EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010288 (Gene tree)
Gene ID: 103041190
Gene Symbol: ddx4
Alias: vas|vasa|vlg|wu:fi24g05|zgc:109812|zgc:158535
Full Name: DEAD-box helicase 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8713 bases
Position: chr20:22898800-22907512
Accession: 103041190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041289	DEAD	PF00270.29	6.7e-47	1	1
ENSAMXP00000010602	DEAD	PF00270.29	7.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010602	-	3516	XM_022681259	ENSAMXP00000010602	676 (aa)	XP_022536980	W5KSP0
ENSAMXT00000035572	-	3453	-	ENSAMXP00000041289	655 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000010288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010288	ddx4	61	39.259	ENSAMXG00000015550	DDX5	74	38.024
ENSAMXG00000010288	ddx4	54	31.856	ENSAMXG00000032542	ddx61	70	31.389
ENSAMXG00000010288	ddx4	82	48.944	ENSAMXG00000032415	ddx3xa	64	52.575
ENSAMXG00000010288	ddx4	61	40.000	ENSAMXG00000004466	ddx5	64	40.000
ENSAMXG00000010288	ddx4	60	32.847	ENSAMXG00000024377	ddx52	63	33.092
ENSAMXG00000010288	ddx4	60	30.025	ENSAMXG00000018631	DDX39A	88	30.025
ENSAMXG00000010288	ddx4	56	30.637	ENSAMXG00000009673	ddx31	59	30.392
ENSAMXG00000010288	ddx4	54	32.782	ENSAMXG00000042612	-	78	32.782
ENSAMXG00000010288	ddx4	58	30.469	ENSAMXG00000019126	eif4a2	89	30.469
ENSAMXG00000010288	ddx4	51	35.135	ENSAMXG00000042015	-	98	41.250
ENSAMXG00000010288	ddx4	58	34.908	ENSAMXG00000020882	eif4a3	88	38.788
ENSAMXG00000010288	ddx4	56	35.326	ENSAMXG00000010727	ddx47	75	35.326
ENSAMXG00000010288	ddx4	61	34.152	ENSAMXG00000035102	ddx59	58	34.152
ENSAMXG00000010288	ddx4	61	36.364	ENSAMXG00000017597	ddx23	52	36.830
ENSAMXG00000010288	ddx4	59	39.433	ENSAMXG00000004457	ddx43	54	38.920
ENSAMXG00000010288	ddx4	58	32.817	ENSAMXG00000016919	ddx49	73	33.978
ENSAMXG00000010288	ddx4	61	38.710	ENSAMXG00000002956	DDX41	64	38.903
ENSAMXG00000010288	ddx4	80	49.812	ENSAMXG00000013396	ddx3xb	72	54.853
ENSAMXG00000010288	ddx4	55	31.421	ENSAMXG00000033980	-	70	31.421
ENSAMXG00000010288	ddx4	54	31.405	ENSAMXG00000019553	ddx6	70	31.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010288	ddx4	99	59.762	ENSG00000152670	DDX4	86	70.000	Homo_sapiens
ENSAMXG00000010288	ddx4	61	71.782	ENSAPOG00000021394	ddx4	100	72.525	Acanthochromis_polyacanthus
ENSAMXG00000010288	ddx4	99	58.153	ENSAMEG00000013960	DDX4	67	71.224	Ailuropoda_melanoleuca
ENSAMXG00000010288	ddx4	61	78.164	ENSACIG00000017623	ddx4	100	77.419	Amphilophus_citrinellus
ENSAMXG00000010288	ddx4	61	79.208	ENSAPEG00000008490	ddx4	100	78.960	Amphiprion_percula
ENSAMXG00000010288	ddx4	61	82.000	ENSATEG00000011704	ddx4	100	82.000	Anabas_testudineus
ENSAMXG00000010288	ddx4	67	72.109	ENSAPLG00000011662	DDX4	99	72.109	Anas_platyrhynchos
ENSAMXG00000010288	ddx4	93	62.880	ENSACAG00000014951	DDX4	70	70.757	Anolis_carolinensis
ENSAMXG00000010288	ddx4	97	60.483	ENSANAG00000029060	DDX4	71	72.393	Aotus_nancymaae
ENSAMXG00000010288	ddx4	78	75.781	ENSACLG00000007422	ddx4	81	77.530	Astatotilapia_calliptera
ENSAMXG00000010288	ddx4	99	57.402	ENSBTAG00000008871	DDX4	76	68.798	Bos_taurus
ENSAMXG00000010288	ddx4	66	43.207	WBGene00001600	glh-3	62	43.207	Caenorhabditis_elegans
ENSAMXG00000010288	ddx4	68	45.435	WBGene00001598	glh-1	60	45.870	Caenorhabditis_elegans
ENSAMXG00000010288	ddx4	97	60.784	ENSCJAG00000001951	DDX4	87	70.238	Callithrix_jacchus
ENSAMXG00000010288	ddx4	98	57.895	ENSCAFG00000006875	DDX4	70	69.380	Canis_familiaris
ENSAMXG00000010288	ddx4	99	60.272	ENSCAFG00020024295	DDX4	78	69.380	Canis_lupus_dingo
ENSAMXG00000010288	ddx4	78	69.231	ENSCHIG00000015567	DDX4	72	69.186	Capra_hircus
ENSAMXG00000010288	ddx4	99	57.762	ENSTSYG00000011848	DDX4	87	70.495	Carlito_syrichta
ENSAMXG00000010288	ddx4	79	54.111	ENSCPOG00000004327	DDX4	73	54.070	Cavia_porcellus
ENSAMXG00000010288	ddx4	97	60.483	ENSCCAG00000028725	DDX4	74	69.380	Cebus_capucinus
ENSAMXG00000010288	ddx4	99	59.911	ENSCATG00000044303	DDX4	86	70.000	Cercocebus_atys
ENSAMXG00000010288	ddx4	78	68.269	ENSCLAG00000005386	DDX4	70	70.876	Chinchilla_lanigera
ENSAMXG00000010288	ddx4	99	57.307	ENSCSAG00000016336	DDX4	70	68.462	Chlorocebus_sabaeus
ENSAMXG00000010288	ddx4	100	52.334	ENSCHOG00000000200	DDX4	64	65.605	Choloepus_hoffmanni
ENSAMXG00000010288	ddx4	84	66.667	ENSCPBG00000026547	DDX4	83	71.721	Chrysemys_picta_bellii
ENSAMXG00000010288	ddx4	69	63.053	ENSCING00000001412	-	76	63.100	Ciona_intestinalis
ENSAMXG00000010288	ddx4	76	60.120	ENSCSAVG00000004304	-	73	62.821	Ciona_savignyi
ENSAMXG00000010288	ddx4	99	55.407	ENSCANG00000003129	DDX4	85	63.200	Colobus_angolensis_palliatus
ENSAMXG00000010288	ddx4	87	62.479	ENSCGRG00001014961	Ddx4	70	70.816	Cricetulus_griseus_chok1gshd
ENSAMXG00000010288	ddx4	87	62.479	ENSCGRG00000001251	Ddx4	70	70.816	Cricetulus_griseus_crigri
ENSAMXG00000010288	ddx4	84	71.383	ENSCSEG00000006039	ddx4	72	68.293	Cynoglossus_semilaevis
ENSAMXG00000010288	ddx4	100	71.408	ENSDARG00000014373	ddx4	74	86.193	Danio_rerio
ENSAMXG00000010288	ddx4	85	62.803	ENSDNOG00000011658	DDX4	73	67.319	Dasypus_novemcinctus
ENSAMXG00000010288	ddx4	91	60.440	ENSDORG00000012201	Ddx4	69	71.020	Dipodomys_ordii
ENSAMXG00000010288	ddx4	65	53.630	FBgn0283442	vas	65	52.392	Drosophila_melanogaster
ENSAMXG00000010288	ddx4	64	52.668	ENSEBUG00000003290	-	83	52.326	Eptatretus_burgeri
ENSAMXG00000010288	ddx4	99	59.820	ENSEASG00005012143	DDX4	78	70.099	Equus_asinus_asinus
ENSAMXG00000010288	ddx4	99	58.333	ENSECAG00000023616	DDX4	78	69.901	Equus_caballus
ENSAMXG00000010288	ddx4	58	74.536	ENSEEUG00000012462	DDX4	52	74.536	Erinaceus_europaeus
ENSAMXG00000010288	ddx4	78	84.283	ENSELUG00000017328	ddx4	79	84.086	Esox_lucius
ENSAMXG00000010288	ddx4	99	59.172	ENSFCAG00000012560	DDX4	86	70.800	Felis_catus
ENSAMXG00000010288	ddx4	70	69.444	ENSFALG00000010910	DDX4	63	69.444	Ficedula_albicollis
ENSAMXG00000010288	ddx4	80	67.857	ENSFDAG00000003703	DDX4	69	70.408	Fukomys_damarensis
ENSAMXG00000010288	ddx4	78	77.255	ENSFHEG00000019935	ddx4	79	77.255	Fundulus_heteroclitus
ENSAMXG00000010288	ddx4	80	62.214	ENSGALG00000014713	DDX4	68	67.038	Gallus_gallus
ENSAMXG00000010288	ddx4	96	69.014	ENSGAFG00000016509	ddx4	79	78.585	Gambusia_affinis
ENSAMXG00000010288	ddx4	100	64.894	ENSGACG00000015323	ddx4	100	78.893	Gasterosteus_aculeatus
ENSAMXG00000010288	ddx4	99	59.911	ENSGGOG00000002439	DDX4	86	70.000	Gorilla_gorilla
ENSAMXG00000010288	ddx4	90	68.227	ENSHBUG00000001897	ddx4	82	77.846	Haplochromis_burtoni
ENSAMXG00000010288	ddx4	74	64.228	ENSHGLG00000003594	DDX4	63	66.739	Heterocephalus_glaber_female
ENSAMXG00000010288	ddx4	60	50.000	ENSHGLG00100001008	-	56	70.982	Heterocephalus_glaber_male
ENSAMXG00000010288	ddx4	79	72.885	ENSHCOG00000018337	ddx4	85	72.515	Hippocampus_comes
ENSAMXG00000010288	ddx4	100	77.924	ENSIPUG00000001845	ddx4	100	78.120	Ictalurus_punctatus
ENSAMXG00000010288	ddx4	99	57.917	ENSSTOG00000021044	DDX4	69	71.079	Ictidomys_tridecemlineatus
ENSAMXG00000010288	ddx4	99	56.399	ENSJJAG00000015867	Ddx4	73	68.411	Jaculus_jaculus
ENSAMXG00000010288	ddx4	77	79.371	ENSKMAG00000012439	ddx4	80	78.405	Kryptolebias_marmoratus
ENSAMXG00000010288	ddx4	78	78.125	ENSLBEG00000019504	ddx4	78	78.125	Labrus_bergylta
ENSAMXG00000010288	ddx4	74	81.725	ENSLOCG00000010887	ddx4	100	81.520	Lepisosteus_oculatus
ENSAMXG00000010288	ddx4	99	57.576	ENSLAFG00000005900	DDX4	70	70.281	Loxodonta_africana
ENSAMXG00000010288	ddx4	99	59.911	ENSMFAG00000040186	DDX4	86	70.000	Macaca_fascicularis
ENSAMXG00000010288	ddx4	99	59.911	ENSMMUG00000017386	DDX4	86	70.000	Macaca_mulatta
ENSAMXG00000010288	ddx4	99	59.911	ENSMNEG00000033343	DDX4	86	70.000	Macaca_nemestrina
ENSAMXG00000010288	ddx4	95	57.165	ENSMLEG00000038233	DDX4	84	66.809	Mandrillus_leucophaeus
ENSAMXG00000010288	ddx4	61	76.923	ENSMAMG00000003574	ddx4	100	76.675	Mastacembelus_armatus
ENSAMXG00000010288	ddx4	78	75.781	ENSMZEG00005019116	ddx4	84	77.530	Maylandia_zebra
ENSAMXG00000010288	ddx4	99	54.154	ENSMAUG00000019873	Ddx4	71	64.562	Mesocricetus_auratus
ENSAMXG00000010288	ddx4	78	53.743	ENSMICG00000028132	-	78	54.159	Microcebus_murinus
ENSAMXG00000010288	ddx4	89	64.298	ENSMICG00000008994	-	86	70.800	Microcebus_murinus
ENSAMXG00000010288	ddx4	87	61.716	ENSMOCG00000013250	Ddx4	73	68.217	Microtus_ochrogaster
ENSAMXG00000010288	ddx4	75	77.914	ENSMMOG00000004689	ddx4	86	77.505	Mola_mola
ENSAMXG00000010288	ddx4	78	67.433	ENSMODG00000019511	DDX4	69	68.713	Monodelphis_domestica
ENSAMXG00000010288	ddx4	87	61.614	MGP_CAROLIEiJ_G0018893	Ddx4	73	67.698	Mus_caroli
ENSAMXG00000010288	ddx4	85	64.894	ENSMUSG00000021758	Ddx4	71	69.200	Mus_musculus
ENSAMXG00000010288	ddx4	87	61.881	MGP_PahariEiJ_G0015964	Ddx4	73	68.217	Mus_pahari
ENSAMXG00000010288	ddx4	85	64.716	MGP_SPRETEiJ_G0019772	Ddx4	73	67.892	Mus_spretus
ENSAMXG00000010288	ddx4	99	57.431	ENSMPUG00000007596	DDX4	70	68.605	Mustela_putorius_furo
ENSAMXG00000010288	ddx4	87	62.131	ENSMLUG00000001189	DDX4	67	70.612	Myotis_lucifugus
ENSAMXG00000010288	ddx4	96	59.480	ENSNGAG00000013259	Ddx4	70	70.348	Nannospalax_galili
ENSAMXG00000010288	ddx4	75	75.403	ENSNBRG00000014442	ddx4	100	67.822	Neolamprologus_brichardi
ENSAMXG00000010288	ddx4	99	59.584	ENSNLEG00000001662	DDX4	86	70.000	Nomascus_leucogenys
ENSAMXG00000010288	ddx4	55	65.487	ENSMEUG00000007757	DDX4	51	68.421	Notamacropus_eugenii
ENSAMXG00000010288	ddx4	63	44.812	ENSOPRG00000008071	DDX4	63	50.289	Ochotona_princeps
ENSAMXG00000010288	ddx4	99	56.997	ENSODEG00000003839	-	71	73.077	Octodon_degus
ENSAMXG00000010288	ddx4	99	60.117	ENSODEG00000016951	-	68	74.145	Octodon_degus
ENSAMXG00000010288	ddx4	51	67.416	ENSONIG00000003749	-	51	85.612	Oreochromis_niloticus
ENSAMXG00000010288	ddx4	73	78.661	ENSONIG00000012063	ddx4	98	78.526	Oreochromis_niloticus
ENSAMXG00000010288	ddx4	58	69.792	ENSOANG00000004888	-	94	71.237	Ornithorhynchus_anatinus
ENSAMXG00000010288	ddx4	91	61.129	ENSOCUG00000008597	DDX4	70	69.574	Oryctolagus_cuniculus
ENSAMXG00000010288	ddx4	78	76.893	ENSORLG00000020672	ddx4	100	62.500	Oryzias_latipes
ENSAMXG00000010288	ddx4	78	76.667	ENSORLG00020014206	ddx4	82	76.667	Oryzias_latipes_hni
ENSAMXG00000010288	ddx4	78	76.863	ENSORLG00015016600	ddx4	100	62.500	Oryzias_latipes_hsok
ENSAMXG00000010288	ddx4	78	76.459	ENSOMEG00000010651	ddx4	83	77.734	Oryzias_melastigma
ENSAMXG00000010288	ddx4	87	62.620	ENSOGAG00000007588	DDX4	70	69.574	Otolemur_garnettii
ENSAMXG00000010288	ddx4	97	58.083	ENSOARG00000007644	DDX4	70	69.186	Ovis_aries
ENSAMXG00000010288	ddx4	99	59.762	ENSPPAG00000033915	DDX4	86	70.000	Pan_paniscus
ENSAMXG00000010288	ddx4	99	58.580	ENSPPRG00000011417	DDX4	71	70.140	Panthera_pardus
ENSAMXG00000010288	ddx4	99	58.284	ENSPTIG00000007748	DDX4	85	67.000	Panthera_tigris_altaica
ENSAMXG00000010288	ddx4	99	59.762	ENSPTRG00000016884	DDX4	86	70.000	Pan_troglodytes
ENSAMXG00000010288	ddx4	99	59.463	ENSPANG00000010945	DDX4	84	71.020	Papio_anubis
ENSAMXG00000010288	ddx4	81	67.724	ENSPSIG00000017179	DDX4	74	73.799	Pelodiscus_sinensis
ENSAMXG00000010288	ddx4	61	69.674	ENSPMGG00000015642	ddx4	99	68.922	Periophthalmus_magnuspinnatus
ENSAMXG00000010288	ddx4	99	57.303	ENSPEMG00000010086	Ddx4	73	68.992	Peromyscus_maniculatus_bairdii
ENSAMXG00000010288	ddx4	89	62.583	ENSPCIG00000024758	DDX4	76	69.109	Phascolarctos_cinereus
ENSAMXG00000010288	ddx4	96	69.062	ENSPFOG00000018842	ddx4	79	79.175	Poecilia_formosa
ENSAMXG00000010288	ddx4	96	69.219	ENSPLAG00000020726	ddx4	79	79.371	Poecilia_latipinna
ENSAMXG00000010288	ddx4	96	69.062	ENSPMEG00000002976	ddx4	81	79.175	Poecilia_mexicana
ENSAMXG00000010288	ddx4	97	68.654	ENSPREG00000017840	ddx4	81	78.978	Poecilia_reticulata
ENSAMXG00000010288	ddx4	99	57.963	ENSPPYG00000015472	DDX4	70	69.186	Pongo_abelii
ENSAMXG00000010288	ddx4	78	65.583	ENSPCAG00000002675	DDX4	69	66.208	Procavia_capensis
ENSAMXG00000010288	ddx4	98	57.977	ENSPVAG00000002448	DDX4	73	69.186	Pteropus_vampyrus
ENSAMXG00000010288	ddx4	82	72.542	ENSPNYG00000022212	ddx4	84	77.733	Pundamilia_nyererei
ENSAMXG00000010288	ddx4	90	81.818	ENSPNAG00000003686	ddx4	97	83.902	Pygocentrus_nattereri
ENSAMXG00000010288	ddx4	80	67.917	ENSRNOG00000026686	Ddx4	69	71.605	Rattus_norvegicus
ENSAMXG00000010288	ddx4	99	59.613	ENSRBIG00000028795	DDX4	82	72.727	Rhinopithecus_bieti
ENSAMXG00000010288	ddx4	99	59.552	ENSRROG00000045392	DDX4	82	73.150	Rhinopithecus_roxellana
ENSAMXG00000010288	ddx4	72	48.583	YPL119C	DBP1	68	52.257	Saccharomyces_cerevisiae
ENSAMXG00000010288	ddx4	97	60.909	ENSSBOG00000035231	DDX4	74	69.186	Saimiri_boliviensis_boliviensis
ENSAMXG00000010288	ddx4	92	60.987	ENSSHAG00000009132	DDX4	70	68.911	Sarcophilus_harrisii
ENSAMXG00000010288	ddx4	75	82.857	ENSSFOG00015006531	ddx4	76	82.787	Scleropages_formosus
ENSAMXG00000010288	ddx4	74	76.543	ENSSMAG00000009800	ddx4	79	74.656	Scophthalmus_maximus
ENSAMXG00000010288	ddx4	78	77.369	ENSSDUG00000022015	ddx4	80	77.369	Seriola_dumerili
ENSAMXG00000010288	ddx4	61	80.149	ENSSLDG00000015312	ddx4	100	80.149	Seriola_lalandi_dorsalis
ENSAMXG00000010288	ddx4	65	70.115	ENSSARG00000004206	DDX4	55	74.129	Sorex_araneus
ENSAMXG00000010288	ddx4	70	73.753	ENSSPUG00000007260	DDX4	79	73.753	Sphenodon_punctatus
ENSAMXG00000010288	ddx4	61	80.149	ENSSPAG00000014307	ddx4	100	79.156	Stegastes_partitus
ENSAMXG00000010288	ddx4	97	58.798	ENSSSCG00000016913	DDX4	67	71.020	Sus_scrofa
ENSAMXG00000010288	ddx4	67	70.642	ENSTGUG00000002548	DDX4	99	70.642	Taeniopygia_guttata
ENSAMXG00000010288	ddx4	78	63.209	ENSTNIG00000014474	ddx4	90	63.014	Tetraodon_nigroviridis
ENSAMXG00000010288	ddx4	60	76.768	ENSTBEG00000003569	DDX4	55	71.053	Tupaia_belangeri
ENSAMXG00000010288	ddx4	87	61.401	ENSTTRG00000009316	DDX4	70	67.961	Tursiops_truncatus
ENSAMXG00000010288	ddx4	99	60.122	ENSUAMG00000023028	DDX4	78	68.798	Ursus_americanus
ENSAMXG00000010288	ddx4	99	60.122	ENSUMAG00000009291	DDX4	78	68.798	Ursus_maritimus
ENSAMXG00000010288	ddx4	97	58.224	ENSVPAG00000009491	DDX4	71	68.798	Vicugna_pacos
ENSAMXG00000010288	ddx4	98	58.850	ENSVVUG00000021369	DDX4	74	69.380	Vulpes_vulpes
ENSAMXG00000010288	ddx4	93	58.188	ENSXETG00000030832	DDX4	70	70.227	Xenopus_tropicalis
ENSAMXG00000010288	ddx4	96	68.858	ENSXMAG00000009677	ddx4	83	78.782	Xiphophorus_maculatus