EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000009497 (Gene tree)
Gene ID: 103040137
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 53131 bases
Position: chr2:14710822-14763952
Accession: 103040137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000009797	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000009797	-	11204	XM_022674232	ENSAMXP00000009797	2267 (aa)	XP_022529953	W5KQD5

Gene Model

Click here to download ENSAMXG00000009497's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000009497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000009497	setd1a	70	84.797	ENSACIG00000007144	setd1a	88	80.247	Amphilophus_citrinellus
ENSAMXG00000009497	setd1a	60	80.456	ENSACAG00000007606	-	58	80.000	Anolis_carolinensis
ENSAMXG00000009497	setd1a	100	59.647	ENSCVAG00000011672	setd1a	59	59.824	Cyprinodon_variegatus
ENSAMXG00000009497	setd1a	100	71.275	ENSDARG00000060030	setd1a	100	71.367	Danio_rerio
ENSAMXG00000009497	setd1a	95	61.532	ENSELUG00000020261	setd1a	59	74.157	Esox_lucius
ENSAMXG00000009497	setd1a	100	55.787	ENSFHEG00000023258	setd1a	59	83.607	Fundulus_heteroclitus
ENSAMXG00000009497	setd1a	58	84.718	ENSGAFG00000011698	setd1a	75	89.796	Gambusia_affinis
ENSAMXG00000009497	setd1a	74	75.338	ENSGACG00000013688	setd1a	79	78.063	Gasterosteus_aculeatus
ENSAMXG00000009497	setd1a	70	75.207	ENSHCOG00000003119	setd1a	86	80.363	Hippocampus_comes
ENSAMXG00000009497	setd1a	100	71.192	ENSIPUG00000007413	setd1a	100	71.329	Ictalurus_punctatus
ENSAMXG00000009497	setd1a	69	81.961	ENSMAMG00000021851	setd1a	89	81.961	Mastacembelus_armatus
ENSAMXG00000009497	setd1a	67	77.748	ENSMMOG00000016992	setd1a	87	83.384	Mola_mola
ENSAMXG00000009497	setd1a	70	59.179	ENSORLG00000002213	setd1a	58	57.982	Oryzias_latipes
ENSAMXG00000009497	setd1a	70	59.082	ENSORLG00020011897	setd1a	58	58.026	Oryzias_latipes_hni
ENSAMXG00000009497	setd1a	70	59.402	ENSORLG00015004826	setd1a	58	58.189	Oryzias_latipes_hsok
ENSAMXG00000009497	setd1a	100	84.197	ENSPNAG00000019165	setd1a	100	84.458	Pygocentrus_nattereri
ENSAMXG00000009497	setd1a	71	89.583	ENSTNIG00000014930	setd1a	71	75.415	Tetraodon_nigroviridis
ENSAMXG00000009497	setd1a	58	67.640	ENSXCOG00000017585	setd1a	59	68.233	Xiphophorus_couchianus