EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010470 (Gene tree)
Gene ID: 103045177
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 15374 bases
Position: chr10:24920149-24935522
Accession: 103045177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010801	Fox-1_C	PF12414.8	4.9e-32	1	1
ENSAMXP00000010801	RRM_1	PF00076.22	8.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010801	-	1149	XM_007256869	ENSAMXP00000010801	382 (aa)	XP_007256931	W5KT89

Gene Model

Click here to download ENSAMXG00000010470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010470	rbfox1l	74	61.972	ENSAMXG00000037246	rbfox3a	82	64.769
ENSAMXG00000010470	rbfox1l	85	58.055	ENSAMXG00000042841	rbfox3b	62	74.449
ENSAMXG00000010470	rbfox1l	64	60.727	ENSAMXG00000011451	rbfox2	70	58.801

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010470	rbfox1l	97	85.294	ENSAPOG00000016304	rbfox1l	98	87.166	Acanthochromis_polyacanthus
ENSAMXG00000010470	rbfox1l	100	81.675	ENSACIG00000006441	rbfox1l	100	81.675	Amphilophus_citrinellus
ENSAMXG00000010470	rbfox1l	83	82.555	ENSAOCG00000020938	rbfox1l	94	80.062	Amphiprion_ocellaris
ENSAMXG00000010470	rbfox1l	100	84.197	ENSAPEG00000008232	rbfox1l	100	84.197	Amphiprion_percula
ENSAMXG00000010470	rbfox1l	100	85.340	ENSATEG00000022649	rbfox1l	100	85.079	Anabas_testudineus
ENSAMXG00000010470	rbfox1l	64	72.908	ENSACAG00000011931	-	89	75.610	Anolis_carolinensis
ENSAMXG00000010470	rbfox1l	100	84.974	ENSACLG00000021394	rbfox1l	100	85.233	Astatotilapia_calliptera
ENSAMXG00000010470	rbfox1l	65	69.841	ENSCPBG00000010944	-	100	58.355	Chrysemys_picta_bellii
ENSAMXG00000010470	rbfox1l	100	85.602	ENSCSEG00000018898	rbfox1l	100	87.173	Cynoglossus_semilaevis
ENSAMXG00000010470	rbfox1l	100	83.938	ENSCVAG00000007986	rbfox1l	100	83.938	Cyprinodon_variegatus
ENSAMXG00000010470	rbfox1l	100	91.885	ENSDARG00000021184	rbfox1l	100	91.885	Danio_rerio
ENSAMXG00000010470	rbfox1l	100	81.726	ENSELUG00000015077	rbfox1l	100	82.785	Esox_lucius
ENSAMXG00000010470	rbfox1l	96	81.081	ENSFHEG00000016557	rbfox1l	95	92.683	Fundulus_heteroclitus
ENSAMXG00000010470	rbfox1l	100	83.420	ENSGMOG00000005040	rbfox1l	100	83.161	Gadus_morhua
ENSAMXG00000010470	rbfox1l	92	83.193	ENSGAFG00000013211	rbfox1l	97	83.754	Gambusia_affinis
ENSAMXG00000010470	rbfox1l	100	86.010	ENSGACG00000010757	rbfox1l	100	85.751	Gasterosteus_aculeatus
ENSAMXG00000010470	rbfox1l	69	68.045	ENSGAGG00000012440	-	84	74.897	Gopherus_agassizii
ENSAMXG00000010470	rbfox1l	100	84.974	ENSHBUG00000013406	rbfox1l	100	85.233	Haplochromis_burtoni
ENSAMXG00000010470	rbfox1l	100	84.974	ENSHCOG00000020771	rbfox1l	100	84.974	Hippocampus_comes
ENSAMXG00000010470	rbfox1l	99	85.185	ENSIPUG00000000065	rbfox1l	99	86.441	Ictalurus_punctatus
ENSAMXG00000010470	rbfox1l	100	85.530	ENSKMAG00000005146	rbfox1l	100	85.530	Kryptolebias_marmoratus
ENSAMXG00000010470	rbfox1l	100	84.974	ENSLBEG00000017089	rbfox1l	100	87.565	Labrus_bergylta
ENSAMXG00000010470	rbfox1l	100	84.715	ENSMAMG00000019480	rbfox1l	100	86.528	Mastacembelus_armatus
ENSAMXG00000010470	rbfox1l	100	84.974	ENSMZEG00005016374	rbfox1l	100	85.233	Maylandia_zebra
ENSAMXG00000010470	rbfox1l	100	86.126	ENSMMOG00000016530	rbfox1l	100	86.126	Mola_mola
ENSAMXG00000010470	rbfox1l	100	82.723	ENSMALG00000009384	rbfox1l	100	85.079	Monopterus_albus
ENSAMXG00000010470	rbfox1l	100	86.423	ENSNBRG00000003346	rbfox1l	100	86.423	Neolamprologus_brichardi
ENSAMXG00000010470	rbfox1l	100	85.751	ENSONIG00000012754	rbfox1l	100	85.751	Oreochromis_niloticus
ENSAMXG00000010470	rbfox1l	100	83.161	ENSORLG00000011269	rbfox1l	100	83.938	Oryzias_latipes
ENSAMXG00000010470	rbfox1l	100	82.902	ENSORLG00020000162	rbfox1l	100	84.715	Oryzias_latipes_hni
ENSAMXG00000010470	rbfox1l	100	82.642	ENSORLG00015013464	rbfox1l	100	86.269	Oryzias_latipes_hsok
ENSAMXG00000010470	rbfox1l	100	83.938	ENSOMEG00000010584	rbfox1l	100	86.788	Oryzias_melastigma
ENSAMXG00000010470	rbfox1l	100	90.314	ENSPKIG00000012029	rbfox1l	100	90.838	Paramormyrops_kingsleyae
ENSAMXG00000010470	rbfox1l	100	78.329	ENSPMGG00000012082	rbfox1l	100	80.105	Periophthalmus_magnuspinnatus
ENSAMXG00000010470	rbfox1l	100	84.197	ENSPFOG00000009338	rbfox1l	100	84.715	Poecilia_formosa
ENSAMXG00000010470	rbfox1l	85	76.364	ENSPLAG00000012816	rbfox1l	99	76.061	Poecilia_latipinna
ENSAMXG00000010470	rbfox1l	100	80.829	ENSPMEG00000017597	rbfox1l	100	79.793	Poecilia_mexicana
ENSAMXG00000010470	rbfox1l	100	81.088	ENSPREG00000007940	rbfox1l	100	80.052	Poecilia_reticulata
ENSAMXG00000010470	rbfox1l	100	84.715	ENSPNYG00000002098	rbfox1l	100	84.974	Pundamilia_nyererei
ENSAMXG00000010470	rbfox1l	100	92.950	ENSPNAG00000001620	rbfox1l	100	93.473	Pygocentrus_nattereri
ENSAMXG00000010470	rbfox1l	100	88.220	ENSSFOG00015000675	rbfox1l	100	88.743	Scleropages_formosus
ENSAMXG00000010470	rbfox1l	100	83.938	ENSSMAG00000013090	rbfox1l	100	84.974	Scophthalmus_maximus
ENSAMXG00000010470	rbfox1l	100	83.505	ENSSDUG00000008705	rbfox1l	100	85.825	Seriola_dumerili
ENSAMXG00000010470	rbfox1l	100	83.505	ENSSLDG00000022256	rbfox1l	100	85.825	Seriola_lalandi_dorsalis
ENSAMXG00000010470	rbfox1l	100	84.197	ENSSPAG00000016620	rbfox1l	100	84.197	Stegastes_partitus
ENSAMXG00000010470	rbfox1l	96	82.385	ENSTRUG00000015905	rbfox1l	100	84.011	Takifugu_rubripes
ENSAMXG00000010470	rbfox1l	64	81.203	ENSTNIG00000008088	rbfox1l	97	85.000	Tetraodon_nigroviridis
ENSAMXG00000010470	rbfox1l	100	82.642	ENSXMAG00000023471	rbfox1l	100	84.974	Xiphophorus_maculatus