EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010685 (Gene tree)
Gene ID: -
Gene Symbol: matr3l1.1 (1 of many)
Alias: -
Full Name: matrin 3-like 1.1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10861 bases
Position: chr24:38077378-38088238
Accession: ZDB-GENE-030616-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010981	RRM_1	PF00076.22	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000010981	-	5565	-	ENSAMXP00000010981	1029 (aa)	-	W5KTR9

Gene Model

Click here to download ENSAMXG00000010685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010685	matr3l1.1	64	43.137	ENSAMXG00000010682	-	57	42.222
ENSAMXG00000010685	matr3l1.1	99	80.684	ENSAMXG00000010681	matr3l1.1	96	80.513

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSG00000015479	MATR3	98	38.017	Homo_sapiens
ENSAMXG00000010685	matr3l1.1	81	39.706	ENSAMEG00000011347	-	82	37.795	Ailuropoda_melanoleuca
ENSAMXG00000010685	matr3l1.1	86	39.706	ENSAPLG00000008118	-	77	35.878	Anas_platyrhynchos
ENSAMXG00000010685	matr3l1.1	87	40.690	ENSACAG00000016233	-	73	39.286	Anolis_carolinensis
ENSAMXG00000010685	matr3l1.1	59	31.707	ENSANAG00000024654	-	71	31.707	Aotus_nancymaae
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSANAG00000022951	-	81	38.095	Aotus_nancymaae
ENSAMXG00000010685	matr3l1.1	64	46.296	ENSACLG00000015903	matr3l1.1	88	43.293	Astatotilapia_calliptera
ENSAMXG00000010685	matr3l1.1	81	40.441	ENSCJAG00000006888	-	85	33.663	Callithrix_jacchus
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSCAFG00000001345	MATR3	85	30.222	Canis_familiaris
ENSAMXG00000010685	matr3l1.1	82	38.514	ENSCAFG00020010504	-	94	30.000	Canis_lupus_dingo
ENSAMXG00000010685	matr3l1.1	81	39.706	ENSTSYG00000011028	-	85	33.663	Carlito_syrichta
ENSAMXG00000010685	matr3l1.1	86	30.886	ENSCPOG00000014076	-	94	30.134	Cavia_porcellus
ENSAMXG00000010685	matr3l1.1	81	39.706	ENSCCAG00000025074	-	84	33.663	Cebus_capucinus
ENSAMXG00000010685	matr3l1.1	63	39.706	ENSCATG00000041304	-	94	30.180	Cercocebus_atys
ENSAMXG00000010685	matr3l1.1	86	30.886	ENSCLAG00000015998	-	85	30.023	Chinchilla_lanigera
ENSAMXG00000010685	matr3l1.1	85	40.441	ENSCPBG00000006303	-	74	38.583	Chrysemys_picta_bellii
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSCANG00000028224	-	81	38.095	Colobus_angolensis_palliatus
ENSAMXG00000010685	matr3l1.1	86	30.088	ENSCGRG00001020227	Matr3	95	30.474	Cricetulus_griseus_chok1gshd
ENSAMXG00000010685	matr3l1.1	86	30.088	ENSCGRG00000011298	Matr3	85	30.474	Cricetulus_griseus_crigri
ENSAMXG00000010685	matr3l1.1	99	44.162	ENSCSEG00000012682	matr3l1.1	98	48.418	Cynoglossus_semilaevis
ENSAMXG00000010685	matr3l1.1	99	42.525	ENSCVAG00000005337	matr3l1.1	99	43.868	Cyprinodon_variegatus
ENSAMXG00000010685	matr3l1.1	80	39.706	ENSDNOG00000037723	-	72	38.220	Dasypus_novemcinctus
ENSAMXG00000010685	matr3l1.1	72	64.444	ENSELUG00000021651	si:ch211-271b14.1	84	64.444	Esox_lucius
ENSAMXG00000010685	matr3l1.1	99	59.341	ENSELUG00000021848	matr3l1.1	95	54.959	Esox_lucius
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSFCAG00000021911	-	67	38.095	Felis_catus
ENSAMXG00000010685	matr3l1.1	74	39.706	ENSFALG00000003071	-	72	37.895	Ficedula_albicollis
ENSAMXG00000010685	matr3l1.1	85	30.580	ENSFDAG00000017675	-	94	30.664	Fukomys_damarensis
ENSAMXG00000010685	matr3l1.1	90	38.571	ENSGALG00000002478	MATR3	73	36.641	Gallus_gallus
ENSAMXG00000010685	matr3l1.1	85	38.971	ENSGAGG00000011386	-	74	37.008	Gopherus_agassizii
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSGGOG00000007308	-	81	38.095	Gorilla_gorilla
ENSAMXG00000010685	matr3l1.1	62	38.095	ENSHGLG00100006442	-	86	33.663	Heterocephalus_glaber_male
ENSAMXG00000010685	matr3l1.1	70	55.769	ENSIPUG00000020686	MATR3	88	54.167	Ictalurus_punctatus
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSJJAG00000021710	-	94	30.112	Jaculus_jaculus
ENSAMXG00000010685	matr3l1.1	83	52.144	ENSLBEG00000018267	matr3l1.1	94	49.503	Labrus_bergylta
ENSAMXG00000010685	matr3l1.1	79	45.283	ENSLACG00000006743	-	86	44.792	Latimeria_chalumnae
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSMFAG00000000634	-	81	38.095	Macaca_fascicularis
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSMMUG00000016741	MATR3	81	38.095	Macaca_mulatta
ENSAMXG00000010685	matr3l1.1	64	38.095	ENSMMUG00000015963	-	98	38.095	Macaca_mulatta
ENSAMXG00000010685	matr3l1.1	85	39.706	ENSMNEG00000042856	-	81	38.095	Macaca_nemestrina
ENSAMXG00000010685	matr3l1.1	85	39.706	ENSMLEG00000041178	-	81	38.095	Mandrillus_leucophaeus
ENSAMXG00000010685	matr3l1.1	76	58.555	ENSMAMG00000013840	matr3l1.1	98	53.760	Mastacembelus_armatus
ENSAMXG00000010685	matr3l1.1	90	39.706	ENSMGAG00000001331	-	78	37.795	Meleagris_gallopavo
ENSAMXG00000010685	matr3l1.1	86	30.155	ENSMAUG00000011647	Matr3	85	30.317	Mesocricetus_auratus
ENSAMXG00000010685	matr3l1.1	51	38.624	ENSMICG00000012438	-	97	30.176	Microcebus_murinus
ENSAMXG00000010685	matr3l1.1	72	35.714	ENSMOCG00000017661	Zfp638	51	35.714	Microtus_ochrogaster
ENSAMXG00000010685	matr3l1.1	86	30.088	ENSMOCG00000015711	Matr3	94	30.474	Microtus_ochrogaster
ENSAMXG00000010685	matr3l1.1	86	31.330	ENSMODG00000011925	-	84	30.839	Monodelphis_domestica
ENSAMXG00000010685	matr3l1.1	86	30.377	MGP_CAROLIEiJ_G0022108	Matr3	94	30.317	Mus_caroli
ENSAMXG00000010685	matr3l1.1	86	30.377	ENSMUSG00000037236	Matr3	85	30.317	Mus_musculus
ENSAMXG00000010685	matr3l1.1	84	38.095	MGP_PahariEiJ_G0018842	Matr3	86	33.663	Mus_pahari
ENSAMXG00000010685	matr3l1.1	86	30.377	MGP_SPRETEiJ_G0023020	Matr3	94	30.649	Mus_spretus
ENSAMXG00000010685	matr3l1.1	82	38.667	ENSMPUG00000009297	-	76	38.095	Mustela_putorius_furo
ENSAMXG00000010685	matr3l1.1	81	39.706	ENSNLEG00000009093	-	74	38.095	Nomascus_leucogenys
ENSAMXG00000010685	matr3l1.1	81	41.912	ENSOPRG00000016511	-	84	40.157	Ochotona_princeps
ENSAMXG00000010685	matr3l1.1	66	42.857	ENSORLG00000025674	matr3l1.1	99	43.392	Oryzias_latipes
ENSAMXG00000010685	matr3l1.1	99	44.651	ENSORLG00020009362	matr3l1.1	99	45.770	Oryzias_latipes_hni
ENSAMXG00000010685	matr3l1.1	99	44.794	ENSORLG00015018551	matr3l1.1	99	45.422	Oryzias_latipes_hsok
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSPPAG00000001418	-	81	38.095	Pan_paniscus
ENSAMXG00000010685	matr3l1.1	69	31.207	ENSPPAG00000026720	-	95	30.465	Pan_paniscus
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSPPRG00000008004	-	67	38.095	Panthera_pardus
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSPTRG00000017294	MATR3	81	38.095	Pan_troglodytes
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSPANG00000012018	-	81	38.095	Papio_anubis
ENSAMXG00000010685	matr3l1.1	99	56.308	ENSPKIG00000000333	matr3l1.1	96	52.411	Paramormyrops_kingsleyae
ENSAMXG00000010685	matr3l1.1	85	38.235	ENSPSIG00000014598	-	72	36.220	Pelodiscus_sinensis
ENSAMXG00000010685	matr3l1.1	86	30.310	ENSPEMG00000020679	Matr3	85	30.248	Peromyscus_maniculatus_bairdii
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSPPYG00000015835	-	81	38.095	Pongo_abelii
ENSAMXG00000010685	matr3l1.1	86	31.102	ENSPCOG00000025718	-	85	33.663	Propithecus_coquereli
ENSAMXG00000010685	matr3l1.1	86	38.931	ENSPVAG00000015431	-	80	37.795	Pteropus_vampyrus
ENSAMXG00000010685	matr3l1.1	53	45.845	ENSPNYG00000015855	-	99	47.059	Pundamilia_nyererei
ENSAMXG00000010685	matr3l1.1	86	30.973	ENSRNOG00000019875	Matr3	85	30.248	Rattus_norvegicus
ENSAMXG00000010685	matr3l1.1	84	39.706	ENSRROG00000039415	-	86	33.663	Rhinopithecus_roxellana
ENSAMXG00000010685	matr3l1.1	84	39.552	ENSSBOG00000030159	-	81	38.583	Saimiri_boliviensis_boliviensis
ENSAMXG00000010685	matr3l1.1	86	31.330	ENSSHAG00000010331	-	84	30.839	Sarcophilus_harrisii
ENSAMXG00000010685	matr3l1.1	53	54.331	ENSSFOG00015001838	-	88	54.450	Scleropages_formosus
ENSAMXG00000010685	matr3l1.1	95	57.671	ENSSDUG00000015369	matr3l1.1	99	53.947	Seriola_dumerili
ENSAMXG00000010685	matr3l1.1	78	37.569	ENSSPUG00000019236	-	75	35.099	Sphenodon_punctatus
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSSSCG00000014343	-	84	36.879	Sus_scrofa
ENSAMXG00000010685	matr3l1.1	73	37.895	ENSTGUG00000014568	MATR3	77	35.659	Taeniopygia_guttata
ENSAMXG00000010685	matr3l1.1	84	48.223	ENSTNIG00000003166	matr3l1.1	98	48.223	Tetraodon_nigroviridis
ENSAMXG00000010685	matr3l1.1	81	40.667	ENSUMAG00000015808	-	84	39.007	Ursus_maritimus
ENSAMXG00000010685	matr3l1.1	79	38.971	ENSVPAG00000006337	-	70	38.095	Vicugna_pacos
ENSAMXG00000010685	matr3l1.1	84	38.095	ENSVVUG00000020287	-	94	30.000	Vulpes_vulpes
ENSAMXG00000010685	matr3l1.1	81	41.489	ENSXETG00000003838	matr3	71	38.624	Xenopus_tropicalis
ENSAMXG00000010685	matr3l1.1	81	38.208	ENSXMAG00000014107	-	90	36.937	Xiphophorus_maculatus