EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000010682 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
21327 bases
Position
chr24:38089231-38110557
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000010973zf-metPF12874.71.9e-0711
ENSAMXP00000030176zf-metPF12874.71.9e-0711
ENSAMXP00000045653RRM_5PF13893.66e-0912
ENSAMXP00000045653RRM_5PF13893.66e-0922
ENSAMXP00000010973RRM_5PF13893.61.9e-0811
ENSAMXP00000030176RRM_5PF13893.61.9e-0811
ENSAMXP00000045653RRM_1PF00076.222e-1111
ENSAMXP00000010973RRM_1PF00076.226.4e-1111
ENSAMXP00000030176RRM_1PF00076.226.4e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000045828-6500-ENSAMXP00000045653943 (aa)--
ENSAMXT00000010973-4260-ENSAMXP000000109731304 (aa)-W5KTR1
ENSAMXT00000039708-7590-ENSAMXP000000301761304 (aa)--
Gene Model
Click here to download ENSAMXG00000010682's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010682's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000010682-5743.137ENSAMXG00000010681matr3l1.15143.137
ENSAMXG00000010682-5742.222ENSAMXG00000010685matr3l1.16443.137
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000010682-7669.048ENSCVAG00000005349-5149.254Cyprinodon_variegatus
ENSAMXG00000010682-6248.235ENSONIG00000004400-6849.254Oreochromis_niloticus
ENSAMXG00000010682-6951.724ENSORLG00000023325-5151.667Oryzias_latipes
ENSAMXG00000010682-7153.448ENSORLG00020009274-5353.333Oryzias_latipes_hni

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