EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000010533 (Gene tree)
Gene ID: 103041850
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3139 bases
Position: chr24:39236335-39239473
Accession: 103041850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010816	PTS_2-RNA	PF01885.16	1.3e-65	1	1
ENSAMXP00000034073	PTS_2-RNA	PF01885.16	1.8e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010816	-	1117	XM_007246394	ENSAMXP00000010816	227 (aa)	XP_007246456	W5KTA4
ENSAMXT00000035887	-	1225	-	ENSAMXP00000034073	263 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000010533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010533	trpt1	99	54.222	ENSG00000149743	TRPT1	87	56.287	Homo_sapiens
ENSAMXG00000010533	trpt1	91	70.048	ENSAPOG00000012925	trpt1	90	70.048	Acanthochromis_polyacanthus
ENSAMXG00000010533	trpt1	91	57.005	ENSAMEG00000018040	TRPT1	81	57.005	Ailuropoda_melanoleuca
ENSAMXG00000010533	trpt1	87	72.589	ENSACIG00000022413	trpt1	89	72.500	Amphilophus_citrinellus
ENSAMXG00000010533	trpt1	91	71.981	ENSAOCG00000001163	trpt1	78	71.981	Amphiprion_ocellaris
ENSAMXG00000010533	trpt1	91	71.981	ENSAPEG00000009873	trpt1	90	71.981	Amphiprion_percula
ENSAMXG00000010533	trpt1	91	73.913	ENSATEG00000014371	trpt1	91	73.913	Anabas_testudineus
ENSAMXG00000010533	trpt1	89	59.406	ENSACAG00000000696	TRPT1	88	60.804	Anolis_carolinensis
ENSAMXG00000010533	trpt1	99	55.111	ENSANAG00000019580	TRPT1	87	51.256	Aotus_nancymaae
ENSAMXG00000010533	trpt1	91	72.464	ENSACLG00000016893	trpt1	90	72.464	Astatotilapia_calliptera
ENSAMXG00000010533	trpt1	97	54.626	ENSBTAG00000016555	TRPT1	88	56.044	Bos_taurus
ENSAMXG00000010533	trpt1	99	54.425	ENSCJAG00000018169	TRPT1	80	58.128	Callithrix_jacchus
ENSAMXG00000010533	trpt1	91	58.454	ENSCAFG00000014591	TRPT1	81	59.113	Canis_familiaris
ENSAMXG00000010533	trpt1	91	58.454	ENSCAFG00020014101	TRPT1	82	59.606	Canis_lupus_dingo
ENSAMXG00000010533	trpt1	96	56.364	ENSCHIG00000021308	TRPT1	81	58.621	Capra_hircus
ENSAMXG00000010533	trpt1	78	55.618	ENSTSYG00000026766	TRPT1	88	55.618	Carlito_syrichta
ENSAMXG00000010533	trpt1	94	57.674	ENSCAPG00000016934	TRPT1	85	59.512	Cavia_aperea
ENSAMXG00000010533	trpt1	97	55.752	ENSCPOG00000002923	TRPT1	82	58.937	Cavia_porcellus
ENSAMXG00000010533	trpt1	75	56.977	ENSCCAG00000025683	TRPT1	88	56.180	Cebus_capucinus
ENSAMXG00000010533	trpt1	99	54.222	ENSCATG00000031563	TRPT1	80	57.143	Cercocebus_atys
ENSAMXG00000010533	trpt1	97	56.757	ENSCLAG00000016380	TRPT1	80	60.099	Chinchilla_lanigera
ENSAMXG00000010533	trpt1	99	54.425	ENSCSAG00000006952	TRPT1	80	57.353	Chlorocebus_sabaeus
ENSAMXG00000010533	trpt1	64	45.890	ENSCING00000002405	-	82	43.791	Ciona_intestinalis
ENSAMXG00000010533	trpt1	85	38.579	ENSCING00000024241	-	80	38.191	Ciona_intestinalis
ENSAMXG00000010533	trpt1	87	43.000	ENSCSAVG00000011071	-	67	42.009	Ciona_savignyi
ENSAMXG00000010533	trpt1	91	41.509	ENSCSAVG00000003949	-	87	42.640	Ciona_savignyi
ENSAMXG00000010533	trpt1	98	54.464	ENSCANG00000042980	TRPT1	80	57.635	Colobus_angolensis_palliatus
ENSAMXG00000010533	trpt1	97	54.751	ENSCGRG00001008474	Trpt1	81	57.143	Cricetulus_griseus_chok1gshd
ENSAMXG00000010533	trpt1	97	54.751	ENSCGRG00000009793	Trpt1	81	57.143	Cricetulus_griseus_crigri
ENSAMXG00000010533	trpt1	89	73.134	ENSCSEG00000005840	trpt1	87	72.772	Cynoglossus_semilaevis
ENSAMXG00000010533	trpt1	96	70.046	ENSCVAG00000006318	trpt1	95	70.531	Cyprinodon_variegatus
ENSAMXG00000010533	trpt1	91	77.670	ENSDARG00000037628	trpt1	92	77.670	Danio_rerio
ENSAMXG00000010533	trpt1	93	46.479	ENSDNOG00000044923	TRPT1	68	48.958	Dasypus_novemcinctus
ENSAMXG00000010533	trpt1	98	53.947	ENSDORG00000001624	Trpt1	84	57.005	Dipodomys_ordii
ENSAMXG00000010533	trpt1	84	45.361	FBgn0053057	CG33057	90	45.641	Drosophila_melanogaster
ENSAMXG00000010533	trpt1	96	52.489	ENSEBUG00000012569	-	94	53.107	Eptatretus_burgeri
ENSAMXG00000010533	trpt1	96	56.621	ENSEASG00005019983	TRPT1	81	57.488	Equus_asinus_asinus
ENSAMXG00000010533	trpt1	96	55.708	ENSECAG00000009917	TRPT1	88	57.286	Equus_caballus
ENSAMXG00000010533	trpt1	96	57.078	ENSEEUG00000012739	TRPT1	80	58.621	Erinaceus_europaeus
ENSAMXG00000010533	trpt1	91	74.879	ENSELUG00000007385	trpt1	90	74.879	Esox_lucius
ENSAMXG00000010533	trpt1	98	53.571	ENSFCAG00000024621	TRPT1	88	53.846	Felis_catus
ENSAMXG00000010533	trpt1	97	56.306	ENSFDAG00000002738	TRPT1	80	59.606	Fukomys_damarensis
ENSAMXG00000010533	trpt1	93	71.429	ENSFHEG00000002434	trpt1	90	71.981	Fundulus_heteroclitus
ENSAMXG00000010533	trpt1	85	70.833	ENSGMOG00000008716	trpt1	93	70.833	Gadus_morhua
ENSAMXG00000010533	trpt1	86	52.308	ENSGALG00000050256	TRPT1	77	47.186	Gallus_gallus
ENSAMXG00000010533	trpt1	91	71.014	ENSGAFG00000016762	trpt1	92	71.014	Gambusia_affinis
ENSAMXG00000010533	trpt1	87	70.051	ENSGACG00000016927	trpt1	96	68.391	Gasterosteus_aculeatus
ENSAMXG00000010533	trpt1	99	54.667	ENSGGOG00000012163	TRPT1	81	56.522	Gorilla_gorilla
ENSAMXG00000010533	trpt1	91	72.947	ENSHBUG00000012772	trpt1	90	72.947	Haplochromis_burtoni
ENSAMXG00000010533	trpt1	95	56.481	ENSHGLG00000013748	TRPT1	80	59.113	Heterocephalus_glaber_female
ENSAMXG00000010533	trpt1	95	56.481	ENSHGLG00100013048	TRPT1	80	59.113	Heterocephalus_glaber_male
ENSAMXG00000010533	trpt1	88	72.000	ENSHCOG00000000218	trpt1	89	70.874	Hippocampus_comes
ENSAMXG00000010533	trpt1	100	77.729	ENSIPUG00000002573	trpt1	100	78.166	Ictalurus_punctatus
ENSAMXG00000010533	trpt1	95	56.944	ENSSTOG00000014285	TRPT1	79	60.000	Ictidomys_tridecemlineatus
ENSAMXG00000010533	trpt1	97	55.656	ENSJJAG00000010855	Trpt1	83	57.488	Jaculus_jaculus
ENSAMXG00000010533	trpt1	91	70.531	ENSKMAG00000004214	trpt1	90	70.531	Kryptolebias_marmoratus
ENSAMXG00000010533	trpt1	88	75.500	ENSLBEG00000005640	trpt1	90	74.146	Labrus_bergylta
ENSAMXG00000010533	trpt1	90	57.843	ENSLACG00000016922	TRPT1	82	59.296	Latimeria_chalumnae
ENSAMXG00000010533	trpt1	90	63.725	ENSLOCG00000001345	trpt1	83	63.725	Lepisosteus_oculatus
ENSAMXG00000010533	trpt1	98	53.571	ENSLAFG00000009075	TRPT1	81	56.039	Loxodonta_africana
ENSAMXG00000010533	trpt1	99	54.222	ENSMFAG00000036828	TRPT1	80	57.143	Macaca_fascicularis
ENSAMXG00000010533	trpt1	99	54.667	ENSMMUG00000012940	TRPT1	81	56.522	Macaca_mulatta
ENSAMXG00000010533	trpt1	99	54.222	ENSMNEG00000033348	TRPT1	80	57.143	Macaca_nemestrina
ENSAMXG00000010533	trpt1	99	54.667	ENSMLEG00000031438	TRPT1	80	57.635	Mandrillus_leucophaeus
ENSAMXG00000010533	trpt1	91	71.981	ENSMAMG00000021617	trpt1	90	71.981	Mastacembelus_armatus
ENSAMXG00000010533	trpt1	91	72.947	ENSMZEG00005004773	trpt1	90	72.947	Maylandia_zebra
ENSAMXG00000010533	trpt1	72	56.627	ENSMAUG00000014107	Trpt1	82	55.814	Mesocricetus_auratus
ENSAMXG00000010533	trpt1	98	55.804	ENSMICG00000016950	TRPT1	88	53.000	Microcebus_murinus
ENSAMXG00000010533	trpt1	97	56.109	ENSMOCG00000021342	Trpt1	81	58.621	Microtus_ochrogaster
ENSAMXG00000010533	trpt1	88	72.500	ENSMMOG00000002896	trpt1	88	71.707	Mola_mola
ENSAMXG00000010533	trpt1	93	59.624	ENSMODG00000010226	TRPT1	89	60.101	Monodelphis_domestica
ENSAMXG00000010533	trpt1	91	72.947	ENSMALG00000012208	trpt1	84	72.947	Monopterus_albus
ENSAMXG00000010533	trpt1	97	56.109	MGP_CAROLIEiJ_G0022627	Trpt1	81	58.128	Mus_caroli
ENSAMXG00000010533	trpt1	97	56.109	ENSMUSG00000047656	Trpt1	81	58.128	Mus_musculus
ENSAMXG00000010533	trpt1	97	54.955	MGP_PahariEiJ_G0014121	Trpt1	81	57.635	Mus_pahari
ENSAMXG00000010533	trpt1	97	55.455	MGP_SPRETEiJ_G0023537	Trpt1	81	57.426	Mus_spretus
ENSAMXG00000010533	trpt1	96	54.795	ENSMPUG00000013272	TRPT1	75	55.072	Mustela_putorius_furo
ENSAMXG00000010533	trpt1	91	57.488	ENSMLUG00000024858	TRPT1	80	58.621	Myotis_lucifugus
ENSAMXG00000010533	trpt1	77	56.250	ENSNGAG00000007665	Trpt1	86	56.742	Nannospalax_galili
ENSAMXG00000010533	trpt1	91	67.568	ENSNBRG00000001528	trpt1	91	67.568	Neolamprologus_brichardi
ENSAMXG00000010533	trpt1	89	45.098	ENSNLEG00000033525	-	88	43.094	Nomascus_leucogenys
ENSAMXG00000010533	trpt1	85	60.513	ENSMEUG00000000943	TRPT1	79	59.500	Notamacropus_eugenii
ENSAMXG00000010533	trpt1	93	57.746	ENSOPRG00000015917	TRPT1	81	59.113	Ochotona_princeps
ENSAMXG00000010533	trpt1	97	56.757	ENSODEG00000015724	TRPT1	83	59.420	Octodon_degus
ENSAMXG00000010533	trpt1	91	72.464	ENSONIG00000005333	trpt1	90	72.464	Oreochromis_niloticus
ENSAMXG00000010533	trpt1	88	50.000	ENSOANG00000010375	TRPT1	89	50.244	Ornithorhynchus_anatinus
ENSAMXG00000010533	trpt1	98	53.571	ENSOCUG00000022244	TRPT1	82	56.522	Oryctolagus_cuniculus
ENSAMXG00000010533	trpt1	93	69.811	ENSORLG00000025159	trpt1	91	70.647	Oryzias_latipes
ENSAMXG00000010533	trpt1	99	67.257	ENSORLG00020018944	trpt1	92	68.932	Oryzias_latipes_hni
ENSAMXG00000010533	trpt1	84	66.492	ENSORLG00015017108	trpt1	80	69.061	Oryzias_latipes_hsok
ENSAMXG00000010533	trpt1	96	67.123	ENSOMEG00000018645	trpt1	92	68.599	Oryzias_melastigma
ENSAMXG00000010533	trpt1	92	56.938	ENSOGAG00000007134	TRPT1	80	58.128	Otolemur_garnettii
ENSAMXG00000010533	trpt1	96	56.364	ENSOARG00000004961	TRPT1	81	57.488	Ovis_aries
ENSAMXG00000010533	trpt1	80	54.396	ENSPPAG00000027600	TRPT1	88	54.396	Pan_paniscus
ENSAMXG00000010533	trpt1	80	54.396	ENSPPRG00000022870	TRPT1	88	54.396	Panthera_pardus
ENSAMXG00000010533	trpt1	75	55.233	ENSPTIG00000018872	TRPT1	86	54.494	Panthera_tigris_altaica
ENSAMXG00000010533	trpt1	80	54.396	ENSPTRG00000003822	TRPT1	88	54.396	Pan_troglodytes
ENSAMXG00000010533	trpt1	99	54.222	ENSPANG00000011001	TRPT1	80	57.143	Papio_anubis
ENSAMXG00000010533	trpt1	91	71.845	ENSPKIG00000008323	trpt1	89	71.845	Paramormyrops_kingsleyae
ENSAMXG00000010533	trpt1	93	55.760	ENSPSIG00000009910	TRPT1	85	56.436	Pelodiscus_sinensis
ENSAMXG00000010533	trpt1	94	68.519	ENSPMGG00000005037	trpt1	92	69.417	Periophthalmus_magnuspinnatus
ENSAMXG00000010533	trpt1	96	55.000	ENSPEMG00000013720	Trpt1	81	57.635	Peromyscus_maniculatus_bairdii
ENSAMXG00000010533	trpt1	90	55.882	ENSPMAG00000001449	trpt1	98	55.882	Petromyzon_marinus
ENSAMXG00000010533	trpt1	88	58.000	ENSPCIG00000008060	TRPT1	88	52.980	Phascolarctos_cinereus
ENSAMXG00000010533	trpt1	91	69.565	ENSPFOG00000009475	trpt1	92	69.565	Poecilia_formosa
ENSAMXG00000010533	trpt1	91	68.599	ENSPMEG00000003682	trpt1	92	68.599	Poecilia_mexicana
ENSAMXG00000010533	trpt1	91	71.014	ENSPREG00000015408	trpt1	92	71.014	Poecilia_reticulata
ENSAMXG00000010533	trpt1	91	57.005	ENSPPYG00000003116	TRPT1	81	57.005	Pongo_abelii
ENSAMXG00000010533	trpt1	95	55.814	ENSPCAG00000000762	TRPT1	80	57.921	Procavia_capensis
ENSAMXG00000010533	trpt1	98	55.605	ENSPCOG00000010370	TRPT1	88	52.500	Propithecus_coquereli
ENSAMXG00000010533	trpt1	91	67.568	ENSPNYG00000014805	trpt1	91	67.568	Pundamilia_nyererei
ENSAMXG00000010533	trpt1	100	89.868	ENSPNAG00000008548	trpt1	100	89.868	Pygocentrus_nattereri
ENSAMXG00000010533	trpt1	97	55.204	ENSRNOG00000023023	Trpt1	83	56.522	Rattus_norvegicus
ENSAMXG00000010533	trpt1	98	54.018	ENSRBIG00000040432	TRPT1	81	56.039	Rhinopithecus_bieti
ENSAMXG00000010533	trpt1	98	54.911	ENSRROG00000044905	TRPT1	81	57.005	Rhinopithecus_roxellana
ENSAMXG00000010533	trpt1	79	35.294	YOL102C	TPT1	80	35.676	Saccharomyces_cerevisiae
ENSAMXG00000010533	trpt1	99	54.222	ENSSBOG00000021466	TRPT1	81	56.039	Saimiri_boliviensis_boliviensis
ENSAMXG00000010533	trpt1	91	71.498	ENSSFOG00015005844	trpt1	92	71.498	Scleropages_formosus
ENSAMXG00000010533	trpt1	92	73.077	ENSSMAG00000017744	trpt1	91	73.430	Scophthalmus_maximus
ENSAMXG00000010533	trpt1	91	72.464	ENSSDUG00000017106	trpt1	92	72.464	Seriola_dumerili
ENSAMXG00000010533	trpt1	88	72.500	ENSSLDG00000015957	trpt1	82	74.737	Seriola_lalandi_dorsalis
ENSAMXG00000010533	trpt1	85	66.839	ENSSPAG00000007557	trpt1	77	67.010	Stegastes_partitus
ENSAMXG00000010533	trpt1	95	57.143	ENSSSCG00000013040	TRPT1	79	57.971	Sus_scrofa
ENSAMXG00000010533	trpt1	88	73.500	ENSTRUG00000023723	trpt1	97	68.889	Takifugu_rubripes
ENSAMXG00000010533	trpt1	91	71.359	ENSTNIG00000003381	trpt1	89	71.359	Tetraodon_nigroviridis
ENSAMXG00000010533	trpt1	96	54.338	ENSTBEG00000006023	TRPT1	81	55.556	Tupaia_belangeri
ENSAMXG00000010533	trpt1	98	53.571	ENSTTRG00000010252	TRPT1	81	56.039	Tursiops_truncatus
ENSAMXG00000010533	trpt1	96	55.708	ENSUAMG00000015208	TRPT1	81	56.522	Ursus_americanus
ENSAMXG00000010533	trpt1	96	55.708	ENSUMAG00000001410	TRPT1	81	56.522	Ursus_maritimus
ENSAMXG00000010533	trpt1	98	55.804	ENSVVUG00000029774	TRPT1	83	59.606	Vulpes_vulpes
ENSAMXG00000010533	trpt1	92	55.714	ENSXETG00000007196	trpt1	86	57.000	Xenopus_tropicalis
ENSAMXG00000010533	trpt1	89	69.458	ENSXCOG00000001614	trpt1	92	68.447	Xiphophorus_couchianus
ENSAMXG00000010533	trpt1	91	70.531	ENSXMAG00000003142	trpt1	93	70.531	Xiphophorus_maculatus