EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010570 (Gene tree)
Gene ID: 103039693
Gene Symbol: raver2
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 107693 bases
Position: chr13:43449814-43557506
Accession: 103039693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048968	RRM_1	PF00076.22	4.2e-30	1	3
ENSAMXP00000048968	RRM_1	PF00076.22	4.2e-30	2	3
ENSAMXP00000048968	RRM_1	PF00076.22	4.2e-30	3	3
ENSAMXP00000010858	RRM_1	PF00076.22	4.8e-30	1	3
ENSAMXP00000010858	RRM_1	PF00076.22	4.8e-30	2	3
ENSAMXP00000010858	RRM_1	PF00076.22	4.8e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010858	-	2532	XM_007248212	ENSAMXP00000010858	843 (aa)	XP_007248274	W5KTE6
ENSAMXT00000034236	-	2433	-	ENSAMXP00000048968	810 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000010570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010570	raver2	84	60.465	ENSAMXG00000005132	raver1	84	60.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010570	raver2	67	51.890	ENSG00000162437	RAVER2	89	44.025	Homo_sapiens
ENSAMXG00000010570	raver2	100	61.247	ENSAPOG00000002766	raver2	100	60.512	Acanthochromis_polyacanthus
ENSAMXG00000010570	raver2	65	52.941	ENSAMEG00000015178	RAVER2	85	53.321	Ailuropoda_melanoleuca
ENSAMXG00000010570	raver2	72	66.404	ENSATEG00000019679	raver2	95	75.092	Anabas_testudineus
ENSAMXG00000010570	raver2	68	47.119	ENSAPLG00000013160	RAVER2	84	48.980	Anas_platyrhynchos
ENSAMXG00000010570	raver2	94	40.511	ENSACAG00000008443	RAVER2	98	40.511	Anolis_carolinensis
ENSAMXG00000010570	raver2	69	51.007	ENSANAG00000025857	RAVER2	83	51.269	Aotus_nancymaae
ENSAMXG00000010570	raver2	100	62.528	ENSACLG00000001840	raver2	100	61.641	Astatotilapia_calliptera
ENSAMXG00000010570	raver2	70	51.155	ENSBTAG00000030686	RAVER2	88	51.414	Bos_taurus
ENSAMXG00000010570	raver2	70	49.175	ENSCJAG00000016724	RAVER2	84	49.340	Callithrix_jacchus
ENSAMXG00000010570	raver2	58	50.100	ENSCAFG00000018617	RAVER2	84	50.607	Canis_familiaris
ENSAMXG00000010570	raver2	72	51.148	ENSCAFG00020018120	RAVER2	79	53.521	Canis_lupus_dingo
ENSAMXG00000010570	raver2	67	51.986	ENSCHIG00000005514	RAVER2	84	51.244	Capra_hircus
ENSAMXG00000010570	raver2	63	51.654	ENSTSYG00000006019	RAVER2	75	51.948	Carlito_syrichta
ENSAMXG00000010570	raver2	62	42.884	ENSCAPG00000013527	RAVER2	99	55.429	Cavia_aperea
ENSAMXG00000010570	raver2	65	47.080	ENSCPOG00000005986	RAVER2	87	47.509	Cavia_porcellus
ENSAMXG00000010570	raver2	67	50.600	ENSCCAG00000029834	RAVER2	80	50.865	Cebus_capucinus
ENSAMXG00000010570	raver2	67	51.478	ENSCATG00000040658	RAVER2	92	52.065	Cercocebus_atys
ENSAMXG00000010570	raver2	64	47.948	ENSCLAG00000006590	RAVER2	83	50.304	Chinchilla_lanigera
ENSAMXG00000010570	raver2	66	51.601	ENSCSAG00000001350	RAVER2	85	52.065	Chlorocebus_sabaeus
ENSAMXG00000010570	raver2	69	48.896	ENSCHOG00000007668	RAVER2	81	49.315	Choloepus_hoffmanni
ENSAMXG00000010570	raver2	73	57.279	ENSCPBG00000001015	RAVER2	86	48.521	Chrysemys_picta_bellii
ENSAMXG00000010570	raver2	69	49.916	ENSCANG00000042311	RAVER2	88	49.313	Colobus_angolensis_palliatus
ENSAMXG00000010570	raver2	67	50.678	ENSCGRG00001011852	Raver2	81	52.182	Cricetulus_griseus_chok1gshd
ENSAMXG00000010570	raver2	76	57.709	ENSCVAG00000002687	raver2	89	76.982	Cyprinodon_variegatus
ENSAMXG00000010570	raver2	100	78.040	ENSDARG00000075034	raver2	97	78.040	Danio_rerio
ENSAMXG00000010570	raver2	72	49.758	ENSDNOG00000012130	RAVER2	80	52.166	Dasypus_novemcinctus
ENSAMXG00000010570	raver2	67	52.151	ENSDORG00000002498	Raver2	76	52.531	Dipodomys_ordii
ENSAMXG00000010570	raver2	67	42.014	ENSETEG00000000706	RAVER2	88	42.207	Echinops_telfairi
ENSAMXG00000010570	raver2	70	51.338	ENSEASG00005008158	RAVER2	89	52.159	Equus_asinus_asinus
ENSAMXG00000010570	raver2	70	51.338	ENSECAG00000022014	RAVER2	89	52.159	Equus_caballus
ENSAMXG00000010570	raver2	54	82.857	ENSELUG00000022384	raver2	97	78.868	Esox_lucius
ENSAMXG00000010570	raver2	67	52.870	ENSFCAG00000022781	RAVER2	80	53.158	Felis_catus
ENSAMXG00000010570	raver2	70	45.274	ENSFALG00000012634	RAVER2	85	47.477	Ficedula_albicollis
ENSAMXG00000010570	raver2	67	46.060	ENSFDAG00000010721	RAVER2	84	48.571	Fukomys_damarensis
ENSAMXG00000010570	raver2	100	62.458	ENSFHEG00000001322	raver2	100	62.150	Fundulus_heteroclitus
ENSAMXG00000010570	raver2	58	78.243	ENSGMOG00000013535	raver2	77	78.243	Gadus_morhua
ENSAMXG00000010570	raver2	72	48.377	ENSGALG00000033759	RAVER2	71	50.000	Gallus_gallus
ENSAMXG00000010570	raver2	100	62.150	ENSGAFG00000008577	raver2	100	62.038	Gambusia_affinis
ENSAMXG00000010570	raver2	72	61.807	ENSGACG00000007122	raver2	99	62.205	Gasterosteus_aculeatus
ENSAMXG00000010570	raver2	78	57.908	ENSGAGG00000018767	RAVER2	95	47.793	Gopherus_agassizii
ENSAMXG00000010570	raver2	67	50.692	ENSGGOG00000016447	RAVER2	83	51.543	Gorilla_gorilla
ENSAMXG00000010570	raver2	100	62.639	ENSHBUG00000022983	raver2	100	61.683	Haplochromis_burtoni
ENSAMXG00000010570	raver2	74	46.203	ENSHGLG00000018409	RAVER2	83	49.647	Heterocephalus_glaber_female
ENSAMXG00000010570	raver2	69	45.439	ENSHGLG00100006640	RAVER2	99	58.046	Heterocephalus_glaber_male
ENSAMXG00000010570	raver2	100	58.757	ENSHCOG00000005933	raver2	100	57.671	Hippocampus_comes
ENSAMXG00000010570	raver2	100	79.122	ENSIPUG00000007082	raver2	100	79.122	Ictalurus_punctatus
ENSAMXG00000010570	raver2	70	50.415	ENSJJAG00000000374	Raver2	88	50.415	Jaculus_jaculus
ENSAMXG00000010570	raver2	77	57.370	ENSKMAG00000011656	raver2	100	57.101	Kryptolebias_marmoratus
ENSAMXG00000010570	raver2	89	45.897	ENSLACG00000005188	RAVER2	100	45.513	Latimeria_chalumnae
ENSAMXG00000010570	raver2	100	65.035	ENSLOCG00000006773	raver2	99	64.569	Lepisosteus_oculatus
ENSAMXG00000010570	raver2	63	51.654	ENSLAFG00000012508	RAVER2	85	52.134	Loxodonta_africana
ENSAMXG00000010570	raver2	67	52.091	ENSMFAG00000031436	RAVER2	84	50.933	Macaca_fascicularis
ENSAMXG00000010570	raver2	67	51.916	ENSMMUG00000018565	RAVER2	92	51.885	Macaca_mulatta
ENSAMXG00000010570	raver2	69	51.613	ENSMNEG00000033127	RAVER2	92	52.065	Macaca_nemestrina
ENSAMXG00000010570	raver2	63	50.370	ENSMLEG00000036310	RAVER2	85	50.841	Mandrillus_leucophaeus
ENSAMXG00000010570	raver2	100	62.528	ENSMZEG00005014386	raver2	100	61.641	Maylandia_zebra
ENSAMXG00000010570	raver2	68	46.758	ENSMGAG00000011806	RAVER2	84	48.785	Meleagris_gallopavo
ENSAMXG00000010570	raver2	67	50.423	ENSMAUG00000004248	Raver2	81	52.281	Mesocricetus_auratus
ENSAMXG00000010570	raver2	67	52.069	ENSMICG00000029259	RAVER2	79	52.105	Microcebus_murinus
ENSAMXG00000010570	raver2	67	48.644	ENSMOCG00000018087	Raver2	81	50.348	Microtus_ochrogaster
ENSAMXG00000010570	raver2	72	48.684	ENSMODG00000001242	RAVER2	81	48.454	Monodelphis_domestica
ENSAMXG00000010570	raver2	100	61.043	ENSMALG00000018093	raver2	96	60.802	Monopterus_albus
ENSAMXG00000010570	raver2	66	50.000	MGP_CAROLIEiJ_G0026202	Raver2	92	57.311	Mus_caroli
ENSAMXG00000010570	raver2	67	50.426	ENSMUSG00000035275	Raver2	92	57.547	Mus_musculus
ENSAMXG00000010570	raver2	66	50.433	MGP_PahariEiJ_G0028539	Raver2	92	57.210	Mus_pahari
ENSAMXG00000010570	raver2	66	50.868	MGP_SPRETEiJ_G0027171	Raver2	92	57.547	Mus_spretus
ENSAMXG00000010570	raver2	65	53.559	ENSMPUG00000000717	RAVER2	85	53.860	Mustela_putorius_furo
ENSAMXG00000010570	raver2	63	51.301	ENSMLUG00000007699	RAVER2	92	51.595	Myotis_lucifugus
ENSAMXG00000010570	raver2	69	50.084	ENSNGAG00000000905	Raver2	81	51.845	Nannospalax_galili
ENSAMXG00000010570	raver2	64	51.361	ENSNLEG00000015145	RAVER2	85	51.648	Nomascus_leucogenys
ENSAMXG00000010570	raver2	64	49.533	ENSODEG00000005253	RAVER2	84	49.719	Octodon_degus
ENSAMXG00000010570	raver2	88	51.872	ENSONIG00000008808	raver2	89	59.498	Oreochromis_niloticus
ENSAMXG00000010570	raver2	64	50.452	ENSOANG00000008327	-	88	50.452	Ornithorhynchus_anatinus
ENSAMXG00000010570	raver2	67	50.436	ENSOCUG00000006221	RAVER2	85	49.508	Oryctolagus_cuniculus
ENSAMXG00000010570	raver2	100	62.150	ENSORLG00000010073	raver2	100	61.857	Oryzias_latipes
ENSAMXG00000010570	raver2	100	61.969	ENSORLG00020010822	raver2	100	61.788	Oryzias_latipes_hni
ENSAMXG00000010570	raver2	100	61.735	ENSOMEG00000007789	raver2	100	61.899	Oryzias_melastigma
ENSAMXG00000010570	raver2	64	50.272	ENSOGAG00000011157	RAVER2	84	50.933	Otolemur_garnettii
ENSAMXG00000010570	raver2	67	51.986	ENSOARG00000010030	RAVER2	84	51.410	Ovis_aries
ENSAMXG00000010570	raver2	67	51.546	ENSPPAG00000039189	RAVER2	83	51.993	Pan_paniscus
ENSAMXG00000010570	raver2	67	52.870	ENSPPRG00000023350	RAVER2	80	53.158	Panthera_pardus
ENSAMXG00000010570	raver2	63	51.667	ENSPTIG00000009389	RAVER2	75	51.963	Panthera_tigris_altaica
ENSAMXG00000010570	raver2	67	50.862	ENSPTRG00000000824	RAVER2	85	51.130	Pan_troglodytes
ENSAMXG00000010570	raver2	69	50.767	ENSPANG00000003396	RAVER2	79	51.754	Papio_anubis
ENSAMXG00000010570	raver2	100	55.312	ENSPKIG00000019357	raver2	100	55.081	Paramormyrops_kingsleyae
ENSAMXG00000010570	raver2	57	53.779	ENSPSIG00000010074	RAVER2	69	53.779	Pelodiscus_sinensis
ENSAMXG00000010570	raver2	69	51.261	ENSPEMG00000001332	Raver2	81	51.903	Peromyscus_maniculatus_bairdii
ENSAMXG00000010570	raver2	72	50.814	ENSPCIG00000020336	RAVER2	84	50.825	Phascolarctos_cinereus
ENSAMXG00000010570	raver2	100	62.333	ENSPFOG00000009386	raver2	99	62.403	Poecilia_formosa
ENSAMXG00000010570	raver2	100	62.430	ENSPLAG00000005632	raver2	100	62.500	Poecilia_latipinna
ENSAMXG00000010570	raver2	100	62.249	ENSPMEG00000000509	raver2	100	62.277	Poecilia_mexicana
ENSAMXG00000010570	raver2	100	62.361	ENSPREG00000020514	raver2	100	62.612	Poecilia_reticulata
ENSAMXG00000010570	raver2	71	50.493	ENSPCOG00000028379	RAVER2	82	50.502	Propithecus_coquereli
ENSAMXG00000010570	raver2	63	51.017	ENSPVAG00000007172	RAVER2	85	51.119	Pteropus_vampyrus
ENSAMXG00000010570	raver2	77	90.701	ENSPNAG00000000962	raver2	100	90.701	Pygocentrus_nattereri
ENSAMXG00000010570	raver2	67	49.493	ENSRNOG00000023812	Raver2	81	52.265	Rattus_norvegicus
ENSAMXG00000010570	raver2	66	50.523	ENSRROG00000041867	RAVER2	77	52.072	Rhinopithecus_roxellana
ENSAMXG00000010570	raver2	65	50.530	ENSSBOG00000023706	RAVER2	85	50.802	Saimiri_boliviensis_boliviensis
ENSAMXG00000010570	raver2	68	49.233	ENSSHAG00000014568	RAVER2	90	49.476	Sarcophilus_harrisii
ENSAMXG00000010570	raver2	85	56.121	ENSSFOG00015013015	raver2	93	56.033	Scleropages_formosus
ENSAMXG00000010570	raver2	100	61.623	ENSSMAG00000020654	raver2	100	61.191	Scophthalmus_maximus
ENSAMXG00000010570	raver2	100	62.486	ENSSDUG00000013065	raver2	100	61.761	Seriola_dumerili
ENSAMXG00000010570	raver2	97	63.206	ENSSLDG00000002746	raver2	99	62.500	Seriola_lalandi_dorsalis
ENSAMXG00000010570	raver2	68	50.258	ENSSPUG00000016441	RAVER2	81	50.967	Sphenodon_punctatus
ENSAMXG00000010570	raver2	68	53.425	ENSSSCG00000025672	-	88	53.425	Sus_scrofa
ENSAMXG00000010570	raver2	64	49.101	ENSTGUG00000009973	RAVER2	91	49.267	Taeniopygia_guttata
ENSAMXG00000010570	raver2	73	72.936	ENSTRUG00000018541	raver2	95	85.714	Takifugu_rubripes
ENSAMXG00000010570	raver2	68	62.301	ENSTNIG00000018106	raver2	99	62.301	Tetraodon_nigroviridis
ENSAMXG00000010570	raver2	64	47.905	ENSTBEG00000009004	RAVER2	87	47.905	Tupaia_belangeri
ENSAMXG00000010570	raver2	53	61.392	ENSTTRG00000009692	RAVER2	63	61.392	Tursiops_truncatus
ENSAMXG00000010570	raver2	63	50.912	ENSUAMG00000007847	RAVER2	77	51.197	Ursus_americanus
ENSAMXG00000010570	raver2	63	51.009	ENSUMAG00000008489	RAVER2	79	51.296	Ursus_maritimus
ENSAMXG00000010570	raver2	65	53.488	ENSVVUG00000013993	RAVER2	85	53.694	Vulpes_vulpes
ENSAMXG00000010570	raver2	75	44.006	ENSXETG00000020406	raver2	89	43.622	Xenopus_tropicalis
ENSAMXG00000010570	raver2	100	62.612	ENSXMAG00000002206	raver2	100	62.346	Xiphophorus_maculatus