EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010681 (Gene tree)
Gene ID: 103036455
Gene Symbol: matr3l1.1 (1 of many)
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 17916 bases
Position: chr24:38111179-38129094
Accession: 103036455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010972	RRM_5	PF13893.6	5.1e-08	1	2
ENSAMXP00000010972	RRM_5	PF13893.6	5.1e-08	2	2
ENSAMXP00000010972	RRM_1	PF00076.22	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010972	-	5120	XM_022684056	ENSAMXP00000010972	1115 (aa)	XP_022539777	W5KTR0

Gene Model

Click here to download ENSAMXG00000010681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010681	matr3l1.1	96	80.513	ENSAMXG00000010685	matr3l1.1	99	80.684
ENSAMXG00000010681	matr3l1.1	51	43.137	ENSAMXG00000010682	-	57	43.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010681	matr3l1.1	52	46.914	ENSG00000015479	MATR3	98	39.759	Homo_sapiens
ENSAMXG00000010681	matr3l1.1	72	48.148	ENSAMEG00000011347	-	71	48.148	Ailuropoda_melanoleuca
ENSAMXG00000010681	matr3l1.1	90	41.912	ENSAPLG00000008118	-	67	62.500	Anas_platyrhynchos
ENSAMXG00000010681	matr3l1.1	84	62.500	ENSACAG00000016233	-	73	62.500	Anolis_carolinensis
ENSAMXG00000010681	matr3l1.1	89	46.835	ENSANAG00000022951	-	95	32.731	Aotus_nancymaae
ENSAMXG00000010681	matr3l1.1	68	42.321	ENSACLG00000015903	matr3l1.1	74	45.952	Astatotilapia_calliptera
ENSAMXG00000010681	matr3l1.1	67	33.585	ENSBTAG00000006756	MATR3	67	33.948	Bos_taurus
ENSAMXG00000010681	matr3l1.1	85	48.148	ENSCAFG00000001345	MATR3	75	48.148	Canis_familiaris
ENSAMXG00000010681	matr3l1.1	85	46.835	ENSCAFG00020010504	-	79	46.835	Canis_lupus_dingo
ENSAMXG00000010681	matr3l1.1	77	32.207	ENSCHIG00000025746	-	86	32.880	Capra_hircus
ENSAMXG00000010681	matr3l1.1	66	48.148	ENSTSYG00000011028	-	80	46.835	Carlito_syrichta
ENSAMXG00000010681	matr3l1.1	74	46.914	ENSCPOG00000014076	-	71	58.929	Cavia_porcellus
ENSAMXG00000010681	matr3l1.1	82	33.585	ENSCCAG00000025074	-	95	32.731	Cebus_capucinus
ENSAMXG00000010681	matr3l1.1	58	48.148	ENSCATG00000041304	-	95	33.937	Cercocebus_atys
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSCLAG00000015998	-	86	33.409	Chinchilla_lanigera
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSCSAG00000013075	-	86	33.634	Chlorocebus_sabaeus
ENSAMXG00000010681	matr3l1.1	84	64.286	ENSCPBG00000006303	-	75	64.286	Chrysemys_picta_bellii
ENSAMXG00000010681	matr3l1.1	61	48.148	ENSCANG00000028224	-	98	33.484	Colobus_angolensis_palliatus
ENSAMXG00000010681	matr3l1.1	52	46.914	ENSCGRG00001020227	Matr3	96	33.860	Cricetulus_griseus_chok1gshd
ENSAMXG00000010681	matr3l1.1	52	46.914	ENSCGRG00000011298	Matr3	86	33.860	Cricetulus_griseus_crigri
ENSAMXG00000010681	matr3l1.1	99	44.854	ENSCSEG00000012682	matr3l1.1	99	43.655	Cynoglossus_semilaevis
ENSAMXG00000010681	matr3l1.1	99	43.656	ENSCVAG00000005337	matr3l1.1	99	44.395	Cyprinodon_variegatus
ENSAMXG00000010681	matr3l1.1	89	49.383	ENSDNOG00000037723	-	68	49.383	Dasypus_novemcinctus
ENSAMXG00000010681	matr3l1.1	72	48.148	ENSEASG00005020857	-	86	33.034	Equus_asinus_asinus
ENSAMXG00000010681	matr3l1.1	72	48.148	ENSECAG00000012882	MATR3	86	33.483	Equus_caballus
ENSAMXG00000010681	matr3l1.1	89	41.975	ENSELUG00000021651	si:ch211-271b14.1	89	41.975	Esox_lucius
ENSAMXG00000010681	matr3l1.1	99	51.839	ENSELUG00000021848	matr3l1.1	99	51.416	Esox_lucius
ENSAMXG00000010681	matr3l1.1	72	48.148	ENSFCAG00000021911	-	79	48.148	Felis_catus
ENSAMXG00000010681	matr3l1.1	84	39.568	ENSFALG00000003071	-	85	40.000	Ficedula_albicollis
ENSAMXG00000010681	matr3l1.1	77	31.910	ENSFDAG00000017675	-	95	33.864	Fukomys_damarensis
ENSAMXG00000010681	matr3l1.1	90	41.429	ENSGALG00000002478	MATR3	74	42.647	Gallus_gallus
ENSAMXG00000010681	matr3l1.1	84	64.286	ENSGAGG00000011386	-	75	64.286	Gopherus_agassizii
ENSAMXG00000010681	matr3l1.1	89	48.148	ENSGGOG00000007308	-	97	33.634	Gorilla_gorilla
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSHGLG00000004673	MATR3	95	33.409	Heterocephalus_glaber_female
ENSAMXG00000010681	matr3l1.1	50	48.148	ENSHGLG00100006442	-	86	33.409	Heterocephalus_glaber_male
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSSTOG00000014746	-	77	48.148	Ictidomys_tridecemlineatus
ENSAMXG00000010681	matr3l1.1	72	58.929	ENSJJAG00000021710	-	71	58.929	Jaculus_jaculus
ENSAMXG00000010681	matr3l1.1	82	48.276	ENSLACG00000006743	-	82	48.276	Latimeria_chalumnae
ENSAMXG00000010681	matr3l1.1	58	48.148	ENSMFAG00000000634	-	95	33.634	Macaca_fascicularis
ENSAMXG00000010681	matr3l1.1	58	48.148	ENSMMUG00000016741	MATR3	95	33.634	Macaca_mulatta
ENSAMXG00000010681	matr3l1.1	57	38.333	ENSMMUG00000015963	-	98	38.333	Macaca_mulatta
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSMNEG00000042856	-	96	33.484	Macaca_nemestrina
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSMLEG00000041178	-	96	33.484	Mandrillus_leucophaeus
ENSAMXG00000010681	matr3l1.1	90	42.254	ENSMGAG00000001331	-	65	64.286	Meleagris_gallopavo
ENSAMXG00000010681	matr3l1.1	71	55.556	ENSMAUG00000011647	Matr3	86	33.032	Mesocricetus_auratus
ENSAMXG00000010681	matr3l1.1	59	46.835	ENSMICG00000012438	-	98	32.880	Microcebus_murinus
ENSAMXG00000010681	matr3l1.1	71	58.929	ENSMOCG00000015711	Matr3	74	58.929	Microtus_ochrogaster
ENSAMXG00000010681	matr3l1.1	72	58.929	ENSMODG00000011925	-	73	58.929	Monodelphis_domestica
ENSAMXG00000010681	matr3l1.1	77	34.132	MGP_CAROLIEiJ_G0022108	Matr3	95	33.484	Mus_caroli
ENSAMXG00000010681	matr3l1.1	77	34.132	ENSMUSG00000037236	Matr3	86	33.484	Mus_musculus
ENSAMXG00000010681	matr3l1.1	77	34.132	MGP_PahariEiJ_G0018842	Matr3	95	32.506	Mus_pahari
ENSAMXG00000010681	matr3l1.1	77	34.132	MGP_SPRETEiJ_G0023020	Matr3	95	33.484	Mus_spretus
ENSAMXG00000010681	matr3l1.1	85	48.148	ENSMPUG00000009297	-	73	48.148	Mustela_putorius_furo
ENSAMXG00000010681	matr3l1.1	73	46.914	ENSMLUG00000005798	-	85	33.108	Myotis_lucifugus
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSNGAG00000017452	Matr3	95	31.264	Nannospalax_galili
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSNLEG00000009093	-	97	33.634	Nomascus_leucogenys
ENSAMXG00000010681	matr3l1.1	74	46.914	ENSOPRG00000016511	-	69	46.914	Ochotona_princeps
ENSAMXG00000010681	matr3l1.1	65	34.921	ENSODEG00000003015	-	95	34.086	Octodon_degus
ENSAMXG00000010681	matr3l1.1	77	34.940	ENSOCUG00000026311	MATR3	86	33.183	Oryctolagus_cuniculus
ENSAMXG00000010681	matr3l1.1	69	43.899	ENSORLG00000025674	matr3l1.1	99	44.377	Oryzias_latipes
ENSAMXG00000010681	matr3l1.1	99	45.487	ENSORLG00020009362	matr3l1.1	99	45.877	Oryzias_latipes_hni
ENSAMXG00000010681	matr3l1.1	99	45.326	ENSORLG00015018551	matr3l1.1	99	45.637	Oryzias_latipes_hsok
ENSAMXG00000010681	matr3l1.1	81	47.835	ENSOMEG00000022287	matr3l1.1	99	45.709	Oryzias_melastigma
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSOGAG00000010607	-	86	33.634	Otolemur_garnettii
ENSAMXG00000010681	matr3l1.1	77	31.920	ENSOARG00000016931	-	85	32.584	Ovis_aries
ENSAMXG00000010681	matr3l1.1	62	31.455	ENSPPAG00000026720	-	97	32.706	Pan_paniscus
ENSAMXG00000010681	matr3l1.1	89	48.148	ENSPPAG00000001418	-	97	33.634	Pan_paniscus
ENSAMXG00000010681	matr3l1.1	72	48.148	ENSPPRG00000008004	-	79	48.148	Panthera_pardus
ENSAMXG00000010681	matr3l1.1	72	48.148	ENSPTIG00000010711	-	90	32.809	Panthera_tigris_altaica
ENSAMXG00000010681	matr3l1.1	89	48.148	ENSPTRG00000017294	MATR3	95	33.634	Pan_troglodytes
ENSAMXG00000010681	matr3l1.1	59	48.148	ENSPANG00000032489	-	97	33.409	Papio_anubis
ENSAMXG00000010681	matr3l1.1	61	48.148	ENSPANG00000012018	-	96	33.484	Papio_anubis
ENSAMXG00000010681	matr3l1.1	99	51.310	ENSPKIG00000000333	matr3l1.1	100	50.934	Paramormyrops_kingsleyae
ENSAMXG00000010681	matr3l1.1	90	40.714	ENSPSIG00000014598	-	80	40.714	Pelodiscus_sinensis
ENSAMXG00000010681	matr3l1.1	77	34.766	ENSPEMG00000020679	Matr3	86	33.183	Peromyscus_maniculatus_bairdii
ENSAMXG00000010681	matr3l1.1	77	33.840	ENSPCOG00000025718	-	95	33.183	Propithecus_coquereli
ENSAMXG00000010681	matr3l1.1	89	47.368	ENSPVAG00000015431	-	69	47.368	Pteropus_vampyrus
ENSAMXG00000010681	matr3l1.1	50	44.643	ENSPNYG00000015855	-	98	45.910	Pundamilia_nyererei
ENSAMXG00000010681	matr3l1.1	77	32.135	ENSRNOG00000019875	Matr3	86	34.783	Rattus_norvegicus
ENSAMXG00000010681	matr3l1.1	58	48.148	ENSRBIG00000034713	-	95	33.634	Rhinopithecus_bieti
ENSAMXG00000010681	matr3l1.1	60	48.148	ENSRROG00000039415	-	95	33.634	Rhinopithecus_roxellana
ENSAMXG00000010681	matr3l1.1	77	31.151	ENSRROG00000043949	-	95	33.183	Rhinopithecus_roxellana
ENSAMXG00000010681	matr3l1.1	89	46.835	ENSSBOG00000030159	-	95	32.731	Saimiri_boliviensis_boliviensis
ENSAMXG00000010681	matr3l1.1	50	60.714	ENSSHAG00000010331	-	85	31.333	Sarcophilus_harrisii
ENSAMXG00000010681	matr3l1.1	87	43.284	ENSSPUG00000019236	-	75	43.284	Sphenodon_punctatus
ENSAMXG00000010681	matr3l1.1	73	48.148	ENSSSCG00000014343	-	77	48.148	Sus_scrofa
ENSAMXG00000010681	matr3l1.1	85	39.333	ENSTGUG00000014568	MATR3	94	40.845	Taeniopygia_guttata
ENSAMXG00000010681	matr3l1.1	61	43.079	ENSTRUG00000001692	-	89	40.523	Takifugu_rubripes
ENSAMXG00000010681	matr3l1.1	84	47.872	ENSTNIG00000003166	matr3l1.1	98	48.969	Tetraodon_nigroviridis
ENSAMXG00000010681	matr3l1.1	65	34.524	ENSUAMG00000000097	-	76	33.948	Ursus_americanus
ENSAMXG00000010681	matr3l1.1	85	48.148	ENSUMAG00000015808	-	74	48.148	Ursus_maritimus
ENSAMXG00000010681	matr3l1.1	85	58.929	ENSVPAG00000006337	-	68	58.929	Vicugna_pacos
ENSAMXG00000010681	matr3l1.1	74	48.148	ENSVVUG00000020287	-	80	48.148	Vulpes_vulpes
ENSAMXG00000010681	matr3l1.1	85	55.556	ENSXETG00000003838	matr3	82	54.412	Xenopus_tropicalis
ENSAMXG00000010681	matr3l1.1	72	47.283	ENSXMAG00000014107	-	81	47.692	Xiphophorus_maculatus