EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000009397 (Gene tree)
Gene ID: 103042636
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: probable RNA-binding protein 46
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5539 bases
Position: chr13:7777898-7783436
Accession: 103042636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009659	DND1_DSRM	PF14709.7	2.1e-22	1	1
ENSAMXP00000009659	RRM_1	PF00076.22	1.9e-37	1	3
ENSAMXP00000009659	RRM_1	PF00076.22	1.9e-37	2	3
ENSAMXP00000009659	RRM_1	PF00076.22	1.9e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009659	-	1320	XM_007258457	ENSAMXP00000009659	439 (aa)	XP_007258519	W5KPZ7

Gene Model

Click here to download ENSAMXG00000009397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000009397	rbm46	97	73.043	ENSAMXG00000020892	-	88	73.043
ENSAMXG00000009397	rbm46	67	54.027	ENSAMXG00000030806	syncripl	57	53.846
ENSAMXG00000009397	rbm46	98	55.096	ENSAMXG00000018180	a1cf	85	55.096

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000009397	rbm46	98	67.406	ENSG00000151962	RBM46	88	86.325	Homo_sapiens
ENSAMXG00000009397	rbm46	97	69.978	ENSAPOG00000009209	rbm46	89	70.199	Acanthochromis_polyacanthus
ENSAMXG00000009397	rbm46	98	67.627	ENSAMEG00000013290	RBM46	85	67.627	Ailuropoda_melanoleuca
ENSAMXG00000009397	rbm46	99	65.402	ENSACIG00000014500	rbm46	89	65.179	Amphilophus_citrinellus
ENSAMXG00000009397	rbm46	96	72.028	ENSAOCG00000001892	-	86	72.028	Amphiprion_ocellaris
ENSAMXG00000009397	rbm46	96	72.028	ENSAPEG00000017762	rbm46	96	72.028	Amphiprion_percula
ENSAMXG00000009397	rbm46	97	72.600	ENSATEG00000010775	rbm46	84	72.600	Anabas_testudineus
ENSAMXG00000009397	rbm46	97	66.368	ENSAPLG00000005116	RBM46	96	66.368	Anas_platyrhynchos
ENSAMXG00000009397	rbm46	98	67.574	ENSACAG00000015599	RBM46	84	67.574	Anolis_carolinensis
ENSAMXG00000009397	rbm46	98	66.519	ENSANAG00000029193	RBM46	96	66.519	Aotus_nancymaae
ENSAMXG00000009397	rbm46	97	68.653	ENSACLG00000016153	rbm46	81	68.874	Astatotilapia_calliptera
ENSAMXG00000009397	rbm46	98	67.627	ENSBTAG00000001696	RBM46	93	67.627	Bos_taurus
ENSAMXG00000009397	rbm46	98	66.519	ENSCJAG00000001768	RBM46	96	66.519	Callithrix_jacchus
ENSAMXG00000009397	rbm46	98	67.627	ENSCAFG00000008473	RBM46	93	67.627	Canis_familiaris
ENSAMXG00000009397	rbm46	98	67.627	ENSCAFG00020002468	RBM46	91	67.627	Canis_lupus_dingo
ENSAMXG00000009397	rbm46	98	67.406	ENSCHIG00000000502	RBM46	93	67.406	Capra_hircus
ENSAMXG00000009397	rbm46	98	67.406	ENSTSYG00000010435	RBM46	96	67.406	Carlito_syrichta
ENSAMXG00000009397	rbm46	98	66.075	ENSCAPG00000011928	-	93	66.075	Cavia_aperea
ENSAMXG00000009397	rbm46	77	70.588	ENSCAPG00000011841	-	95	70.506	Cavia_aperea
ENSAMXG00000009397	rbm46	98	63.576	ENSCPOG00000019272	-	84	63.636	Cavia_porcellus
ENSAMXG00000009397	rbm46	98	66.075	ENSCPOG00000010284	-	96	66.075	Cavia_porcellus
ENSAMXG00000009397	rbm46	98	68.736	ENSCPOG00000020396	-	90	68.736	Cavia_porcellus
ENSAMXG00000009397	rbm46	98	66.962	ENSCCAG00000027619	-	96	66.962	Cebus_capucinus
ENSAMXG00000009397	rbm46	98	55.432	ENSCCAG00000001323	-	94	55.432	Cebus_capucinus
ENSAMXG00000009397	rbm46	98	67.406	ENSCATG00000040148	RBM46	96	67.406	Cercocebus_atys
ENSAMXG00000009397	rbm46	98	66.297	ENSCLAG00000005846	-	96	66.297	Chinchilla_lanigera
ENSAMXG00000009397	rbm46	98	67.333	ENSCLAG00000011886	-	87	67.333	Chinchilla_lanigera
ENSAMXG00000009397	rbm46	98	67.406	ENSCSAG00000003263	RBM46	85	67.406	Chlorocebus_sabaeus
ENSAMXG00000009397	rbm46	98	67.111	ENSCHOG00000003429	RBM46	84	67.111	Choloepus_hoffmanni
ENSAMXG00000009397	rbm46	93	67.599	ENSCPBG00000009314	RBM46	94	67.599	Chrysemys_picta_bellii
ENSAMXG00000009397	rbm46	98	67.406	ENSCANG00000039065	RBM46	96	67.406	Colobus_angolensis_palliatus
ENSAMXG00000009397	rbm46	98	67.849	ENSCGRG00001016714	Rbm46	96	67.849	Cricetulus_griseus_chok1gshd
ENSAMXG00000009397	rbm46	98	67.849	ENSCGRG00000011738	Rbm46	96	67.849	Cricetulus_griseus_crigri
ENSAMXG00000009397	rbm46	98	60.407	ENSCSEG00000005530	rbm46	97	60.544	Cynoglossus_semilaevis
ENSAMXG00000009397	rbm46	99	66.295	ENSCVAG00000021013	rbm46	94	66.295	Cyprinodon_variegatus
ENSAMXG00000009397	rbm46	97	76.116	ENSDARG00000079452	rbm46	87	76.116	Danio_rerio
ENSAMXG00000009397	rbm46	98	67.406	ENSDNOG00000016195	RBM46	85	67.406	Dasypus_novemcinctus
ENSAMXG00000009397	rbm46	98	67.627	ENSDORG00000006405	Rbm46	96	67.627	Dipodomys_ordii
ENSAMXG00000009397	rbm46	98	66.741	ENSETEG00000014902	RBM46	85	66.741	Echinops_telfairi
ENSAMXG00000009397	rbm46	98	67.627	ENSEASG00005015821	RBM46	85	67.627	Equus_asinus_asinus
ENSAMXG00000009397	rbm46	98	67.627	ENSECAG00000007649	RBM46	93	67.627	Equus_caballus
ENSAMXG00000009397	rbm46	98	65.410	ENSEEUG00000011824	RBM46	85	65.410	Erinaceus_europaeus
ENSAMXG00000009397	rbm46	82	74.194	ENSELUG00000008166	rbm46	97	73.995	Esox_lucius
ENSAMXG00000009397	rbm46	98	67.627	ENSFCAG00000029812	RBM46	96	67.627	Felis_catus
ENSAMXG00000009397	rbm46	98	65.188	ENSFALG00000013157	RBM46	89	65.188	Ficedula_albicollis
ENSAMXG00000009397	rbm46	98	66.519	ENSFDAG00000006445	-	89	66.519	Fukomys_damarensis
ENSAMXG00000009397	rbm46	98	65.410	ENSFDAG00000019281	-	84	65.410	Fukomys_damarensis
ENSAMXG00000009397	rbm46	85	67.914	ENSFHEG00000013257	rbm46	87	67.914	Fundulus_heteroclitus
ENSAMXG00000009397	rbm46	98	61.333	ENSGALG00000009278	RBM46	95	61.333	Gallus_gallus
ENSAMXG00000009397	rbm46	73	76.708	ENSGAFG00000020245	rbm46	75	76.708	Gambusia_affinis
ENSAMXG00000009397	rbm46	98	67.627	ENSGAGG00000002019	RBM46	86	67.627	Gopherus_agassizii
ENSAMXG00000009397	rbm46	98	67.406	ENSGGOG00000001876	RBM46	96	67.406	Gorilla_gorilla
ENSAMXG00000009397	rbm46	97	67.681	ENSHBUG00000009609	rbm46	92	69.286	Haplochromis_burtoni
ENSAMXG00000009397	rbm46	93	66.118	ENSHGLG00000002463	-	96	67.229	Heterocephalus_glaber_female
ENSAMXG00000009397	rbm46	91	61.058	ENSHGLG00000010742	-	81	62.019	Heterocephalus_glaber_female
ENSAMXG00000009397	rbm46	98	58.945	ENSHGLG00000002940	-	85	58.945	Heterocephalus_glaber_female
ENSAMXG00000009397	rbm46	98	65.333	ENSHGLG00100012752	-	96	65.333	Heterocephalus_glaber_male
ENSAMXG00000009397	rbm46	91	61.058	ENSHGLG00100004977	-	81	62.019	Heterocephalus_glaber_male
ENSAMXG00000009397	rbm46	98	53.812	ENSHGLG00100018987	-	84	53.812	Heterocephalus_glaber_male
ENSAMXG00000009397	rbm46	96	52.927	ENSHCOG00000012998	rbm46	88	52.927	Hippocampus_comes
ENSAMXG00000009397	rbm46	95	76.159	ENSIPUG00000024038	rbm46	94	75.480	Ictalurus_punctatus
ENSAMXG00000009397	rbm46	98	67.849	ENSSTOG00000007918	RBM46	96	67.849	Ictidomys_tridecemlineatus
ENSAMXG00000009397	rbm46	98	67.627	ENSJJAG00000003902	Rbm46	96	67.627	Jaculus_jaculus
ENSAMXG00000009397	rbm46	97	72.600	ENSKMAG00000015127	rbm46	84	72.600	Kryptolebias_marmoratus
ENSAMXG00000009397	rbm46	98	67.550	ENSLACG00000002062	RBM46	84	67.550	Latimeria_chalumnae
ENSAMXG00000009397	rbm46	97	72.172	ENSLOCG00000008298	rbm46	95	72.172	Lepisosteus_oculatus
ENSAMXG00000009397	rbm46	98	67.406	ENSLAFG00000015448	RBM46	96	67.406	Loxodonta_africana
ENSAMXG00000009397	rbm46	98	67.406	ENSMFAG00000043485	RBM46	96	67.406	Macaca_fascicularis
ENSAMXG00000009397	rbm46	98	67.406	ENSMMUG00000021147	RBM46	93	67.406	Macaca_mulatta
ENSAMXG00000009397	rbm46	98	67.406	ENSMNEG00000002787	RBM46	96	67.406	Macaca_nemestrina
ENSAMXG00000009397	rbm46	98	67.406	ENSMLEG00000029756	RBM46	96	67.406	Mandrillus_leucophaeus
ENSAMXG00000009397	rbm46	97	71.882	ENSMAMG00000009093	rbm46	88	71.882	Mastacembelus_armatus
ENSAMXG00000009397	rbm46	97	70.481	ENSMZEG00005027849	rbm46	92	71.396	Maylandia_zebra
ENSAMXG00000009397	rbm46	98	61.333	ENSMGAG00000001457	RBM46	96	61.333	Meleagris_gallopavo
ENSAMXG00000009397	rbm46	98	67.849	ENSMAUG00000009911	Rbm46	96	67.849	Mesocricetus_auratus
ENSAMXG00000009397	rbm46	98	67.184	ENSMICG00000042747	RBM46	96	67.184	Microcebus_murinus
ENSAMXG00000009397	rbm46	98	67.849	ENSMOCG00000001188	Rbm46	96	67.849	Microtus_ochrogaster
ENSAMXG00000009397	rbm46	97	66.075	ENSMMOG00000011214	rbm46	86	66.075	Mola_mola
ENSAMXG00000009397	rbm46	98	67.849	ENSMODG00000001302	RBM46	77	67.849	Monodelphis_domestica
ENSAMXG00000009397	rbm46	96	65.909	ENSMALG00000006185	rbm46	94	65.909	Monopterus_albus
ENSAMXG00000009397	rbm46	98	67.849	MGP_CAROLIEiJ_G0025101	Rbm46	96	67.849	Mus_caroli
ENSAMXG00000009397	rbm46	98	68.071	ENSMUSG00000033882	Rbm46	96	68.071	Mus_musculus
ENSAMXG00000009397	rbm46	98	67.406	MGP_PahariEiJ_G0026544	Rbm46	96	67.406	Mus_pahari
ENSAMXG00000009397	rbm46	98	68.293	MGP_SPRETEiJ_G0026043	Rbm46	96	68.293	Mus_spretus
ENSAMXG00000009397	rbm46	98	67.627	ENSMPUG00000005670	RBM46	93	67.627	Mustela_putorius_furo
ENSAMXG00000009397	rbm46	98	67.035	ENSMLUG00000003221	RBM46	85	67.035	Myotis_lucifugus
ENSAMXG00000009397	rbm46	98	67.406	ENSNGAG00000004231	Rbm46	96	67.406	Nannospalax_galili
ENSAMXG00000009397	rbm46	97	71.897	ENSNBRG00000000273	rbm46	84	71.897	Neolamprologus_brichardi
ENSAMXG00000009397	rbm46	98	67.184	ENSNLEG00000006184	RBM46	96	67.184	Nomascus_leucogenys
ENSAMXG00000009397	rbm46	90	65.865	ENSMEUG00000013328	RBM46	100	65.865	Notamacropus_eugenii
ENSAMXG00000009397	rbm46	61	80.524	ENSOPRG00000007136	RBM46	94	81.648	Ochotona_princeps
ENSAMXG00000009397	rbm46	98	66.962	ENSODEG00000000735	-	96	66.962	Octodon_degus
ENSAMXG00000009397	rbm46	98	67.184	ENSODEG00000018002	-	88	66.962	Octodon_degus
ENSAMXG00000009397	rbm46	97	66.222	ENSONIG00000014096	rbm46	96	67.111	Oreochromis_niloticus
ENSAMXG00000009397	rbm46	98	66.814	ENSOANG00000002141	RBM46	93	66.814	Ornithorhynchus_anatinus
ENSAMXG00000009397	rbm46	98	67.627	ENSOCUG00000017859	RBM46	85	67.627	Oryctolagus_cuniculus
ENSAMXG00000009397	rbm46	99	67.808	ENSORLG00000002429	rbm46	89	69.626	Oryzias_latipes
ENSAMXG00000009397	rbm46	97	66.964	ENSORLG00020022154	rbm46	82	67.857	Oryzias_latipes_hni
ENSAMXG00000009397	rbm46	97	69.087	ENSORLG00015020234	rbm46	91	66.814	Oryzias_latipes_hsok
ENSAMXG00000009397	rbm46	96	63.901	ENSOMEG00000022580	rbm46	86	65.919	Oryzias_melastigma
ENSAMXG00000009397	rbm46	98	67.406	ENSOGAG00000005647	RBM46	85	67.406	Otolemur_garnettii
ENSAMXG00000009397	rbm46	98	67.627	ENSOARG00000016406	RBM46	93	67.627	Ovis_aries
ENSAMXG00000009397	rbm46	98	67.406	ENSPPAG00000043236	RBM46	96	67.406	Pan_paniscus
ENSAMXG00000009397	rbm46	98	67.627	ENSPPRG00000009416	RBM46	96	67.627	Panthera_pardus
ENSAMXG00000009397	rbm46	98	67.627	ENSPTIG00000017449	RBM46	96	67.627	Panthera_tigris_altaica
ENSAMXG00000009397	rbm46	98	67.406	ENSPTRG00000016538	RBM46	96	67.406	Pan_troglodytes
ENSAMXG00000009397	rbm46	98	67.406	ENSPANG00000004186	RBM46	96	67.406	Papio_anubis
ENSAMXG00000009397	rbm46	98	72.768	ENSPKIG00000015334	rbm46	79	72.768	Paramormyrops_kingsleyae
ENSAMXG00000009397	rbm46	98	67.627	ENSPSIG00000006429	RBM46	92	67.627	Pelodiscus_sinensis
ENSAMXG00000009397	rbm46	97	70.726	ENSPMGG00000019872	rbm46	93	70.726	Periophthalmus_magnuspinnatus
ENSAMXG00000009397	rbm46	98	67.849	ENSPEMG00000013899	Rbm46	96	67.849	Peromyscus_maniculatus_bairdii
ENSAMXG00000009397	rbm46	98	68.071	ENSPCIG00000029626	RBM46	93	68.071	Phascolarctos_cinereus
ENSAMXG00000009397	rbm46	96	76.380	ENSPFOG00000001079	rbm46	79	76.380	Poecilia_formosa
ENSAMXG00000009397	rbm46	97	70.721	ENSPLAG00000004541	rbm46	79	70.721	Poecilia_latipinna
ENSAMXG00000009397	rbm46	97	72.093	ENSPMEG00000015724	rbm46	91	72.093	Poecilia_mexicana
ENSAMXG00000009397	rbm46	97	70.721	ENSPREG00000014464	rbm46	94	70.439	Poecilia_reticulata
ENSAMXG00000009397	rbm46	98	67.333	ENSPPYG00000015144	RBM46	84	67.333	Pongo_abelii
ENSAMXG00000009397	rbm46	98	63.193	ENSPCAG00000003110	RBM46	84	63.193	Procavia_capensis
ENSAMXG00000009397	rbm46	98	66.741	ENSPCOG00000024347	RBM46	96	66.741	Propithecus_coquereli
ENSAMXG00000009397	rbm46	98	67.627	ENSPVAG00000008376	RBM46	85	67.627	Pteropus_vampyrus
ENSAMXG00000009397	rbm46	97	81.099	ENSPNAG00000025312	rbm46	87	81.099	Pygocentrus_nattereri
ENSAMXG00000009397	rbm46	98	67.849	ENSRNOG00000025823	Rbm46	85	67.849	Rattus_norvegicus
ENSAMXG00000009397	rbm46	98	66.962	ENSRBIG00000032583	RBM46	96	66.962	Rhinopithecus_bieti
ENSAMXG00000009397	rbm46	98	67.184	ENSRROG00000044288	RBM46	96	67.184	Rhinopithecus_roxellana
ENSAMXG00000009397	rbm46	98	66.741	ENSSBOG00000033028	RBM46	96	66.741	Saimiri_boliviensis_boliviensis
ENSAMXG00000009397	rbm46	98	67.849	ENSSHAG00000012596	RBM46	85	67.849	Sarcophilus_harrisii
ENSAMXG00000009397	rbm46	97	71.918	ENSSFOG00015000087	rbm46	85	72.500	Scleropages_formosus
ENSAMXG00000009397	rbm46	98	66.744	ENSSMAG00000017042	rbm46	94	66.744	Scophthalmus_maximus
ENSAMXG00000009397	rbm46	97	72.286	ENSSDUG00000020645	rbm46	87	72.286	Seriola_dumerili
ENSAMXG00000009397	rbm46	98	67.627	ENSSARG00000006520	RBM46	85	67.627	Sorex_araneus
ENSAMXG00000009397	rbm46	98	66.962	ENSSPUG00000004773	-	94	66.962	Sphenodon_punctatus
ENSAMXG00000009397	rbm46	98	66.962	ENSSPUG00000012525	-	84	66.962	Sphenodon_punctatus
ENSAMXG00000009397	rbm46	98	70.698	ENSSPAG00000013697	rbm46	94	70.698	Stegastes_partitus
ENSAMXG00000009397	rbm46	98	67.406	ENSSSCG00000008994	RBM46	93	67.406	Sus_scrofa
ENSAMXG00000009397	rbm46	98	64.523	ENSTGUG00000005307	RBM46	97	64.523	Taeniopygia_guttata
ENSAMXG00000009397	rbm46	99	67.347	ENSTRUG00000004237	rbm46	91	67.347	Takifugu_rubripes
ENSAMXG00000009397	rbm46	99	64.758	ENSTNIG00000008714	rbm46	86	64.758	Tetraodon_nigroviridis
ENSAMXG00000009397	rbm46	98	65.632	ENSTBEG00000013949	RBM46	85	65.632	Tupaia_belangeri
ENSAMXG00000009397	rbm46	98	67.406	ENSTTRG00000001239	RBM46	85	67.406	Tursiops_truncatus
ENSAMXG00000009397	rbm46	98	67.627	ENSUAMG00000026593	RBM46	93	67.627	Ursus_americanus
ENSAMXG00000009397	rbm46	98	67.627	ENSUMAG00000016442	RBM46	93	67.627	Ursus_maritimus
ENSAMXG00000009397	rbm46	98	67.627	ENSVVUG00000024957	RBM46	96	67.627	Vulpes_vulpes
ENSAMXG00000009397	rbm46	97	46.358	ENSXETG00000032344	-	84	46.358	Xenopus_tropicalis
ENSAMXG00000009397	rbm46	68	65.320	ENSXETG00000032067	-	80	67.003	Xenopus_tropicalis
ENSAMXG00000009397	rbm46	97	64.000	ENSXETG00000022412	-	83	64.000	Xenopus_tropicalis
ENSAMXG00000009397	rbm46	97	68.597	ENSXMAG00000008237	rbm46	90	68.597	Xiphophorus_maculatus