EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000009478 (Gene tree)
Gene ID: 103037972
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10613 bases
Position: chr13:2667788-2678400
Accession: 103037972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009750	U3_assoc_6	PF08640.11	2.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009750	-	1785	XM_007257102	ENSAMXP00000009750	594 (aa)	XP_007257164	W5KQ88

Gene Model

Click here to download ENSAMXG00000009478's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000009478	utp6	100	56.281	ENSG00000108651	UTP6	100	56.281	Homo_sapiens
ENSAMXG00000009478	utp6	100	73.277	ENSAPOG00000000435	utp6	100	73.277	Acanthochromis_polyacanthus
ENSAMXG00000009478	utp6	99	56.376	ENSAMEG00000005443	UTP6	99	56.376	Ailuropoda_melanoleuca
ENSAMXG00000009478	utp6	100	69.748	ENSACIG00000004124	utp6	100	69.748	Amphilophus_citrinellus
ENSAMXG00000009478	utp6	100	72.605	ENSAOCG00000016812	utp6	100	72.605	Amphiprion_ocellaris
ENSAMXG00000009478	utp6	100	72.941	ENSAPEG00000023565	utp6	100	72.941	Amphiprion_percula
ENSAMXG00000009478	utp6	100	71.765	ENSATEG00000003401	utp6	100	71.765	Anabas_testudineus
ENSAMXG00000009478	utp6	99	57.555	ENSAPLG00000005821	UTP6	99	57.555	Anas_platyrhynchos
ENSAMXG00000009478	utp6	100	60.804	ENSACAG00000009472	UTP6	100	60.804	Anolis_carolinensis
ENSAMXG00000009478	utp6	100	55.779	ENSANAG00000034603	UTP6	100	55.779	Aotus_nancymaae
ENSAMXG00000009478	utp6	100	72.773	ENSACLG00000006728	utp6	100	72.773	Astatotilapia_calliptera
ENSAMXG00000009478	utp6	100	53.010	ENSBTAG00000015612	UTP6	100	53.010	Bos_taurus
ENSAMXG00000009478	utp6	99	51.342	ENSBTAG00000003769	-	98	51.342	Bos_taurus
ENSAMXG00000009478	utp6	100	55.946	ENSCJAG00000014115	UTP6	100	55.946	Callithrix_jacchus
ENSAMXG00000009478	utp6	100	55.853	ENSCAFG00000018507	UTP6	100	55.853	Canis_familiaris
ENSAMXG00000009478	utp6	100	55.853	ENSCAFG00020014678	UTP6	100	55.853	Canis_lupus_dingo
ENSAMXG00000009478	utp6	100	53.344	ENSCHIG00000009726	-	100	53.344	Capra_hircus
ENSAMXG00000009478	utp6	100	53.344	ENSCHIG00000017954	-	100	53.344	Capra_hircus
ENSAMXG00000009478	utp6	99	51.089	ENSTSYG00000002202	UTP6	99	51.089	Carlito_syrichta
ENSAMXG00000009478	utp6	86	49.807	ENSCAPG00000017595	UTP6	93	49.807	Cavia_aperea
ENSAMXG00000009478	utp6	99	56.040	ENSCPOG00000014294	UTP6	100	56.040	Cavia_porcellus
ENSAMXG00000009478	utp6	100	52.261	ENSCCAG00000033318	-	100	52.261	Cebus_capucinus
ENSAMXG00000009478	utp6	100	55.686	ENSCATG00000034868	UTP6	100	55.686	Cercocebus_atys
ENSAMXG00000009478	utp6	99	56.376	ENSCLAG00000007274	UTP6	99	56.376	Chinchilla_lanigera
ENSAMXG00000009478	utp6	100	55.853	ENSCSAG00000006595	UTP6	100	55.853	Chlorocebus_sabaeus
ENSAMXG00000009478	utp6	87	44.853	ENSCHOG00000010940	-	87	44.853	Choloepus_hoffmanni
ENSAMXG00000009478	utp6	100	61.474	ENSCPBG00000004652	UTP6	100	61.474	Chrysemys_picta_bellii
ENSAMXG00000009478	utp6	99	30.542	ENSCING00000022947	-	99	30.542	Ciona_intestinalis
ENSAMXG00000009478	utp6	54	36.697	ENSCSAVG00000011416	-	99	36.697	Ciona_savignyi
ENSAMXG00000009478	utp6	87	41.065	ENSCANG00000031141	UTP6	89	41.065	Colobus_angolensis_palliatus
ENSAMXG00000009478	utp6	99	56.616	ENSCGRG00001000046	Utp6	100	56.616	Cricetulus_griseus_chok1gshd
ENSAMXG00000009478	utp6	95	56.007	ENSCGRG00000011543	Utp6	100	56.007	Cricetulus_griseus_crigri
ENSAMXG00000009478	utp6	100	64.657	ENSCSEG00000013422	utp6	100	73.770	Cynoglossus_semilaevis
ENSAMXG00000009478	utp6	100	71.597	ENSCVAG00000020322	utp6	100	71.597	Cyprinodon_variegatus
ENSAMXG00000009478	utp6	100	77.441	ENSDARG00000098433	utp6	100	83.978	Danio_rerio
ENSAMXG00000009478	utp6	100	56.689	ENSDNOG00000037018	UTP6	100	56.689	Dasypus_novemcinctus
ENSAMXG00000009478	utp6	95	53.805	ENSDORG00000003843	Utp6	99	56.985	Dipodomys_ordii
ENSAMXG00000009478	utp6	100	56.020	ENSEASG00005010870	UTP6	100	56.020	Equus_asinus_asinus
ENSAMXG00000009478	utp6	100	55.853	ENSECAG00000022217	UTP6	100	55.853	Equus_caballus
ENSAMXG00000009478	utp6	100	72.727	ENSELUG00000006618	utp6	100	72.727	Esox_lucius
ENSAMXG00000009478	utp6	100	55.092	ENSFCAG00000015795	UTP6	100	55.092	Felis_catus
ENSAMXG00000009478	utp6	100	59.799	ENSFALG00000002282	UTP6	100	59.799	Ficedula_albicollis
ENSAMXG00000009478	utp6	99	55.705	ENSFDAG00000019506	UTP6	100	55.705	Fukomys_damarensis
ENSAMXG00000009478	utp6	100	70.588	ENSFHEG00000010373	utp6	100	70.588	Fundulus_heteroclitus
ENSAMXG00000009478	utp6	100	67.899	ENSGMOG00000011958	utp6	100	67.899	Gadus_morhua
ENSAMXG00000009478	utp6	100	60.302	ENSGALG00000003260	UTP6	100	60.302	Gallus_gallus
ENSAMXG00000009478	utp6	100	72.437	ENSGAFG00000008505	utp6	100	72.437	Gambusia_affinis
ENSAMXG00000009478	utp6	100	71.092	ENSGACG00000019424	utp6	100	71.092	Gasterosteus_aculeatus
ENSAMXG00000009478	utp6	100	60.469	ENSGAGG00000004820	UTP6	100	60.469	Gopherus_agassizii
ENSAMXG00000009478	utp6	100	56.616	ENSGGOG00000013569	UTP6	100	56.616	Gorilla_gorilla
ENSAMXG00000009478	utp6	100	46.050	ENSGGOG00000026003	-	100	46.050	Gorilla_gorilla
ENSAMXG00000009478	utp6	100	72.773	ENSHBUG00000018668	utp6	100	72.773	Haplochromis_burtoni
ENSAMXG00000009478	utp6	99	52.027	ENSHGLG00000008642	-	99	52.027	Heterocephalus_glaber_female
ENSAMXG00000009478	utp6	99	55.872	ENSHGLG00000010332	UTP6	100	55.872	Heterocephalus_glaber_female
ENSAMXG00000009478	utp6	95	53.439	ENSHGLG00100006047	-	99	53.439	Heterocephalus_glaber_male
ENSAMXG00000009478	utp6	99	53.523	ENSHGLG00100014271	-	100	53.523	Heterocephalus_glaber_male
ENSAMXG00000009478	utp6	100	67.059	ENSHCOG00000017277	utp6	100	67.059	Hippocampus_comes
ENSAMXG00000009478	utp6	100	81.313	ENSIPUG00000022587	Utp6	100	81.313	Ictalurus_punctatus
ENSAMXG00000009478	utp6	99	56.449	ENSSTOG00000015875	UTP6	100	56.449	Ictidomys_tridecemlineatus
ENSAMXG00000009478	utp6	100	72.101	ENSKMAG00000021631	utp6	100	72.101	Kryptolebias_marmoratus
ENSAMXG00000009478	utp6	100	73.445	ENSLBEG00000002115	utp6	100	73.445	Labrus_bergylta
ENSAMXG00000009478	utp6	100	63.317	ENSLACG00000017158	UTP6	100	63.317	Latimeria_chalumnae
ENSAMXG00000009478	utp6	95	66.725	ENSLOCG00000013797	utp6	94	66.725	Lepisosteus_oculatus
ENSAMXG00000009478	utp6	100	55.686	ENSLAFG00000013008	UTP6	100	55.686	Loxodonta_africana
ENSAMXG00000009478	utp6	100	55.686	ENSMFAG00000038842	UTP6	100	55.686	Macaca_fascicularis
ENSAMXG00000009478	utp6	97	40.415	ENSMFAG00000041904	-	97	40.415	Macaca_fascicularis
ENSAMXG00000009478	utp6	100	55.686	ENSMMUG00000020403	UTP6	100	55.686	Macaca_mulatta
ENSAMXG00000009478	utp6	100	55.686	ENSMNEG00000039480	UTP6	100	55.686	Macaca_nemestrina
ENSAMXG00000009478	utp6	100	49.667	ENSMLEG00000032174	UTP6	100	49.667	Mandrillus_leucophaeus
ENSAMXG00000009478	utp6	99	43.655	ENSMLEG00000039364	-	99	43.655	Mandrillus_leucophaeus
ENSAMXG00000009478	utp6	100	71.429	ENSMAMG00000002228	utp6	99	71.429	Mastacembelus_armatus
ENSAMXG00000009478	utp6	100	72.773	ENSMZEG00005023895	utp6	100	72.773	Maylandia_zebra
ENSAMXG00000009478	utp6	95	59.155	ENSMGAG00000008111	UTP6	100	59.155	Meleagris_gallopavo
ENSAMXG00000009478	utp6	99	56.449	ENSMAUG00000021895	Utp6	100	56.449	Mesocricetus_auratus
ENSAMXG00000009478	utp6	100	55.017	ENSMICG00000002632	UTP6	100	55.017	Microcebus_murinus
ENSAMXG00000009478	utp6	99	55.276	ENSMOCG00000014163	Utp6	100	55.276	Microtus_ochrogaster
ENSAMXG00000009478	utp6	100	68.571	ENSMMOG00000008653	utp6	100	68.571	Mola_mola
ENSAMXG00000009478	utp6	100	59.532	ENSMODG00000019206	UTP6	100	59.532	Monodelphis_domestica
ENSAMXG00000009478	utp6	100	71.597	ENSMALG00000021112	utp6	100	71.597	Monopterus_albus
ENSAMXG00000009478	utp6	99	56.449	MGP_CAROLIEiJ_G0016828	Utp6	100	56.449	Mus_caroli
ENSAMXG00000009478	utp6	99	56.449	ENSMUSG00000035575	Utp6	100	56.449	Mus_musculus
ENSAMXG00000009478	utp6	99	52.421	MGP_PahariEiJ_G0017965	Utp6	100	52.421	Mus_pahari
ENSAMXG00000009478	utp6	99	56.281	MGP_SPRETEiJ_G0017672	Utp6	100	56.281	Mus_spretus
ENSAMXG00000009478	utp6	100	54.606	ENSMPUG00000014581	UTP6	100	54.606	Mustela_putorius_furo
ENSAMXG00000009478	utp6	100	56.020	ENSMLUG00000016422	UTP6	100	56.020	Myotis_lucifugus
ENSAMXG00000009478	utp6	99	55.946	ENSNGAG00000015482	Utp6	100	55.946	Nannospalax_galili
ENSAMXG00000009478	utp6	100	72.941	ENSNBRG00000019714	utp6	100	72.941	Neolamprologus_brichardi
ENSAMXG00000009478	utp6	100	55.109	ENSNLEG00000011009	UTP6	100	55.109	Nomascus_leucogenys
ENSAMXG00000009478	utp6	88	52.482	ENSOPRG00000008446	-	89	52.482	Ochotona_princeps
ENSAMXG00000009478	utp6	66	58.228	ENSODEG00000011971	UTP6	99	58.228	Octodon_degus
ENSAMXG00000009478	utp6	100	72.437	ENSONIG00000018090	utp6	100	72.437	Oreochromis_niloticus
ENSAMXG00000009478	utp6	96	57.840	ENSOANG00000004279	UTP6	97	57.840	Ornithorhynchus_anatinus
ENSAMXG00000009478	utp6	99	54.941	ENSOCUG00000016980	UTP6	99	54.941	Oryctolagus_cuniculus
ENSAMXG00000009478	utp6	99	71.044	ENSORLG00000003546	utp6	64	71.044	Oryzias_latipes
ENSAMXG00000009478	utp6	99	71.044	ENSORLG00020010377	utp6	99	71.044	Oryzias_latipes_hni
ENSAMXG00000009478	utp6	99	70.707	ENSORLG00015008893	utp6	99	70.707	Oryzias_latipes_hsok
ENSAMXG00000009478	utp6	100	70.588	ENSOMEG00000017487	utp6	100	70.588	Oryzias_melastigma
ENSAMXG00000009478	utp6	87	48.956	ENSOGAG00000004511	UTP6	100	49.143	Otolemur_garnettii
ENSAMXG00000009478	utp6	100	53.512	ENSOARG00000013474	UTP6	100	53.512	Ovis_aries
ENSAMXG00000009478	utp6	100	46.218	ENSPPAG00000016895	-	100	46.218	Pan_paniscus
ENSAMXG00000009478	utp6	100	56.449	ENSPPAG00000038089	UTP6	100	56.449	Pan_paniscus
ENSAMXG00000009478	utp6	100	56.856	ENSPPRG00000001010	UTP6	100	56.856	Panthera_pardus
ENSAMXG00000009478	utp6	100	56.856	ENSPTIG00000013913	UTP6	100	56.856	Panthera_tigris_altaica
ENSAMXG00000009478	utp6	100	46.218	ENSPTRG00000044798	-	100	46.218	Pan_troglodytes
ENSAMXG00000009478	utp6	100	56.449	ENSPTRG00000008977	UTP6	100	56.449	Pan_troglodytes
ENSAMXG00000009478	utp6	100	53.422	ENSPANG00000023113	UTP6	100	53.422	Papio_anubis
ENSAMXG00000009478	utp6	99	43.316	ENSPANG00000034274	-	99	43.316	Papio_anubis
ENSAMXG00000009478	utp6	100	73.579	ENSPKIG00000004653	utp6	100	73.579	Paramormyrops_kingsleyae
ENSAMXG00000009478	utp6	100	60.336	ENSPSIG00000012435	UTP6	100	60.336	Pelodiscus_sinensis
ENSAMXG00000009478	utp6	100	71.092	ENSPMGG00000009548	utp6	100	71.092	Periophthalmus_magnuspinnatus
ENSAMXG00000009478	utp6	99	55.779	ENSPEMG00000014081	Utp6	100	55.779	Peromyscus_maniculatus_bairdii
ENSAMXG00000009478	utp6	93	46.195	ENSPMAG00000009561	utp6	100	46.195	Petromyzon_marinus
ENSAMXG00000009478	utp6	100	60.972	ENSPCIG00000029968	UTP6	86	60.972	Phascolarctos_cinereus
ENSAMXG00000009478	utp6	100	72.773	ENSPFOG00000013918	utp6	100	72.773	Poecilia_formosa
ENSAMXG00000009478	utp6	100	72.437	ENSPLAG00000017825	utp6	100	72.437	Poecilia_latipinna
ENSAMXG00000009478	utp6	100	72.941	ENSPMEG00000008133	utp6	100	72.941	Poecilia_mexicana
ENSAMXG00000009478	utp6	100	70.420	ENSPREG00000013108	utp6	99	70.420	Poecilia_reticulata
ENSAMXG00000009478	utp6	100	53.601	ENSPPYG00000008154	UTP6	100	53.601	Pongo_abelii
ENSAMXG00000009478	utp6	100	54.849	ENSPCOG00000010224	UTP6	100	54.849	Propithecus_coquereli
ENSAMXG00000009478	utp6	100	52.508	ENSPVAG00000015759	UTP6	100	52.508	Pteropus_vampyrus
ENSAMXG00000009478	utp6	100	72.437	ENSPNYG00000002290	utp6	100	72.437	Pundamilia_nyererei
ENSAMXG00000009478	utp6	100	84.175	ENSPNAG00000027370	utp6	100	84.175	Pygocentrus_nattereri
ENSAMXG00000009478	utp6	99	55.109	ENSRNOG00000014209	Utp6	100	55.109	Rattus_norvegicus
ENSAMXG00000009478	utp6	100	55.518	ENSRBIG00000020822	UTP6	100	55.518	Rhinopithecus_bieti
ENSAMXG00000009478	utp6	100	55.518	ENSRROG00000036838	UTP6	100	55.518	Rhinopithecus_roxellana
ENSAMXG00000009478	utp6	100	71.070	ENSSFOG00015005978	utp6	100	71.070	Scleropages_formosus
ENSAMXG00000009478	utp6	100	71.933	ENSSMAG00000014772	utp6	100	71.933	Scophthalmus_maximus
ENSAMXG00000009478	utp6	100	72.941	ENSSDUG00000000329	utp6	100	72.941	Seriola_dumerili
ENSAMXG00000009478	utp6	100	71.933	ENSSLDG00000016724	utp6	100	71.933	Seriola_lalandi_dorsalis
ENSAMXG00000009478	utp6	99	49.497	ENSSARG00000010778	UTP6	99	49.497	Sorex_araneus
ENSAMXG00000009478	utp6	100	60.134	ENSSPUG00000005273	UTP6	100	60.134	Sphenodon_punctatus
ENSAMXG00000009478	utp6	100	71.933	ENSSPAG00000011871	utp6	99	71.933	Stegastes_partitus
ENSAMXG00000009478	utp6	100	56.522	ENSSSCG00000017745	UTP6	100	56.522	Sus_scrofa
ENSAMXG00000009478	utp6	100	58.794	ENSTGUG00000004999	UTP6	100	58.794	Taeniopygia_guttata
ENSAMXG00000009478	utp6	99	68.855	ENSTRUG00000012005	utp6	100	68.855	Takifugu_rubripes
ENSAMXG00000009478	utp6	99	69.192	ENSTNIG00000003235	utp6	100	69.192	Tetraodon_nigroviridis
ENSAMXG00000009478	utp6	68	54.144	ENSTBEG00000005388	-	67	54.144	Tupaia_belangeri
ENSAMXG00000009478	utp6	100	55.184	ENSTTRG00000009911	UTP6	100	55.184	Tursiops_truncatus
ENSAMXG00000009478	utp6	99	56.208	ENSUMAG00000015139	UTP6	99	56.208	Ursus_maritimus
ENSAMXG00000009478	utp6	100	56.187	ENSVPAG00000005782	UTP6	100	56.187	Vicugna_pacos
ENSAMXG00000009478	utp6	100	56.020	ENSVVUG00000012238	UTP6	100	56.020	Vulpes_vulpes
ENSAMXG00000009478	utp6	100	50.586	ENSXETG00000020057	utp6	100	50.586	Xenopus_tropicalis
ENSAMXG00000009478	utp6	100	72.194	ENSXCOG00000013626	utp6	100	81.944	Xiphophorus_couchianus
ENSAMXG00000009478	utp6	100	72.269	ENSXMAG00000017414	utp6	100	72.269	Xiphophorus_maculatus