EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010871 (Gene tree)
Gene ID: 103040903
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: uncharacterized LOC103040903
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10523 bases
Position: chr25:24495777-24506299
Accession: 103040903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011172	RRM_1	PF00076.22	8.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011172	-	1869	XM_007236408	ENSAMXP00000011172	622 (aa)	XP_007236470	W5KUB0

Gene Model

Click here to download ENSAMXG00000010871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010871	si:dkey-33c12.4	64	34.406	ENSAMXG00000041967	zgc:123010	66	33.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010871	si:dkey-33c12.4	64	34.146	ENSAPOG00000019633	zgc:123010	68	32.439	Acanthochromis_polyacanthus
ENSAMXG00000010871	si:dkey-33c12.4	63	44.248	ENSAPOG00000022403	-	78	42.967	Acanthochromis_polyacanthus
ENSAMXG00000010871	si:dkey-33c12.4	99	38.681	ENSAPOG00000005058	si:dkey-33c12.4	97	39.788	Acanthochromis_polyacanthus
ENSAMXG00000010871	si:dkey-33c12.4	63	33.995	ENSACIG00000021684	zgc:123010	79	35.838	Amphilophus_citrinellus
ENSAMXG00000010871	si:dkey-33c12.4	63	44.866	ENSAOCG00000000431	-	78	43.160	Amphiprion_ocellaris
ENSAMXG00000010871	si:dkey-33c12.4	64	34.146	ENSAOCG00000005910	zgc:123010	68	32.439	Amphiprion_ocellaris
ENSAMXG00000010871	si:dkey-33c12.4	55	46.832	ENSAOCG00000020066	si:dkey-33c12.4	95	37.809	Amphiprion_ocellaris
ENSAMXG00000010871	si:dkey-33c12.4	63	44.201	ENSAPEG00000023603	-	78	42.557	Amphiprion_percula
ENSAMXG00000010871	si:dkey-33c12.4	64	34.146	ENSAPEG00000014305	zgc:123010	72	32.439	Amphiprion_percula
ENSAMXG00000010871	si:dkey-33c12.4	64	33.094	ENSATEG00000022160	-	94	31.743	Anabas_testudineus
ENSAMXG00000010871	si:dkey-33c12.4	65	35.024	ENSATEG00000001220	zgc:123010	69	34.058	Anabas_testudineus
ENSAMXG00000010871	si:dkey-33c12.4	59	48.995	ENSATEG00000018302	-	75	45.851	Anabas_testudineus
ENSAMXG00000010871	si:dkey-33c12.4	64	44.573	ENSATEG00000018885	si:dkey-33c12.4	96	40.465	Anabas_testudineus
ENSAMXG00000010871	si:dkey-33c12.4	71	31.897	ENSACLG00000010188	zgc:123010	71	32.779	Astatotilapia_calliptera
ENSAMXG00000010871	si:dkey-33c12.4	56	45.178	ENSACLG00000014192	si:dkey-33c12.4	90	37.910	Astatotilapia_calliptera
ENSAMXG00000010871	si:dkey-33c12.4	59	47.596	ENSACLG00000003019	-	79	43.687	Astatotilapia_calliptera
ENSAMXG00000010871	si:dkey-33c12.4	90	34.725	ENSCPBG00000024454	-	82	34.375	Chrysemys_picta_bellii
ENSAMXG00000010871	si:dkey-33c12.4	73	40.462	ENSCSEG00000002755	-	83	38.966	Cynoglossus_semilaevis
ENSAMXG00000010871	si:dkey-33c12.4	70	39.831	ENSCVAG00000006564	-	96	38.462	Cyprinodon_variegatus
ENSAMXG00000010871	si:dkey-33c12.4	58	46.973	ENSCVAG00000004187	-	77	42.945	Cyprinodon_variegatus
ENSAMXG00000010871	si:dkey-33c12.4	64	34.211	ENSCVAG00000013288	zgc:123010	68	33.254	Cyprinodon_variegatus
ENSAMXG00000010871	si:dkey-33c12.4	99	54.037	ENSDARG00000057890	si:dkey-33c12.4	99	54.914	Danio_rerio
ENSAMXG00000010871	si:dkey-33c12.4	64	33.333	ENSDARG00000039082	zgc:123010	71	32.250	Danio_rerio
ENSAMXG00000010871	si:dkey-33c12.4	55	34.604	ENSEBUG00000001368	-	54	33.721	Eptatretus_burgeri
ENSAMXG00000010871	si:dkey-33c12.4	99	43.047	ENSELUG00000002009	si:dkey-33c12.4	99	45.063	Esox_lucius
ENSAMXG00000010871	si:dkey-33c12.4	86	41.237	ENSELUG00000001633	-	88	41.379	Esox_lucius
ENSAMXG00000010871	si:dkey-33c12.4	64	34.550	ENSELUG00000022008	zgc:123010	81	33.780	Esox_lucius
ENSAMXG00000010871	si:dkey-33c12.4	76	31.340	ENSELUG00000021447	-	86	30.943	Esox_lucius
ENSAMXG00000010871	si:dkey-33c12.4	64	33.496	ENSFHEG00000002306	zgc:123010	68	32.518	Fundulus_heteroclitus
ENSAMXG00000010871	si:dkey-33c12.4	56	49.211	ENSFHEG00000009983	-	73	45.455	Fundulus_heteroclitus
ENSAMXG00000010871	si:dkey-33c12.4	56	46.032	ENSFHEG00000005521	si:dkey-33c12.4	96	37.178	Fundulus_heteroclitus
ENSAMXG00000010871	si:dkey-33c12.4	65	31.175	ENSGMOG00000018473	zgc:123010	96	30.935	Gadus_morhua
ENSAMXG00000010871	si:dkey-33c12.4	72	32.009	ENSGALG00000036747	TTC31	82	30.905	Gallus_gallus
ENSAMXG00000010871	si:dkey-33c12.4	64	45.351	ENSGAFG00000016594	-	78	42.466	Gambusia_affinis
ENSAMXG00000010871	si:dkey-33c12.4	55	43.968	ENSGAFG00000017596	si:dkey-33c12.4	96	35.693	Gambusia_affinis
ENSAMXG00000010871	si:dkey-33c12.4	64	34.709	ENSGAFG00000009373	zgc:123010	68	33.495	Gambusia_affinis
ENSAMXG00000010871	si:dkey-33c12.4	65	33.575	ENSGACG00000007620	zgc:123010	95	32.850	Gasterosteus_aculeatus
ENSAMXG00000010871	si:dkey-33c12.4	52	48.308	ENSGACG00000004936	-	91	48.308	Gasterosteus_aculeatus
ENSAMXG00000010871	si:dkey-33c12.4	56	45.547	ENSHBUG00000010735	si:dkey-33c12.4	96	37.407	Haplochromis_burtoni
ENSAMXG00000010871	si:dkey-33c12.4	99	63.622	ENSIPUG00000005998	si:dkey-33c12.4	99	63.823	Ictalurus_punctatus
ENSAMXG00000010871	si:dkey-33c12.4	64	34.878	ENSKMAG00000021350	zgc:123010	68	33.171	Kryptolebias_marmoratus
ENSAMXG00000010871	si:dkey-33c12.4	98	37.500	ENSKMAG00000016610	si:dkey-33c12.4	96	37.615	Kryptolebias_marmoratus
ENSAMXG00000010871	si:dkey-33c12.4	62	47.170	ENSKMAG00000006468	-	74	45.376	Kryptolebias_marmoratus
ENSAMXG00000010871	si:dkey-33c12.4	66	43.261	ENSLBEG00000028046	-	78	40.812	Labrus_bergylta
ENSAMXG00000010871	si:dkey-33c12.4	60	42.786	ENSLBEG00000021088	-	97	37.444	Labrus_bergylta
ENSAMXG00000010871	si:dkey-33c12.4	64	35.366	ENSLBEG00000023984	zgc:123010	68	34.390	Labrus_bergylta
ENSAMXG00000010871	si:dkey-33c12.4	53	42.978	ENSLBEG00000017203	-	98	37.724	Labrus_bergylta
ENSAMXG00000010871	si:dkey-33c12.4	89	37.997	ENSLACG00000004602	-	94	39.818	Latimeria_chalumnae
ENSAMXG00000010871	si:dkey-33c12.4	63	33.915	ENSLACG00000009001	zgc:123010	99	31.250	Latimeria_chalumnae
ENSAMXG00000010871	si:dkey-33c12.4	64	32.933	ENSLOCG00000008967	zgc:123010	84	31.365	Lepisosteus_oculatus
ENSAMXG00000010871	si:dkey-33c12.4	86	45.550	ENSLOCG00000001861	-	85	46.099	Lepisosteus_oculatus
ENSAMXG00000010871	si:dkey-33c12.4	57	33.148	ENSMAMG00000003439	-	90	33.148	Mastacembelus_armatus
ENSAMXG00000010871	si:dkey-33c12.4	57	32.964	ENSMAMG00000003394	-	90	32.964	Mastacembelus_armatus
ENSAMXG00000010871	si:dkey-33c12.4	60	32.383	ENSMAMG00000002460	-	70	35.110	Mastacembelus_armatus
ENSAMXG00000010871	si:dkey-33c12.4	78	40.374	ENSMAMG00000004311	-	76	41.701	Mastacembelus_armatus
ENSAMXG00000010871	si:dkey-33c12.4	63	32.117	ENSMAMG00000001145	zgc:123010	83	31.144	Mastacembelus_armatus
ENSAMXG00000010871	si:dkey-33c12.4	98	39.117	ENSMAMG00000000111	si:dkey-33c12.4	96	39.032	Mastacembelus_armatus
ENSAMXG00000010871	si:dkey-33c12.4	71	30.152	ENSMZEG00005014740	-	90	30.861	Maylandia_zebra
ENSAMXG00000010871	si:dkey-33c12.4	71	31.897	ENSMZEG00005027733	zgc:123010	71	32.779	Maylandia_zebra
ENSAMXG00000010871	si:dkey-33c12.4	56	45.431	ENSMZEG00005014276	si:dkey-33c12.4	96	37.351	Maylandia_zebra
ENSAMXG00000010871	si:dkey-33c12.4	59	47.962	ENSMZEG00005000585	-	79	43.662	Maylandia_zebra
ENSAMXG00000010871	si:dkey-33c12.4	57	31.389	ENSMMOG00000017955	-	85	30.673	Mola_mola
ENSAMXG00000010871	si:dkey-33c12.4	59	47.700	ENSMALG00000003167	-	76	42.775	Monopterus_albus
ENSAMXG00000010871	si:dkey-33c12.4	65	35.507	ENSMALG00000017698	zgc:123010	69	35.024	Monopterus_albus
ENSAMXG00000010871	si:dkey-33c12.4	98	38.240	ENSMALG00000002265	si:dkey-33c12.4	96	38.931	Monopterus_albus
ENSAMXG00000010871	si:dkey-33c12.4	65	31.415	ENSNBRG00000021157	zgc:123010	64	34.169	Neolamprologus_brichardi
ENSAMXG00000010871	si:dkey-33c12.4	71	31.343	ENSONIG00000018353	zgc:123010	74	31.591	Oreochromis_niloticus
ENSAMXG00000010871	si:dkey-33c12.4	53	48.936	ENSONIG00000012263	-	98	48.094	Oreochromis_niloticus
ENSAMXG00000010871	si:dkey-33c12.4	68	44.864	ENSONIG00000007538	-	92	54.909	Oreochromis_niloticus
ENSAMXG00000010871	si:dkey-33c12.4	82	40.142	ENSORLG00000030385	-	72	42.060	Oryzias_latipes
ENSAMXG00000010871	si:dkey-33c12.4	56	42.049	ENSORLG00000029651	si:dkey-33c12.4	97	34.769	Oryzias_latipes
ENSAMXG00000010871	si:dkey-33c12.4	98	35.110	ENSORLG00020008750	si:dkey-33c12.4	87	34.006	Oryzias_latipes_hni
ENSAMXG00000010871	si:dkey-33c12.4	82	40.885	ENSORLG00015008400	-	73	42.521	Oryzias_latipes_hsok
ENSAMXG00000010871	si:dkey-33c12.4	55	35.043	ENSORLG00015008373	zgc:123010	62	34.473	Oryzias_latipes_hsok
ENSAMXG00000010871	si:dkey-33c12.4	99	34.064	ENSOMEG00000008913	-	53	45.143	Oryzias_melastigma
ENSAMXG00000010871	si:dkey-33c12.4	82	41.166	ENSOMEG00000009428	-	73	42.887	Oryzias_melastigma
ENSAMXG00000010871	si:dkey-33c12.4	60	33.075	ENSOMEG00000003408	zgc:123010	68	32.108	Oryzias_melastigma
ENSAMXG00000010871	si:dkey-33c12.4	90	47.469	ENSPKIG00000011819	-	84	47.321	Paramormyrops_kingsleyae
ENSAMXG00000010871	si:dkey-33c12.4	75	30.353	ENSPKIG00000015521	zgc:123010	93	30.346	Paramormyrops_kingsleyae
ENSAMXG00000010871	si:dkey-33c12.4	52	43.396	ENSPMGG00000020251	zgc:123010	73	40.367	Periophthalmus_magnuspinnatus
ENSAMXG00000010871	si:dkey-33c12.4	60	47.607	ENSPFOG00000017092	-	95	44.325	Poecilia_formosa
ENSAMXG00000010871	si:dkey-33c12.4	71	32.043	ENSPFOG00000001073	zgc:123010	68	32.297	Poecilia_formosa
ENSAMXG00000010871	si:dkey-33c12.4	55	44.533	ENSPFOG00000009143	si:dkey-33c12.4	96	36.970	Poecilia_formosa
ENSAMXG00000010871	si:dkey-33c12.4	71	32.043	ENSPLAG00000007711	zgc:123010	68	32.297	Poecilia_latipinna
ENSAMXG00000010871	si:dkey-33c12.4	55	44.800	ENSPLAG00000022537	si:dkey-33c12.4	98	37.037	Poecilia_latipinna
ENSAMXG00000010871	si:dkey-33c12.4	71	32.120	ENSPMEG00000005092	zgc:123010	68	32.297	Poecilia_mexicana
ENSAMXG00000010871	si:dkey-33c12.4	55	44.533	ENSPMEG00000015590	si:dkey-33c12.4	96	36.818	Poecilia_mexicana
ENSAMXG00000010871	si:dkey-33c12.4	58	48.395	ENSPMEG00000009905	-	75	44.259	Poecilia_mexicana
ENSAMXG00000010871	si:dkey-33c12.4	56	34.561	ENSPREG00000019587	zgc:123010	73	34.561	Poecilia_reticulata
ENSAMXG00000010871	si:dkey-33c12.4	59	48.030	ENSPREG00000016861	-	76	44.726	Poecilia_reticulata
ENSAMXG00000010871	si:dkey-33c12.4	59	48.201	ENSPNYG00000001047	-	79	43.662	Pundamilia_nyererei
ENSAMXG00000010871	si:dkey-33c12.4	56	45.431	ENSPNYG00000018262	si:dkey-33c12.4	96	37.351	Pundamilia_nyererei
ENSAMXG00000010871	si:dkey-33c12.4	71	31.304	ENSPNYG00000007893	zgc:123010	71	32.374	Pundamilia_nyererei
ENSAMXG00000010871	si:dkey-33c12.4	64	35.149	ENSPNAG00000007579	zgc:123010	69	34.406	Pygocentrus_nattereri
ENSAMXG00000010871	si:dkey-33c12.4	99	67.559	ENSPNAG00000018386	si:dkey-33c12.4	99	68.396	Pygocentrus_nattereri
ENSAMXG00000010871	si:dkey-33c12.4	99	43.101	ENSSFOG00015009199	-	81	45.849	Scleropages_formosus
ENSAMXG00000010871	si:dkey-33c12.4	74	30.335	ENSSFOG00015021394	zgc:123010	75	32.289	Scleropages_formosus
ENSAMXG00000010871	si:dkey-33c12.4	86	50.269	ENSSFOG00015005186	-	88	49.550	Scleropages_formosus
ENSAMXG00000010871	si:dkey-33c12.4	85	38.191	ENSSMAG00000010960	-	85	42.407	Scophthalmus_maximus
ENSAMXG00000010871	si:dkey-33c12.4	97	36.788	ENSSMAG00000008147	si:dkey-33c12.4	96	37.243	Scophthalmus_maximus
ENSAMXG00000010871	si:dkey-33c12.4	72	33.407	ENSSMAG00000002904	zgc:123010	85	30.986	Scophthalmus_maximus
ENSAMXG00000010871	si:dkey-33c12.4	71	33.407	ENSSDUG00000008651	zgc:123010	69	33.816	Seriola_dumerili
ENSAMXG00000010871	si:dkey-33c12.4	98	39.204	ENSSDUG00000003213	si:dkey-33c12.4	96	39.571	Seriola_dumerili
ENSAMXG00000010871	si:dkey-33c12.4	57	50.000	ENSSDUG00000010976	-	76	45.684	Seriola_dumerili
ENSAMXG00000010871	si:dkey-33c12.4	64	31.175	ENSSDUG00000014026	-	92	30.755	Seriola_dumerili
ENSAMXG00000010871	si:dkey-33c12.4	64	44.213	ENSSLDG00000009448	si:dkey-33c12.4	96	38.720	Seriola_lalandi_dorsalis
ENSAMXG00000010871	si:dkey-33c12.4	57	50.255	ENSSLDG00000012846	-	79	46.105	Seriola_lalandi_dorsalis
ENSAMXG00000010871	si:dkey-33c12.4	80	32.812	ENSSLDG00000019386	zgc:123010	86	31.224	Seriola_lalandi_dorsalis
ENSAMXG00000010871	si:dkey-33c12.4	65	33.575	ENSSPAG00000013621	zgc:123010	69	32.850	Stegastes_partitus
ENSAMXG00000010871	si:dkey-33c12.4	57	47.462	ENSSPAG00000004843	-	72	42.292	Stegastes_partitus
ENSAMXG00000010871	si:dkey-33c12.4	53	49.435	ENSSPAG00000022577	-	95	40.798	Stegastes_partitus
ENSAMXG00000010871	si:dkey-33c12.4	70	38.889	ENSTRUG00000000057	-	81	39.831	Takifugu_rubripes
ENSAMXG00000010871	si:dkey-33c12.4	57	42.368	ENSTRUG00000022374	si:dkey-33c12.4	77	38.015	Takifugu_rubripes
ENSAMXG00000010871	si:dkey-33c12.4	76	31.237	ENSTRUG00000024824	zgc:123010	69	33.902	Takifugu_rubripes
ENSAMXG00000010871	si:dkey-33c12.4	51	46.541	ENSTNIG00000010542	-	95	45.210	Tetraodon_nigroviridis
ENSAMXG00000010871	si:dkey-33c12.4	51	35.843	ENSTNIG00000001303	zgc:123010	91	35.843	Tetraodon_nigroviridis
ENSAMXG00000010871	si:dkey-33c12.4	51	34.161	ENSXETG00000033896	-	99	34.161	Xenopus_tropicalis
ENSAMXG00000010871	si:dkey-33c12.4	56	34.078	ENSXCOG00000012281	zgc:123010	78	34.078	Xiphophorus_couchianus
ENSAMXG00000010871	si:dkey-33c12.4	64	33.493	ENSXMAG00000002598	zgc:123010	68	32.297	Xiphophorus_maculatus
ENSAMXG00000010871	si:dkey-33c12.4	55	44.415	ENSXMAG00000018535	si:dkey-33c12.4	96	35.616	Xiphophorus_maculatus