EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000010155 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8426 bases
Position: chr20:11324954-11333379
Accession: 103023833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010479	Nucleoplasmin	PF03066.15	1.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010479	-	780	XM_022681054	ENSAMXP00000010479	259 (aa)	XP_022536775	W5KSB7

Gene Model

Click here to download ENSAMXG00000010155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010155	npm1a	99	60.884	ENSAPOG00000002813	npm1a	98	58.503	Acanthochromis_polyacanthus
ENSAMXG00000010155	npm1a	94	54.380	ENSACIG00000014201	npm1a	100	52.941	Amphilophus_citrinellus
ENSAMXG00000010155	npm1a	88	61.864	ENSAOCG00000004978	npm1a	100	58.898	Amphiprion_ocellaris
ENSAMXG00000010155	npm1a	99	59.727	ENSAPEG00000008594	npm1a	98	57.338	Amphiprion_percula
ENSAMXG00000010155	npm1a	98	59.272	ENSATEG00000008885	npm1a	98	56.954	Anabas_testudineus
ENSAMXG00000010155	npm1a	95	54.475	ENSACLG00000008376	npm1a	94	53.516	Astatotilapia_calliptera
ENSAMXG00000010155	npm1a	99	60.305	ENSCSEG00000011165	npm1a	98	58.015	Cynoglossus_semilaevis
ENSAMXG00000010155	npm1a	98	59.310	ENSCVAG00000008960	npm1a	98	55.973	Cyprinodon_variegatus
ENSAMXG00000010155	npm1a	81	83.333	ENSDARG00000014329	npm1a	100	83.333	Danio_rerio
ENSAMXG00000010155	npm1a	99	59.524	ENSELUG00000013705	npm1a	98	56.271	Esox_lucius
ENSAMXG00000010155	npm1a	98	56.849	ENSFHEG00000012496	npm1a	98	55.290	Fundulus_heteroclitus
ENSAMXG00000010155	npm1a	98	51.351	ENSGAFG00000013059	npm1a	99	48.667	Gambusia_affinis
ENSAMXG00000010155	npm1a	97	59.011	ENSGACG00000020319	npm1a	97	56.537	Gasterosteus_aculeatus
ENSAMXG00000010155	npm1a	98	56.913	ENSHBUG00000000776	npm1a	98	54.194	Haplochromis_burtoni
ENSAMXG00000010155	npm1a	98	54.064	ENSHCOG00000001059	npm1a	96	52.650	Hippocampus_comes
ENSAMXG00000010155	npm1a	98	68.385	ENSIPUG00000019452	npm1	99	64.948	Ictalurus_punctatus
ENSAMXG00000010155	npm1a	98	53.472	ENSKMAG00000010709	npm1a	97	50.530	Kryptolebias_marmoratus
ENSAMXG00000010155	npm1a	98	57.045	ENSLBEG00000008793	npm1a	98	55.822	Labrus_bergylta
ENSAMXG00000010155	npm1a	84	53.008	ENSLOCG00000009683	npm1a	99	50.752	Lepisosteus_oculatus
ENSAMXG00000010155	npm1a	98	59.310	ENSMAMG00000009344	npm1a	81	57.732	Mastacembelus_armatus
ENSAMXG00000010155	npm1a	98	55.663	ENSMZEG00005013717	npm1a	98	53.247	Maylandia_zebra
ENSAMXG00000010155	npm1a	94	59.783	ENSMMOG00000007980	npm1a	99	57.353	Mola_mola
ENSAMXG00000010155	npm1a	97	57.093	ENSMALG00000001146	npm1a	96	56.055	Monopterus_albus
ENSAMXG00000010155	npm1a	77	76.852	ENSONIG00000001860	npm1a	74	76.852	Oreochromis_niloticus
ENSAMXG00000010155	npm1a	99	55.862	ENSORLG00000010179	npm1a	99	53.819	Oryzias_latipes
ENSAMXG00000010155	npm1a	99	56.552	ENSORLG00020020817	npm1a	99	53.310	Oryzias_latipes_hni
ENSAMXG00000010155	npm1a	99	56.207	ENSORLG00015003439	npm1a	99	54.167	Oryzias_latipes_hsok
ENSAMXG00000010155	npm1a	99	54.639	ENSOMEG00000007083	npm1a	98	53.125	Oryzias_melastigma
ENSAMXG00000010155	npm1a	99	54.849	ENSPKIG00000023943	npm1a	99	53.199	Paramormyrops_kingsleyae
ENSAMXG00000010155	npm1a	98	57.836	ENSPMGG00000011716	npm1a	98	56.877	Periophthalmus_magnuspinnatus
ENSAMXG00000010155	npm1a	99	55.137	ENSPFOG00000019173	npm1a	99	52.560	Poecilia_formosa
ENSAMXG00000010155	npm1a	99	52.365	ENSPLAG00000001093	npm1a	99	49.492	Poecilia_latipinna
ENSAMXG00000010155	npm1a	99	53.846	ENSPMEG00000012523	npm1a	99	51.333	Poecilia_mexicana
ENSAMXG00000010155	npm1a	99	54.237	ENSPREG00000001647	npm1a	99	52.365	Poecilia_reticulata
ENSAMXG00000010155	npm1a	98	54.902	ENSPNYG00000019321	npm1a	98	55.738	Pundamilia_nyererei
ENSAMXG00000010155	npm1a	100	72.603	ENSPNAG00000026891	npm1a	100	70.548	Pygocentrus_nattereri
ENSAMXG00000010155	npm1a	99	59.044	ENSSFOG00015007074	npm1a	98	56.997	Scleropages_formosus
ENSAMXG00000010155	npm1a	99	58.305	ENSSMAG00000019090	npm1a	98	55.932	Scophthalmus_maximus
ENSAMXG00000010155	npm1a	99	58.844	ENSSDUG00000015609	npm1a	98	56.803	Seriola_dumerili
ENSAMXG00000010155	npm1a	99	60.274	ENSSLDG00000017849	npm1a	98	57.877	Seriola_lalandi_dorsalis
ENSAMXG00000010155	npm1a	98	61.742	ENSSPAG00000021660	npm1a	98	58.427	Stegastes_partitus
ENSAMXG00000010155	npm1a	99	56.902	ENSTRUG00000024003	npm1a	98	55.219	Takifugu_rubripes
ENSAMXG00000010155	npm1a	97	50.192	ENSXCOG00000005958	npm1a	100	46.429	Xiphophorus_couchianus
ENSAMXG00000010155	npm1a	99	51.171	ENSXMAG00000000396	npm1a	99	49.333	Xiphophorus_maculatus