EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000009447 (Gene tree)
Gene ID
103026153
Gene Symbol
cnot3b
Alias
cnot3|wu:fi20g07|zgc:55934
Full Name
CCR4-NOT transcription complex subunit 3-like
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
27138 bases
Position
chrAPWO02000060.1:767152-794289
Accession
103026153
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000048628Not3PF04065.154.2e-9611
ENSAMXP00000009708Not3PF04065.157.7e-9611
ENSAMXP00000048628NOT2_3_5PF04153.181.6e-3911
ENSAMXP00000009708NOT2_3_5PF04153.182.5e-3911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000042502-2040-ENSAMXP00000048628679 (aa)--
ENSAMXT00000009708-4445XM_007258241ENSAMXP00000009708915 (aa)XP_007258303W5KQ46
Gene Model
Click here to download ENSAMXG00000009447's gene model file
Pathways
Pathway IDPathway NameSource
amex03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009447's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000009447cnot3b9593.373ENSAMXG00000012359cnot3a7389.730
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000009447cnot3b7088.770ENSG00000088038CNOT310095.361Homo_sapiens
ENSAMXG00000009447cnot3b6494.468ENSAPOG00000015499CNOT38294.643Acanthochromis_polyacanthus
ENSAMXG00000009447cnot3b9664.198ENSAPOG00000015002cnot3b9588.584Acanthochromis_polyacanthus
ENSAMXG00000009447cnot3b6791.776ENSAMEG00000004528CNOT38591.475Ailuropoda_melanoleuca
ENSAMXG00000009447cnot3b6892.411ENSACIG00000003652cnot3b9393.213Amphilophus_citrinellus
ENSAMXG00000009447cnot3b7892.857ENSACIG00000006635cnot3a9894.643Amphilophus_citrinellus
ENSAMXG00000009447cnot3b9493.548ENSAOCG00000018385-9877.889Amphiprion_ocellaris
ENSAMXG00000009447cnot3b6290.361ENSAOCG00000023769cnot3a9965.625Amphiprion_ocellaris
ENSAMXG00000009447cnot3b9493.548ENSAPEG00000002640cnot3b9288.584Amphiprion_percula
ENSAMXG00000009447cnot3b7090.811ENSAPEG00000006624cnot3a10067.701Amphiprion_percula
ENSAMXG00000009447cnot3b9690.270ENSATEG00000022737cnot3a10067.403Anabas_testudineus
ENSAMXG00000009447cnot3b9790.000ENSATEG00000015777cnot3b10071.067Anabas_testudineus
ENSAMXG00000009447cnot3b10063.859ENSACAG00000016085CNOT38992.105Anolis_carolinensis
ENSAMXG00000009447cnot3b7388.770ENSANAG00000025756CNOT38591.148Aotus_nancymaae
ENSAMXG00000009447cnot3b7091.351ENSACLG00000021136cnot3a10068.259Astatotilapia_calliptera
ENSAMXG00000009447cnot3b9888.710ENSACLG00000016702cnot3b10069.565Astatotilapia_calliptera
ENSAMXG00000009447cnot3b7288.770ENSBTAG00000014900CNOT38991.148Bos_taurus
ENSAMXG00000009447cnot3b7488.770ENSCJAG00000001094CNOT38591.148Callithrix_jacchus
ENSAMXG00000009447cnot3b8088.770ENSCAFG00000002699CNOT38591.148Canis_familiaris
ENSAMXG00000009447cnot3b8088.770ENSCAFG00020018359CNOT38591.148Canis_lupus_dingo
ENSAMXG00000009447cnot3b7288.770ENSCHIG00000015302CNOT38989.145Capra_hircus
ENSAMXG00000009447cnot3b7088.770ENSTSYG00000008058CNOT38591.148Carlito_syrichta
ENSAMXG00000009447cnot3b10060.789ENSCAPG00000009533CNOT38591.148Cavia_aperea
ENSAMXG00000009447cnot3b8279.837ENSCPOG00000020741CNOT38591.148Cavia_porcellus
ENSAMXG00000009447cnot3b7388.770ENSCCAG00000036290CNOT38591.148Cebus_capucinus
ENSAMXG00000009447cnot3b7088.770ENSCATG00000030324CNOT38591.148Cercocebus_atys
ENSAMXG00000009447cnot3b10061.162ENSCLAG00000003302CNOT310086.585Chinchilla_lanigera
ENSAMXG00000009447cnot3b7088.770ENSCSAG00000001900CNOT38591.148Chlorocebus_sabaeus
ENSAMXG00000009447cnot3b10061.962ENSCPBG00000011655CNOT38992.131Chrysemys_picta_bellii
ENSAMXG00000009447cnot3b10047.418ENSCING00000000293-6870.536Ciona_intestinalis
ENSAMXG00000009447cnot3b7188.770ENSCANG00000013408CNOT38591.148Colobus_angolensis_palliatus
ENSAMXG00000009447cnot3b8087.701ENSCGRG00001000855Cnot39090.820Cricetulus_griseus_chok1gshd
ENSAMXG00000009447cnot3b5469.767ENSCGRG00000012929Cnot37169.767Cricetulus_griseus_crigri
ENSAMXG00000009447cnot3b9789.714ENSCSEG00000016892cnot3b7391.018Cynoglossus_semilaevis
ENSAMXG00000009447cnot3b9991.351ENSCSEG00000003574cnot3a10067.330Cynoglossus_semilaevis
ENSAMXG00000009447cnot3b9590.323ENSCVAG00000022122cnot3b10067.444Cyprinodon_variegatus
ENSAMXG00000009447cnot3b7089.730ENSCVAG00000008168cnot3a10065.717Cyprinodon_variegatus
ENSAMXG00000009447cnot3b9894.054ENSDARG00000019842cnot3b10076.554Danio_rerio
ENSAMXG00000009447cnot3b9787.634ENSDARG00000007135cnot3a10067.660Danio_rerio
ENSAMXG00000009447cnot3b7088.770ENSDNOG00000045972CNOT38590.820Dasypus_novemcinctus
ENSAMXG00000009447cnot3b10061.930ENSDORG00000008021Cnot310081.609Dipodomys_ordii
ENSAMXG00000009447cnot3b56100.000ENSETEG00000006305CNOT364100.000Echinops_telfairi
ENSAMXG00000009447cnot3b6684.146ENSEBUG00000010437cnot3a8265.798Eptatretus_burgeri
ENSAMXG00000009447cnot3b7088.770ENSEASG00005021591CNOT38491.148Equus_asinus_asinus
ENSAMXG00000009447cnot3b7088.770ENSECAG00000023181CNOT38491.148Equus_caballus
ENSAMXG00000009447cnot3b9892.473ENSELUG00000000953cnot3b10072.046Esox_lucius
ENSAMXG00000009447cnot3b9594.578ENSELUG00000014743cnot3a10065.907Esox_lucius
ENSAMXG00000009447cnot3b8088.770ENSFCAG00000014042CNOT38591.148Felis_catus
ENSAMXG00000009447cnot3b9990.323ENSFHEG00000001696cnot3b10066.702Fundulus_heteroclitus
ENSAMXG00000009447cnot3b7090.040ENSFHEG00000023166cnot3a8795.089Fundulus_heteroclitus
ENSAMXG00000009447cnot3b8986.260ENSGMOG00000005365cnot3a9863.217Gadus_morhua
ENSAMXG00000009447cnot3b9790.860ENSGAFG00000003459cnot3b10068.042Gambusia_affinis
ENSAMXG00000009447cnot3b7089.730ENSGAFG00000013094cnot3a10066.000Gambusia_affinis
ENSAMXG00000009447cnot3b8985.714ENSGACG00000009395cnot3b8279.577Gasterosteus_aculeatus
ENSAMXG00000009447cnot3b6288.281ENSGACG00000011489cnot3a9861.564Gasterosteus_aculeatus
ENSAMXG00000009447cnot3b9961.517ENSGAGG00000012677CNOT38889.908Gopherus_agassizii
ENSAMXG00000009447cnot3b7088.770ENSGGOG00000012996CNOT38591.148Gorilla_gorilla
ENSAMXG00000009447cnot3b7091.351ENSHBUG00000005275cnot3a10068.365Haplochromis_burtoni
ENSAMXG00000009447cnot3b9789.247ENSHBUG00000019699cnot3b7689.785Haplochromis_burtoni
ENSAMXG00000009447cnot3b10059.921ENSHGLG00000008821CNOT310081.609Heterocephalus_glaber_female
ENSAMXG00000009447cnot3b6184.411ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSAMXG00000009447cnot3b9393.976ENSHCOG00000020968cnot3a9785.520Hippocampus_comes
ENSAMXG00000009447cnot3b9984.390ENSIPUG00000009046cnot3b10075.952Ictalurus_punctatus
ENSAMXG00000009447cnot3b9882.703ENSIPUG00000000167cnot38682.703Ictalurus_punctatus
ENSAMXG00000009447cnot3b10061.030ENSSTOG00000028248CNOT39091.148Ictidomys_tridecemlineatus
ENSAMXG00000009447cnot3b10059.432ENSJJAG00000014594Cnot310081.609Jaculus_jaculus
ENSAMXG00000009447cnot3b9989.189ENSKMAG00000004863cnot3a10070.902Kryptolebias_marmoratus
ENSAMXG00000009447cnot3b9991.398ENSKMAG00000018723cnot3b10068.877Kryptolebias_marmoratus
ENSAMXG00000009447cnot3b9292.208ENSLBEG00000018278cnot3b9970.342Labrus_bergylta
ENSAMXG00000009447cnot3b6391.429ENSLBEG00000017296cnot3a8290.391Labrus_bergylta
ENSAMXG00000009447cnot3b10060.969ENSLACG00000009742CNOT38891.148Latimeria_chalumnae
ENSAMXG00000009447cnot3b7797.605ENSLOCG00000000005cnot3b8697.605Lepisosteus_oculatus
ENSAMXG00000009447cnot3b9981.046ENSLAFG00000022133CNOT38590.523Loxodonta_africana
ENSAMXG00000009447cnot3b8088.770ENSMFAG00000040073CNOT38591.148Macaca_fascicularis
ENSAMXG00000009447cnot3b6293.277ENSMMUG00000009698CNOT310098.039Macaca_mulatta
ENSAMXG00000009447cnot3b6791.447ENSMNEG00000036750CNOT38591.148Macaca_nemestrina
ENSAMXG00000009447cnot3b6791.447ENSMLEG00000036579CNOT38491.148Mandrillus_leucophaeus
ENSAMXG00000009447cnot3b7091.351ENSMAMG00000019397cnot3a10067.869Mastacembelus_armatus
ENSAMXG00000009447cnot3b9794.086ENSMAMG00000019357cnot3b10072.689Mastacembelus_armatus
ENSAMXG00000009447cnot3b9888.710ENSMZEG00005002466cnot3b10070.457Maylandia_zebra
ENSAMXG00000009447cnot3b7091.351ENSMZEG00005016304cnot3a10068.259Maylandia_zebra
ENSAMXG00000009447cnot3b7987.701ENSMAUG00000014996Cnot38590.820Mesocricetus_auratus
ENSAMXG00000009447cnot3b7086.810ENSMICG00000002370CNOT38491.148Microcebus_murinus
ENSAMXG00000009447cnot3b9990.270ENSMMOG00000016446cnot3a10065.645Mola_mola
ENSAMXG00000009447cnot3b6988.430ENSMMOG00000013086cnot3b9891.071Mola_mola
ENSAMXG00000009447cnot3b7189.888ENSMODG00000004066CNOT37691.803Monodelphis_domestica
ENSAMXG00000009447cnot3b5688.851ENSMALG00000004936cnot3b7388.552Monopterus_albus
ENSAMXG00000009447cnot3b9691.351ENSMALG00000009204cnot3a10067.487Monopterus_albus
ENSAMXG00000009447cnot3b10058.984MGP_CAROLIEiJ_G0029095Cnot310096.000Mus_caroli
ENSAMXG00000009447cnot3b10058.540ENSMUSG00000035632Cnot310096.000Mus_musculus
ENSAMXG00000009447cnot3b10058.854MGP_PahariEiJ_G0020964Cnot310096.000Mus_pahari
ENSAMXG00000009447cnot3b10058.540MGP_SPRETEiJ_G0030148Cnot310096.000Mus_spretus
ENSAMXG00000009447cnot3b7288.770ENSMPUG00000010352CNOT38591.148Mustela_putorius_furo
ENSAMXG00000009447cnot3b7088.770ENSNGAG00000013266Cnot38691.148Nannospalax_galili
ENSAMXG00000009447cnot3b7989.247ENSNBRG00000003336cnot3b9088.426Neolamprologus_brichardi
ENSAMXG00000009447cnot3b6491.351ENSNBRG00000002401cnot3a10066.631Neolamprologus_brichardi
ENSAMXG00000009447cnot3b6794.578ENSNLEG00000006272CNOT38491.148Nomascus_leucogenys
ENSAMXG00000009447cnot3b87100.000ENSMEUG00000002952CNOT388100.000Notamacropus_eugenii
ENSAMXG00000009447cnot3b51100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSAMXG00000009447cnot3b10060.733ENSODEG00000000705CNOT310089.873Octodon_degus
ENSAMXG00000009447cnot3b7091.351ENSONIG00000006568cnot3a10068.008Oreochromis_niloticus
ENSAMXG00000009447cnot3b9893.011ENSONIG00000007047cnot3b10071.383Oreochromis_niloticus
ENSAMXG00000009447cnot3b10072.423ENSOCUG00000007691CNOT38591.148Oryctolagus_cuniculus
ENSAMXG00000009447cnot3b7090.909ENSORLG00000005982cnot3b10070.247Oryzias_latipes
ENSAMXG00000009447cnot3b7088.649ENSORLG00000011174cnot3a10065.895Oryzias_latipes
ENSAMXG00000009447cnot3b7088.649ENSORLG00020008009cnot3a10064.241Oryzias_latipes_hni
ENSAMXG00000009447cnot3b7090.909ENSORLG00020005779cnot3b10071.044Oryzias_latipes_hni
ENSAMXG00000009447cnot3b7088.649ENSORLG00015013729cnot3a10065.401Oryzias_latipes_hsok
ENSAMXG00000009447cnot3b7090.909ENSORLG00015019021cnot3b10070.588Oryzias_latipes_hsok
ENSAMXG00000009447cnot3b9790.909ENSOMEG00000015557cnot3b10069.272Oryzias_melastigma
ENSAMXG00000009447cnot3b8590.357ENSOMEG00000010309cnot3a8890.514Oryzias_melastigma
ENSAMXG00000009447cnot3b8088.770ENSOGAG00000006945CNOT38591.148Otolemur_garnettii
ENSAMXG00000009447cnot3b7088.770ENSPPAG00000002748CNOT38591.148Pan_paniscus
ENSAMXG00000009447cnot3b8088.770ENSPPRG00000011705CNOT38591.148Panthera_pardus
ENSAMXG00000009447cnot3b9188.770ENSPTIG00000008781CNOT39691.611Panthera_tigris_altaica
ENSAMXG00000009447cnot3b7088.770ENSPTRG00000046717-8591.148Pan_troglodytes
ENSAMXG00000009447cnot3b7088.770ENSPTRG00000011444CNOT38591.148Pan_troglodytes
ENSAMXG00000009447cnot3b7088.770ENSPANG00000009375CNOT38591.148Papio_anubis
ENSAMXG00000009447cnot3b9393.464ENSPKIG00000015967-9897.321Paramormyrops_kingsleyae
ENSAMXG00000009447cnot3b9691.892ENSPKIG00000011733CNOT310066.667Paramormyrops_kingsleyae
ENSAMXG00000009447cnot3b9584.456ENSPMGG00000022539cnot3b7786.631Periophthalmus_magnuspinnatus
ENSAMXG00000009447cnot3b7984.866ENSPEMG00000024185Cnot39090.820Peromyscus_maniculatus_bairdii
ENSAMXG00000009447cnot3b7189.888ENSPCIG00000023018CNOT39093.373Phascolarctos_cinereus
ENSAMXG00000009447cnot3b7988.830ENSPFOG00000008693cnot3a8885.484Poecilia_formosa
ENSAMXG00000009447cnot3b9790.323ENSPFOG00000007168cnot3b10067.364Poecilia_formosa
ENSAMXG00000009447cnot3b7089.730ENSPLAG00000013324cnot3a10066.453Poecilia_latipinna
ENSAMXG00000009447cnot3b9790.323ENSPLAG00000013457cnot3b10067.364Poecilia_latipinna
ENSAMXG00000009447cnot3b9790.860ENSPMEG00000010184cnot3b10067.469Poecilia_mexicana
ENSAMXG00000009447cnot3b7089.730ENSPMEG00000017718cnot3a10066.526Poecilia_mexicana
ENSAMXG00000009447cnot3b9982.450ENSPREG00000007592cnot3a9895.089Poecilia_reticulata
ENSAMXG00000009447cnot3b9589.785ENSPREG00000000662cnot3b9763.557Poecilia_reticulata
ENSAMXG00000009447cnot3b7088.770ENSPPYG00000010372CNOT38590.820Pongo_abelii
ENSAMXG00000009447cnot3b7094.068ENSPCAG00000011999CNOT35694.068Procavia_capensis
ENSAMXG00000009447cnot3b7388.770ENSPCOG00000017673CNOT38991.148Propithecus_coquereli
ENSAMXG00000009447cnot3b8087.701ENSPVAG00000015564CNOT39090.820Pteropus_vampyrus
ENSAMXG00000009447cnot3b7091.351ENSPNYG00000002282cnot3a10068.259Pundamilia_nyererei
ENSAMXG00000009447cnot3b9776.344ENSPNYG00000003358cnot3b9963.850Pundamilia_nyererei
ENSAMXG00000009447cnot3b10099.398ENSPNAG00000027459cnot3b10087.555Pygocentrus_nattereri
ENSAMXG00000009447cnot3b9592.169ENSPNAG00000017679cnot3a10063.541Pygocentrus_nattereri
ENSAMXG00000009447cnot3b10058.801ENSRNOG00000053234Cnot38590.820Rattus_norvegicus
ENSAMXG00000009447cnot3b8088.770ENSRBIG00000031025CNOT38591.148Rhinopithecus_bieti
ENSAMXG00000009447cnot3b8088.770ENSRROG00000003872CNOT38591.148Rhinopithecus_roxellana
ENSAMXG00000009447cnot3b10062.703ENSSBOG00000030268CNOT38591.148Saimiri_boliviensis_boliviensis
ENSAMXG00000009447cnot3b9792.432ENSSFOG00015019203-10069.075Scleropages_formosus
ENSAMXG00000009447cnot3b9594.595ENSSFOG00015000248cnot310070.860Scleropages_formosus
ENSAMXG00000009447cnot3b7090.811ENSSMAG00000013235cnot3a7490.811Scophthalmus_maximus
ENSAMXG00000009447cnot3b9790.526ENSSMAG00000016031cnot3b10070.251Scophthalmus_maximus
ENSAMXG00000009447cnot3b8194.872ENSSDUG00000008181cnot3a9895.089Seriola_dumerili
ENSAMXG00000009447cnot3b9793.548ENSSDUG00000003428cnot3b10074.262Seriola_dumerili
ENSAMXG00000009447cnot3b9793.548ENSSLDG00000014376cnot3b10074.156Seriola_lalandi_dorsalis
ENSAMXG00000009447cnot3b6588.889ENSSLDG00000014733cnot3a9966.052Seriola_lalandi_dorsalis
ENSAMXG00000009447cnot3b10063.885ENSSPUG00000008510CNOT38991.803Sphenodon_punctatus
ENSAMXG00000009447cnot3b8490.234ENSSPAG00000003858cnot3a8690.391Stegastes_partitus
ENSAMXG00000009447cnot3b9793.548ENSSPAG00000001429cnot3b10073.964Stegastes_partitus
ENSAMXG00000009447cnot3b7088.770ENSSSCG00000003264CNOT38491.148Sus_scrofa
ENSAMXG00000009447cnot3b7090.811ENSTRUG00000015732cnot3a10067.412Takifugu_rubripes
ENSAMXG00000009447cnot3b9888.832ENSTRUG00000007248cnot3b6789.785Takifugu_rubripes
ENSAMXG00000009447cnot3b8882.946ENSTNIG00000005663cnot3b10065.769Tetraodon_nigroviridis
ENSAMXG00000009447cnot3b9187.121ENSTNIG00000008082cnot3a10064.036Tetraodon_nigroviridis
ENSAMXG00000009447cnot3b5395.489ENSTBEG00000009620-5495.489Tupaia_belangeri
ENSAMXG00000009447cnot3b6791.776ENSUAMG00000005234CNOT38591.475Ursus_americanus
ENSAMXG00000009447cnot3b7294.872ENSUMAG00000010934CNOT310090.681Ursus_maritimus
ENSAMXG00000009447cnot3b8088.710ENSVVUG00000008239CNOT38491.148Vulpes_vulpes
ENSAMXG00000009447cnot3b10058.124ENSXETG00000003166cnot38889.644Xenopus_tropicalis
ENSAMXG00000009447cnot3b9389.610ENSXCOG00000018976cnot3b9964.488Xiphophorus_couchianus
ENSAMXG00000009447cnot3b9988.649ENSXCOG00000019460cnot3a9694.643Xiphophorus_couchianus
ENSAMXG00000009447cnot3b9791.398ENSXMAG00000014176cnot3b10068.114Xiphophorus_maculatus
ENSAMXG00000009447cnot3b9989.189ENSXMAG00000012273cnot3a10066.631Xiphophorus_maculatus

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