00000009189	ddx54	81	55.603	ENSDORG00000003399	Ddx54	95	54.812	Dipodomys_ordii
ENSAMXG00000009189	ddx54	86	44.895	FBgn0052344	CG32344	89	45.817	Drosophila_melanogaster
ENSAMXG00000009189	ddx54	51	86.395	ENSETEG00000008430	-	52	86.395	Echinops_telfairi
ENSAMXG00000009189	ddx54	82	57.183	ENSEBUG00000008886	ddx54	97	58.116	Eptatretus_burgeri
ENSAMXG00000009189	ddx54	88	58.161	ENSEASG00005009501	DDX54	100	54.300	Equus_asinus_asinus
ENSAMXG00000009189	ddx54	92	69.149	ENSECAG00000012890	DDX54	95	69.149	Equus_caballus
ENSAMXG00000009189	ddx54	63	89.873	ENSEEUG00000008296	-	62	89.873	Erinaceus_europaeus
ENSAMXG00000009189	ddx54	100	75.679	ENSELUG00000013533	ddx54	100	75.679	Esox_lucius
ENSAMXG00000009189	ddx54	97	60.284	ENSFCAG00000027806	DDX54	96	60.638	Felis_catus
ENSAMXG00000009189	ddx54	92	66.667	ENSFALG00000007737	DDX54	100	66.499	Ficedula_albicollis
ENSAMXG00000009189	ddx54	93	70.316	ENSFDAG00000019953	DDX54	95	70.316	Fukomys_damarensis
ENSAMXG00000009189	ddx54	100	75.231	ENSFHEG00000018425	ddx54	100	75.058	Fundulus_heteroclitus
ENSAMXG00000009189	ddx54	96	73.022	ENSGMOG00000011746	ddx54	100	73.501	Gadus_morhua
ENSAMXG00000009189	ddx54	95	66.626	ENSGALG00000007490	DDX54	97	66.339	Gallus_gallus
ENSAMXG00000009189	ddx54	100	73.984	ENSGAFG00000010336	ddx54	100	73.751	Gambusia_affinis
ENSAMXG00000009189	ddx54	100	72.386	ENSGACG00000016793	ddx54	100	72.159	Gasterosteus_aculeatus
ENSAMXG00000009189	ddx54	95	68.044	ENSGAGG00000022803	DDX54	100	68.284	Gopherus_agassizii
ENSAMXG00000009189	ddx54	97	60.446	ENSGGOG00000010414	DDX54	96	60.798	Gorilla_gorilla
ENSAMXG00000009189	ddx54	97	60.520	ENSHGLG00000014411	DDX54	96	59.719	Heterocephalus_glaber_female
ENSAMXG00000009189	ddx54	97	60.710	ENSHGLG00100018511	DDX54	96	59.906	Heterocephalus_glaber_male
ENSAMXG00000009189	ddx54	100	74.942	ENSHCOG00000019287	ddx54	100	74.942	Hippocampus_comes
ENSAMXG00000009189	ddx54	100	81.250	ENSIPUG00000015556	Ddx54	100	81.829	Ictalurus_punctatus
ENSAMXG00000009189	ddx54	89	60.591	ENSSTOG00000004068	DDX54	100	60.976	Ictidomys_tridecemlineatus
ENSAMXG00000009189	ddx54	98	61.710	ENSJJAG00000015712	Ddx54	96	61.369	Jaculus_jaculus
ENSAMXG00000009189	ddx54	100	75.465	ENSKMAG00000017520	ddx54	100	75.349	Kryptolebias_marmoratus
ENSAMXG00000009189	ddx54	100	72.248	ENSLBEG00000019480	ddx54	100	72.101	Labrus_bergylta
ENSAMXG00000009189	ddx54	96	68.706	ENSLACG00000008944	DDX54	96	69.150	Latimeria_chalumnae
ENSAMXG00000009189	ddx54	100	74.797	ENSLOCG00000008485	ddx54	100	74.651	Lepisosteus_oculatus
ENSAMXG00000009189	ddx54	90	52.469	ENSLAFG00000027782	DDX54	100	52.340	Loxodonta_africana
ENSAMXG00000009189	ddx54	98	59.513	ENSMFAG00000043636	DDX54	97	59.631	Macaca_fascicularis
ENSAMXG00000009189	ddx54	98	59.375	ENSMMUG00000021795	DDX54	97	59.631	Macaca_mulatta
ENSAMXG00000009189	ddx54	98	53.935	ENSMNEG00000043605	DDX54	97	54.325	Macaca_nemestrina
ENSAMXG00000009189	ddx54	98	56.678	ENSMLEG00000038981	DDX54	96	56.928	Mandrillus_leucophaeus
ENSAMXG00000009189	ddx54	100	77.624	ENSMAMG00000012784	ddx54	99	77.491	Mastacembelus_armatus
ENSAMXG00000009189	ddx54	100	75.117	ENSMZEG00005018773	ddx54	100	75.818	Maylandia_zebra
ENSAMXG00000009189	ddx54	95	65.742	ENSMGAG00000009183	DDX54	100	65.259	Meleagris_gallopavo
ENSAMXG00000009189	ddx54	98	61.294	ENSMAUG00000011051	Ddx54	96	62.061	Mesocricetus_auratus
ENSAMXG00000009189	ddx54	100	59.609	ENSMICG00000012217	DDX54	96	59.674	Microcebus_murinus
ENSAMXG00000009189	ddx54	100	60.855	ENSMOCG00000010835	Ddx54	96	60.789	Microtus_ochrogaster
ENSAMXG00000009189	ddx54	98	73.634	ENSMMOG00000009634	ddx54	100	73.403	Mola_mola
ENSAMXG00000009189	ddx54	95	64.749	ENSMODG00000003413	DDX54	97	65.037	Monodelphis_domestica
ENSAMXG00000009189	ddx54	100	78.488	ENSMALG00000022098	ddx54	100	78.488	Monopterus_albus
ENSAMXG00000009189	ddx54	98	61.972	MGP_CAROLIEiJ_G0027665	Ddx54	96	62.676	Mus_caroli
ENSAMXG00000009189	ddx54	98	62.045	ENSMUSG00000029599	Ddx54	96	62.750	Mus_musculus
ENSAMXG00000009189	ddx54	98	61.234	MGP_PahariEiJ_G0024247	Ddx54	97	62.282	Mus_pahari
ENSAMXG00000009189	ddx54	98	61.610	MGP_SPRETEiJ_G0028665	Ddx54	97	62.326	Mus_spretus
ENSAMXG00000009189	ddx54	97	60.446	ENSMPUG00000002574	DDX54	96	59.579	Mustela_putorius_furo
ENSAMXG00000009189	ddx54	98	61.637	ENSNGAG00000021313	Ddx54	96	61.637	Nannospalax_galili
ENSAMXG00000009189	ddx54	84	75.855	ENSNBRG00000005588	ddx54	95	76.162	Neolamprologus_brichardi
ENSAMXG00000009189	ddx54	97	61.366	ENSNLEG00000000162	DDX54	96	60.610	Nomascus_leucogenys
ENSAMXG00000009189	ddx54	81	65.759	ENSMEUG00000015392	DDX54	99	65.994	Notamacropus_eugenii
ENSAMXG00000009189	ddx54	88	54.211	ENSOPRG00000012000	DDX54	86	54.928	Ochotona_princeps
ENSAMXG00000009189	ddx54	97	58.175	ENSODEG00000014863	DDX54	96	57.394	Octodon_degus
ENSAMXG00000009189	ddx54	98	59.064	ENSOCUG00000008932	DDX54	96	58.912	Oryctolagus_cuniculus
ENSAMXG00000009189	ddx54	100	73.727	ENSORLG00000007385	ddx54	98	74.556	Oryzias_latipes
ENSAMXG00000009189	ddx54	100	73.788	ENSORLG00020000858	ddx54	98	74.616	Oryzias_latipes_hni
ENSAMXG00000009189	ddx54	100	74.739	ENSORLG00015006956	ddx54	98	74.734	Oryzias_latipes_hsok
ENSAMXG00000009189	ddx54	98	75.682	ENSOMEG00000003663	ddx54	98	75.740	Oryzias_melastigma
ENSAMXG00000009189	ddx54	97	60.967	ENSOGAG00000004210	DDX54	96	61.176	Otolemur_garnettii
ENSAMXG00000009189	ddx54	97	60.213	ENSOARG00000008363	DDX54	96	60.116	Ovis_aries
ENSAMXG00000009189	ddx54	97	59.422	ENSPPAG00000042178	DDX54	96	60.936	Pan_paniscus
ENSAMXG00000009189	ddx54	97	58.274	ENSPPRG00000005223	DDX54	96	59.176	Panthera_pardus
ENSAMXG00000009189	ddx54	74	62.899	ENSPTIG00000019728	DDX54	89	62.162	Panthera_tigris_altaica
ENSAMXG00000009189	ddx54	97	59.629	ENSPTRG00000005483	DDX54	96	60.915	Pan_troglodytes
ENSAMXG00000009189	ddx54	98	59.375	ENSPANG00000008883	DDX54	97	59.400	Papio_anubis
ENSAMXG00000009189	ddx54	100	76.163	ENSPKIG00000018272	ddx54	98	76.163	Paramormyrops_kingsleyae
ENSAMXG00000009189	ddx54	54	79.221	ENSPSIG00000005055	DDX54	96	78.755	Pelodiscus_sinensis
ENSAMXG00000009189	ddx54	95	72.270	ENSPMGG00000010988	ddx54	99	72.393	Periophthalmus_magnuspinnatus
ENSAMXG00000009189	ddx54	100	60.959	ENSPEMG00000016701	Ddx54	96	61.208	Peromyscus_maniculatus_bairdii
ENSAMXG00000009189	ddx54	100	76.423	ENSPFOG00000019822	ddx54	100	75.958	Poecilia_formosa
ENSAMXG00000009189	ddx54	100	76.423	ENSPLAG00000004530	ddx54	100	75.958	Poecilia_latipinna
ENSAMXG00000009189	ddx54	100	76.423	ENSPMEG00000010803	ddx54	100	75.958	Poecilia_mexicana
ENSAMXG00000009189	ddx54	100	76.887	ENSPREG00000014372	ddx54	100	76.655	Poecilia_reticulata
ENSAMXG00000009189	ddx54	97	60.681	ENSPPYG00000004984	DDX54	96	61.150	Pongo_abelii
ENSAMXG00000009189	ddx54	97	57.227	ENSPCAG00000008462	DDX54	96	57.227	Procavia_capensis
ENSAMXG00000009189	ddx54	97	60.921	ENSPCOG00000006050	DDX54	96	61.105	Propithecus_coquereli
ENSAMXG00000009189	ddx54	90	81.176	ENSPVAG00000017347	DDX54	88	81.176	Pteropus_vampyrus
ENSAMXG00000009189	ddx54	100	83.178	ENSPNAG00000014459	ddx54	98	89.018	Pygocentrus_nattereri
ENSAMXG00000009189	ddx54	98	62.280	ENSRNOG00000001377	Ddx54	92	61.260	Rattus_norvegicus
ENSAMXG00000009189	ddx54	100	59.817	ENSRBIG00000032535	DDX54	96	60.186	Rhinopithecus_bieti
ENSAMXG00000009189	ddx54	100	55.795	ENSRROG00000029557	DDX54	95	56.577	Rhinopithecus_roxellana
ENSAMXG00000009189	ddx54	81	37.611	YDL031W	-	77	38.247	Saccharomyces_cerevisiae
ENSAMXG00000009189	ddx54	97	61.196	ENSSBOG00000028194	DDX54	96	61.313	Saimiri_boliviensis_boliviensis
ENSAMXG00000009189	ddx54	95	60.979	ENSSHAG00000015646	DDX54	99	62.044	Sarcophilus_harrisii
ENSAMXG00000009189	ddx54	100	77.130	ENSSFOG00015014981	ddx54	100	77.130	Scleropages_formosus
ENSAMXG00000009189	ddx54	98	73.832	ENSSMAG00000003210	ddx54	100	74.197	Scophthalmus_maximus
ENSAMXG00000009189	ddx54	98	75.898	ENSSDUG00000004474	ddx54	100	76.109	Seriola_dumerili
ENSAMXG00000009189	ddx54	98	75.435	ENSSLDG00000010380	ddx54	100	75.427	Seriola_lalandi_dorsalis
ENSAMXG00000009189	ddx54	97	65.505	ENSSPUG00000014141	DDX54	95	65.505	Sphenodon_punctatus
ENSAMXG00000009189	ddx54	93	75.188	ENSSPAG00000022918	ddx54	97	75.643	Stegastes_partitus
ENSAMXG00000009189	ddx54	97	60.941	ENSSSCG00000009876	DDX54	96	61.412	Sus_scrofa
ENSAMXG00000009189	ddx54	93	65.556	ENSTGUG00000009126	DDX54	100	65.351	Taeniopygia_guttata
ENSAMXG00000009189	ddx54	100	74.943	ENSTRUG00000014939	ddx54	100	75.115	Takifugu_rubripes
ENSAMXG00000009189	ddx54	100	75.029	ENSTNIG00000009037	ddx54	100	74.740	Tetraodon_nigroviridis
ENSAMXG00000009189	ddx54	74	77.970	ENSTBEG00000003783	DDX54	77	77.970	Tupaia_belangeri
ENSAMXG00000009189	ddx54	97	58.167	ENSTTRG00000016678	DDX54	96	57.625	Tursiops_truncatus
ENSAMXG00000009189	ddx54	97	61.039	ENSUAMG00000028387	DDX54	99	61.481	Ursus_americanus
ENSAMXG00000009189	ddx54	81	77.805	ENSUMAG00000010245	DDX54	93	80.052	Ursus_maritimus
ENSAMXG00000009189	ddx54	97	61.085	ENSVVUG00000010212	DDX54	96	61.203	Vulpes_vulpes
ENSAMXG00000009189	ddx54	99	63.605	ENSXETG00000016410	ddx54	100	63.647	Xenopus_tropicalis
ENSAMXG00000009189	ddx54	100	75.496	ENSXCOG00000002909	ddx54	98	75.505	Xiphophorus_couchianus
ENSAMXG00000009189	ddx54	100	76.771	ENSXMAG00000005312	ddx54	98	76.568	Xiphophorus_maculatus