EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000010030 (Gene tree)
Gene ID: 103028156
Gene Symbol: setdb1a
Alias: fc07d03|si:ch211-81a5.6|wu:fc07d03
Full Name: histone-lysine N-methyltransferase SETDB1-A-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 18954 bases
Position: chr23:9381558-9400511
Accession: 103028156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010304	MBD	PF01429.19	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010304	-	5666	XM_022683004	ENSAMXP00000010304	1657 (aa)	XP_022538725	W5KRU2

Gene Model

Click here to download ENSAMXG00000010030's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010030	setdb1a	67	66.165	ENSG00000143379	SETDB1	84	44.444	Homo_sapiens
ENSAMXG00000010030	setdb1a	64	57.407	ENSAPOG00000016228	setdb1b	79	47.273	Acanthochromis_polyacanthus
ENSAMXG00000010030	setdb1a	55	64.539	ENSAPLG00000013908	SETDB1	51	64.539	Anas_platyrhynchos
ENSAMXG00000010030	setdb1a	68	66.165	ENSANAG00000001819	SETDB1	56	66.165	Aotus_nancymaae
ENSAMXG00000010030	setdb1a	55	60.000	ENSACLG00000020489	setdb1b	65	46.960	Astatotilapia_calliptera
ENSAMXG00000010030	setdb1a	69	58.491	ENSBTAG00000000098	SETDB1	55	58.491	Bos_taurus
ENSAMXG00000010030	setdb1a	68	66.165	ENSCJAG00000006972	SETDB1	55	57.764	Callithrix_jacchus
ENSAMXG00000010030	setdb1a	59	66.165	ENSCAFG00000023501	SETDB1	74	59.748	Canis_familiaris
ENSAMXG00000010030	setdb1a	65	66.165	ENSCAFG00020013596	SETDB1	61	59.748	Canis_lupus_dingo
ENSAMXG00000010030	setdb1a	70	58.491	ENSCHIG00000010698	SETDB1	57	58.491	Capra_hircus
ENSAMXG00000010030	setdb1a	60	38.808	ENSTSYG00000012646	SETDB1	55	46.105	Carlito_syrichta
ENSAMXG00000010030	setdb1a	67	66.165	ENSCPOG00000001632	SETDB1	55	62.069	Cavia_porcellus
ENSAMXG00000010030	setdb1a	68	66.165	ENSCCAG00000024882	SETDB1	54	66.165	Cebus_capucinus
ENSAMXG00000010030	setdb1a	67	66.165	ENSCATG00000044888	SETDB1	70	66.165	Cercocebus_atys
ENSAMXG00000010030	setdb1a	59	58.385	ENSCSAG00000018034	SETDB1	52	58.385	Chlorocebus_sabaeus
ENSAMXG00000010030	setdb1a	64	66.165	ENSCHOG00000004013	SETDB1	50	66.165	Choloepus_hoffmanni
ENSAMXG00000010030	setdb1a	57	63.380	ENSCPBG00000008716	SETDB1	51	63.380	Chrysemys_picta_bellii
ENSAMXG00000010030	setdb1a	59	58.385	ENSCANG00000036388	SETDB1	77	58.385	Colobus_angolensis_palliatus
ENSAMXG00000010030	setdb1a	60	66.165	ENSCGRG00001010822	Setdb1	55	66.165	Cricetulus_griseus_chok1gshd
ENSAMXG00000010030	setdb1a	60	66.165	ENSCGRG00000005953	Setdb1	55	66.165	Cricetulus_griseus_crigri
ENSAMXG00000010030	setdb1a	57	58.025	ENSCSEG00000002988	setdb1b	65	46.605	Cynoglossus_semilaevis
ENSAMXG00000010030	setdb1a	57	63.121	ENSDARG00000099021	setdb1b	63	47.846	Danio_rerio
ENSAMXG00000010030	setdb1a	78	53.416	ENSDARG00000041243	setdb1a	71	53.416	Danio_rerio
ENSAMXG00000010030	setdb1a	67	66.165	ENSDORG00000006830	Setdb1	72	62.069	Dipodomys_ordii
ENSAMXG00000010030	setdb1a	67	66.165	ENSEASG00005002061	SETDB1	53	66.165	Equus_asinus_asinus
ENSAMXG00000010030	setdb1a	67	66.165	ENSECAG00000023954	SETDB1	53	66.165	Equus_caballus
ENSAMXG00000010030	setdb1a	63	48.864	ENSELUG00000006204	-	84	48.899	Esox_lucius
ENSAMXG00000010030	setdb1a	67	66.165	ENSFCAG00000009655	SETDB1	55	59.748	Felis_catus
ENSAMXG00000010030	setdb1a	69	57.764	ENSFDAG00000021515	SETDB1	57	57.764	Fukomys_damarensis
ENSAMXG00000010030	setdb1a	56	60.000	ENSGAGG00000005348	SETDB1	53	60.000	Gopherus_agassizii
ENSAMXG00000010030	setdb1a	67	66.165	ENSGGOG00000016308	SETDB1	55	66.165	Gorilla_gorilla
ENSAMXG00000010030	setdb1a	55	60.000	ENSHBUG00000004618	setdb1b	80	47.328	Haplochromis_burtoni
ENSAMXG00000010030	setdb1a	67	57.764	ENSHGLG00000011098	SETDB1	56	57.764	Heterocephalus_glaber_female
ENSAMXG00000010030	setdb1a	67	57.764	ENSHGLG00100009789	SETDB1	56	57.764	Heterocephalus_glaber_male
ENSAMXG00000010030	setdb1a	54	64.409	ENSIPUG00000007923	setdb1a	60	66.265	Ictalurus_punctatus
ENSAMXG00000010030	setdb1a	63	42.857	ENSIPUG00000004536	setdb1	71	43.367	Ictalurus_punctatus
ENSAMXG00000010030	setdb1a	51	58.642	ENSLBEG00000025862	setdb1b	64	47.481	Labrus_bergylta
ENSAMXG00000010030	setdb1a	58	61.972	ENSLACG00000011159	SETDB1	70	61.972	Latimeria_chalumnae
ENSAMXG00000010030	setdb1a	69	58.491	ENSLAFG00000004006	SETDB1	56	58.491	Loxodonta_africana
ENSAMXG00000010030	setdb1a	67	66.165	ENSMFAG00000042328	SETDB1	56	57.764	Macaca_fascicularis
ENSAMXG00000010030	setdb1a	67	66.165	ENSMMUG00000023235	SETDB1	55	66.165	Macaca_mulatta
ENSAMXG00000010030	setdb1a	60	66.165	ENSMNEG00000017223	SETDB1	54	66.165	Macaca_nemestrina
ENSAMXG00000010030	setdb1a	67	66.165	ENSMLEG00000033050	SETDB1	56	57.764	Mandrillus_leucophaeus
ENSAMXG00000010030	setdb1a	55	60.000	ENSMZEG00005016099	setdb1b	65	46.960	Maylandia_zebra
ENSAMXG00000010030	setdb1a	51	62.069	ENSMAUG00000021391	Setdb1	59	62.069	Mesocricetus_auratus
ENSAMXG00000010030	setdb1a	69	58.491	ENSMICG00000000425	SETDB1	73	58.491	Microcebus_murinus
ENSAMXG00000010030	setdb1a	58	57.407	ENSMMOG00000016162	setdb1b	65	48.308	Mola_mola
ENSAMXG00000010030	setdb1a	61	66.165	MGP_CAROLIEiJ_G0025342	Setdb1	69	66.165	Mus_caroli
ENSAMXG00000010030	setdb1a	60	66.165	ENSMUSG00000015697	Setdb1	69	66.165	Mus_musculus
ENSAMXG00000010030	setdb1a	67	66.165	ENSNGAG00000020151	Setdb1	58	66.165	Nannospalax_galili
ENSAMXG00000010030	setdb1a	67	59.589	ENSNLEG00000009996	SETDB1	55	59.589	Nomascus_leucogenys
ENSAMXG00000010030	setdb1a	60	66.165	ENSMEUG00000006544	-	70	66.165	Notamacropus_eugenii
ENSAMXG00000010030	setdb1a	65	58.511	ENSOPRG00000015349	SETDB1	53	58.511	Ochotona_princeps
ENSAMXG00000010030	setdb1a	69	57.764	ENSODEG00000012471	SETDB1	57	57.764	Octodon_degus
ENSAMXG00000010030	setdb1a	55	60.000	ENSONIG00000006454	setdb1b	64	47.248	Oreochromis_niloticus
ENSAMXG00000010030	setdb1a	67	66.165	ENSOCUG00000003642	SETDB1	54	62.069	Oryctolagus_cuniculus
ENSAMXG00000010030	setdb1a	70	58.491	ENSOARG00000020880	SETDB1	56	58.491	Ovis_aries
ENSAMXG00000010030	setdb1a	67	66.165	ENSPPAG00000041015	SETDB1	55	66.165	Pan_paniscus
ENSAMXG00000010030	setdb1a	67	66.165	ENSPTRG00000001267	SETDB1	57	57.764	Pan_troglodytes
ENSAMXG00000010030	setdb1a	60	50.962	ENSPKIG00000010963	setdb1b	64	45.982	Paramormyrops_kingsleyae
ENSAMXG00000010030	setdb1a	58	51.961	ENSPFOG00000004429	setdb1b	63	47.846	Poecilia_formosa
ENSAMXG00000010030	setdb1a	63	62.759	ENSPLAG00000019076	-	80	47.130	Poecilia_latipinna
ENSAMXG00000010030	setdb1a	61	54.206	ENSPLAG00000017117	setdb1b	79	46.429	Poecilia_latipinna
ENSAMXG00000010030	setdb1a	67	66.165	ENSPPYG00000000887	SETDB1	55	66.165	Pongo_abelii
ENSAMXG00000010030	setdb1a	68	66.165	ENSPCOG00000027869	SETDB1	54	66.165	Propithecus_coquereli
ENSAMXG00000010030	setdb1a	69	47.799	ENSPVAG00000004355	SETDB1	55	47.799	Pteropus_vampyrus
ENSAMXG00000010030	setdb1a	55	60.000	ENSPNYG00000003997	setdb1b	80	47.685	Pundamilia_nyererei
ENSAMXG00000010030	setdb1a	84	68.994	ENSPNAG00000003444	setdb1a	99	55.041	Pygocentrus_nattereri
ENSAMXG00000010030	setdb1a	57	48.080	ENSPNAG00000021617	setdb1b	85	47.214	Pygocentrus_nattereri
ENSAMXG00000010030	setdb1a	60	66.165	ENSRNOG00000021143	Setdb1	68	66.165	Rattus_norvegicus
ENSAMXG00000010030	setdb1a	67	66.165	ENSRBIG00000042359	SETDB1	57	57.764	Rhinopithecus_bieti
ENSAMXG00000010030	setdb1a	67	66.165	ENSRROG00000032628	SETDB1	57	57.764	Rhinopithecus_roxellana
ENSAMXG00000010030	setdb1a	70	66.165	ENSSBOG00000028608	SETDB1	58	57.764	Saimiri_boliviensis_boliviensis
ENSAMXG00000010030	setdb1a	68	57.764	ENSSHAG00000012701	SETDB1	71	57.764	Sarcophilus_harrisii
ENSAMXG00000010030	setdb1a	54	58.025	ENSSDUG00000007513	setdb1b	80	47.727	Seriola_dumerili
ENSAMXG00000010030	setdb1a	54	58.025	ENSSLDG00000015209	setdb1b	79	47.727	Seriola_lalandi_dorsalis
ENSAMXG00000010030	setdb1a	61	67.669	ENSSPUG00000002969	SETDB1	51	67.669	Sphenodon_punctatus
ENSAMXG00000010030	setdb1a	68	66.165	ENSSSCG00000006645	SETDB1	57	66.165	Sus_scrofa
ENSAMXG00000010030	setdb1a	57	82.474	ENSTRUG00000014641	setdb1b	68	47.222	Takifugu_rubripes
ENSAMXG00000010030	setdb1a	58	58.491	ENSTTRG00000006966	SETDB1	54	58.491	Tursiops_truncatus
ENSAMXG00000010030	setdb1a	67	66.165	ENSVVUG00000011637	SETDB1	72	59.748	Vulpes_vulpes
ENSAMXG00000010030	setdb1a	62	68.657	ENSXETG00000008936	setdb1	50	68.657	Xenopus_tropicalis
ENSAMXG00000010030	setdb1a	56	56.044	ENSXCOG00000019497	setdb1b	52	56.044	Xiphophorus_couchianus