EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010209 (Gene tree)
Gene ID: 103021980
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 26588 bases
Position: chrAPWO02000203.1:471593-498180
Accession: 103021980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010523	PARP	PF00644.20	1.9e-23	1	1
ENSAMXP00000046167	PARP	PF00644.20	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000049205	-	7125	-	ENSAMXP00000046167	1645 (aa)	-	-
ENSAMXT00000010523	-	5939	XM_007232409	ENSAMXP00000010523	1724 (aa)	XP_007232471	W5KSG1

Gene Model

Click here to download ENSAMXG00000010209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010209	-	52	32.143	ENSAMXG00000035876	si:cabz01030277.1	62	32.143
ENSAMXG00000010209	-	70	33.333	ENSAMXG00000010091	-	99	35.242
ENSAMXG00000010209	-	65	30.810	ENSAMXG00000031852	-	99	33.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010209	-	99	33.667	ENSAOCG00000020608	-	98	33.890	Amphiprion_ocellaris
ENSAMXG00000010209	-	91	35.172	ENSCVAG00000009352	-	99	32.033	Cyprinodon_variegatus
ENSAMXG00000010209	-	95	30.592	ENSDARG00000112454	FO744833.2	85	30.669	Danio_rerio
ENSAMXG00000010209	-	99	49.283	ENSELUG00000004826	-	82	49.111	Esox_lucius
ENSAMXG00000010209	-	99	32.787	ENSELUG00000013643	-	99	34.356	Esox_lucius
ENSAMXG00000010209	-	96	33.498	ENSKMAG00000010882	-	89	47.826	Kryptolebias_marmoratus
ENSAMXG00000010209	-	99	33.835	ENSLBEG00000026419	-	91	33.571	Labrus_bergylta
ENSAMXG00000010209	-	95	32.612	ENSMZEG00005002061	-	82	32.776	Maylandia_zebra
ENSAMXG00000010209	-	80	49.057	ENSMZEG00005027856	-	76	49.057	Maylandia_zebra
ENSAMXG00000010209	-	85	37.017	ENSMMOG00000010419	-	89	51.261	Mola_mola
ENSAMXG00000010209	-	99	34.539	ENSONIG00000000234	-	83	34.539	Oreochromis_niloticus
ENSAMXG00000010209	-	99	31.967	ENSORLG00000017386	-	85	32.692	Oryzias_latipes
ENSAMXG00000010209	-	92	38.125	ENSORLG00000017404	-	79	48.598	Oryzias_latipes
ENSAMXG00000010209	-	92	40.606	ENSORLG00015004157	-	99	34.191	Oryzias_latipes_hsok
ENSAMXG00000010209	-	91	31.518	ENSORLG00015004253	-	95	31.333	Oryzias_latipes_hsok
ENSAMXG00000010209	-	84	44.516	ENSOMEG00000009483	-	77	44.516	Oryzias_melastigma
ENSAMXG00000010209	-	79	43.728	ENSPKIG00000004064	-	93	61.951	Paramormyrops_kingsleyae
ENSAMXG00000010209	-	99	33.529	ENSPFOG00000015738	-	79	33.529	Poecilia_formosa
ENSAMXG00000010209	-	82	47.458	ENSPREG00000017145	-	87	46.154	Poecilia_reticulata
ENSAMXG00000010209	-	52	39.521	ENSPNAG00000026750	-	94	39.521	Pygocentrus_nattereri
ENSAMXG00000010209	-	92	66.667	ENSPNAG00000005968	-	99	67.635	Pygocentrus_nattereri
ENSAMXG00000010209	-	62	63.840	ENSPNAG00000028914	-	64	63.840	Pygocentrus_nattereri
ENSAMXG00000010209	-	99	44.818	ENSSFOG00015019732	-	82	61.446	Scleropages_formosus
ENSAMXG00000010209	-	82	49.565	ENSSMAG00000016922	-	81	49.565	Scophthalmus_maximus
ENSAMXG00000010209	-	53	34.591	ENSSDUG00000013560	-	91	44.762	Seriola_dumerili
ENSAMXG00000010209	-	82	47.458	ENSXCOG00000012535	-	93	36.466	Xiphophorus_couchianus
ENSAMXG00000010209	-	53	35.185	ENSXMAG00000015158	-	90	47.009	Xiphophorus_maculatus