EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010873 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5755 bases
Position: chrAPWO02000047.1:563979-569733
Accession: 103031724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011165	RRM_1	PF00076.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011165	PABPN1L-201	759	XM_007230077	ENSAMXP00000011165	252 (aa)	XP_007230139	W5KUA3

Gene Model

Click here to download ENSAMXG00000010873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010873	PABPN1L	77	53.738	ENSAMXG00000000452	pabpn1	71	70.866

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010873	PABPN1L	71	53.968	ENSG00000205022	PABPN1L	58	56.875	Homo_sapiens
ENSAMXG00000010873	PABPN1L	65	66.471	ENSACIG00000021400	PABPN1L	63	80.357	Amphilophus_citrinellus
ENSAMXG00000010873	PABPN1L	55	70.345	ENSAOCG00000019844	PABPN1L	55	70.345	Amphiprion_ocellaris
ENSAMXG00000010873	PABPN1L	55	70.345	ENSAPEG00000019534	PABPN1L	55	70.345	Amphiprion_percula
ENSAMXG00000010873	PABPN1L	69	66.120	ENSATEG00000011646	PABPN1L	61	71.242	Anabas_testudineus
ENSAMXG00000010873	PABPN1L	66	61.932	ENSACAG00000013250	PABPN1L	75	65.957	Anolis_carolinensis
ENSAMXG00000010873	PABPN1L	71	52.406	ENSANAG00000038178	PABPN1L	58	55.696	Aotus_nancymaae
ENSAMXG00000010873	PABPN1L	54	74.648	ENSACLG00000025147	PABPN1L	55	72.727	Astatotilapia_calliptera
ENSAMXG00000010873	PABPN1L	58	50.000	ENSBTAG00000023752	-	52	48.667	Bos_taurus
ENSAMXG00000010873	PABPN1L	70	53.723	ENSCJAG00000045284	PABPN1L	59	55.215	Callithrix_jacchus
ENSAMXG00000010873	PABPN1L	58	49.689	ENSCHIG00000013987	PABPN1L	54	48.344	Capra_hircus
ENSAMXG00000010873	PABPN1L	58	53.548	ENSCAPG00000007240	PABPN1L	56	52.349	Cavia_aperea
ENSAMXG00000010873	PABPN1L	58	53.548	ENSCPOG00000025951	PABPN1L	55	52.349	Cavia_porcellus
ENSAMXG00000010873	PABPN1L	71	54.545	ENSCCAG00000027631	PABPN1L	58	57.595	Cebus_capucinus
ENSAMXG00000010873	PABPN1L	71	54.497	ENSCATG00000031060	PABPN1L	58	57.500	Cercocebus_atys
ENSAMXG00000010873	PABPN1L	58	53.548	ENSCLAG00000000704	PABPN1L	55	53.020	Chinchilla_lanigera
ENSAMXG00000010873	PABPN1L	71	50.244	ENSCSAG00000002881	PABPN1L	60	52.273	Chlorocebus_sabaeus
ENSAMXG00000010873	PABPN1L	67	53.933	ENSCANG00000039336	PABPN1L	54	57.047	Colobus_angolensis_palliatus
ENSAMXG00000010873	PABPN1L	62	54.545	ENSCGRG00001013211	Pabpn1l	58	53.750	Cricetulus_griseus_chok1gshd
ENSAMXG00000010873	PABPN1L	62	54.545	ENSCGRG00000015868	Pabpn1l	58	53.750	Cricetulus_griseus_crigri
ENSAMXG00000010873	PABPN1L	55	70.213	ENSCSEG00000001142	pabpn1l	54	71.631	Cynoglossus_semilaevis
ENSAMXG00000010873	PABPN1L	56	58.333	ENSDNOG00000034677	PABPN1L	55	58.333	Dasypus_novemcinctus
ENSAMXG00000010873	PABPN1L	70	52.381	ENSEASG00005000777	PABPN1L	56	56.954	Equus_asinus_asinus
ENSAMXG00000010873	PABPN1L	70	51.064	ENSECAG00000000378	PABPN1L	60	52.174	Equus_caballus
ENSAMXG00000010873	PABPN1L	69	46.774	ENSEEUG00000004747	PABPN1L	54	50.331	Erinaceus_europaeus
ENSAMXG00000010873	PABPN1L	68	75.691	ENSELUG00000018385	PABPN1L	71	76.796	Esox_lucius
ENSAMXG00000010873	PABPN1L	66	54.237	ENSFCAG00000010465	PABPN1L	54	56.667	Felis_catus
ENSAMXG00000010873	PABPN1L	69	55.135	ENSFALG00000003319	PABPN1L	58	62.143	Ficedula_albicollis
ENSAMXG00000010873	PABPN1L	58	56.774	ENSFDAG00000021067	PABPN1L	55	55.705	Fukomys_damarensis
ENSAMXG00000010873	PABPN1L	55	70.946	ENSGMOG00000001475	PABPN1L	56	72.973	Gadus_morhua
ENSAMXG00000010873	PABPN1L	55	68.456	ENSGACG00000015428	PABPN1L	56	69.799	Gasterosteus_aculeatus
ENSAMXG00000010873	PABPN1L	65	62.424	ENSGAGG00000010613	PABPN1L	50	64.138	Gopherus_agassizii
ENSAMXG00000010873	PABPN1L	68	55.249	ENSGGOG00000012670	PABPN1L	58	56.875	Gorilla_gorilla
ENSAMXG00000010873	PABPN1L	54	74.648	ENSHBUG00000002388	PABPN1L	55	72.917	Haplochromis_burtoni
ENSAMXG00000010873	PABPN1L	59	54.777	ENSHGLG00000014207	PABPN1L	58	54.362	Heterocephalus_glaber_female
ENSAMXG00000010873	PABPN1L	59	54.777	ENSHGLG00100005230	PABPN1L	58	54.362	Heterocephalus_glaber_male
ENSAMXG00000010873	PABPN1L	71	76.216	ENSIPUG00000023583	PABPN1L	95	77.297	Ictalurus_punctatus
ENSAMXG00000010873	PABPN1L	62	53.552	ENSSTOG00000020814	PABPN1L	54	57.333	Ictidomys_tridecemlineatus
ENSAMXG00000010873	PABPN1L	58	55.629	ENSJJAG00000006433	Pabpn1l	54	55.172	Jaculus_jaculus
ENSAMXG00000010873	PABPN1L	55	70.345	ENSLBEG00000011647	PABPN1L	53	72.414	Labrus_bergylta
ENSAMXG00000010873	PABPN1L	65	50.000	ENSLAFG00000025902	-	59	50.980	Loxodonta_africana
ENSAMXG00000010873	PABPN1L	71	54.497	ENSMFAG00000002924	PABPN1L	58	57.500	Macaca_fascicularis
ENSAMXG00000010873	PABPN1L	71	53.723	ENSMMUG00000012438	PABPN1L	58	56.604	Macaca_mulatta
ENSAMXG00000010873	PABPN1L	71	54.497	ENSMNEG00000044808	PABPN1L	58	57.500	Macaca_nemestrina
ENSAMXG00000010873	PABPN1L	62	58.434	ENSMLEG00000032667	PABPN1L	58	57.500	Mandrillus_leucophaeus
ENSAMXG00000010873	PABPN1L	54	74.648	ENSMZEG00005002186	PABPN1L	55	72.727	Maylandia_zebra
ENSAMXG00000010873	PABPN1L	62	53.939	ENSMAUG00000014032	Pabpn1l	61	53.125	Mesocricetus_auratus
ENSAMXG00000010873	PABPN1L	67	51.685	ENSMICG00000028179	PABPN1L	54	54.362	Microcebus_murinus
ENSAMXG00000010873	PABPN1L	62	52.727	ENSMOCG00000007955	Pabpn1l	59	51.875	Microtus_ochrogaster
ENSAMXG00000010873	PABPN1L	67	51.913	ENSMODG00000003873	-	56	54.667	Monodelphis_domestica
ENSAMXG00000010873	PABPN1L	58	71.523	ENSMALG00000016926	PABPN1L	55	74.306	Monopterus_albus
ENSAMXG00000010873	PABPN1L	71	50.794	MGP_CAROLIEiJ_G0031670	Pabpn1l	58	53.797	Mus_caroli
ENSAMXG00000010873	PABPN1L	71	51.323	ENSMUSG00000069867	Pabpn1l	58	54.430	Mus_musculus
ENSAMXG00000010873	PABPN1L	73	51.000	MGP_PahariEiJ_G0023268	Pabpn1l	58	54.430	Mus_pahari
ENSAMXG00000010873	PABPN1L	71	51.323	MGP_SPRETEiJ_G0032788	Pabpn1l	58	54.430	Mus_spretus
ENSAMXG00000010873	PABPN1L	65	52.841	ENSNGAG00000023992	Pabpn1l	55	55.034	Nannospalax_galili
ENSAMXG00000010873	PABPN1L	54	74.648	ENSNBRG00000017078	PABPN1L	60	72.727	Neolamprologus_brichardi
ENSAMXG00000010873	PABPN1L	61	53.988	ENSOPRG00000005597	PABPN1L	55	55.705	Ochotona_princeps
ENSAMXG00000010873	PABPN1L	58	54.545	ENSODEG00000004649	PABPN1L	54	54.054	Octodon_degus
ENSAMXG00000010873	PABPN1L	67	57.310	ENSOANG00000013901	PABPN1L	54	60.284	Ornithorhynchus_anatinus
ENSAMXG00000010873	PABPN1L	92	53.361	ENSORLG00000026560	PABPN1L	54	70.213	Oryzias_latipes
ENSAMXG00000010873	PABPN1L	92	53.361	ENSORLG00020015068	PABPN1L	54	70.213	Oryzias_latipes_hni
ENSAMXG00000010873	PABPN1L	92	53.361	ENSORLG00015000397	PABPN1L	54	70.213	Oryzias_latipes_hsok
ENSAMXG00000010873	PABPN1L	71	50.538	ENSOGAG00000000433	PABPN1L	57	53.503	Otolemur_garnettii
ENSAMXG00000010873	PABPN1L	63	50.000	ENSOARG00000013682	PABPN1L	53	51.235	Ovis_aries
ENSAMXG00000010873	PABPN1L	71	53.968	ENSPPAG00000028866	PABPN1L	58	56.875	Pan_paniscus
ENSAMXG00000010873	PABPN1L	66	52.273	ENSPPRG00000015106	PABPN1L	54	55.333	Panthera_pardus
ENSAMXG00000010873	PABPN1L	71	53.968	ENSPTRG00000031120	PABPN1L	58	56.875	Pan_troglodytes
ENSAMXG00000010873	PABPN1L	71	53.968	ENSPANG00000026039	PABPN1L	58	56.875	Papio_anubis
ENSAMXG00000010873	PABPN1L	63	63.030	ENSPSIG00000003404	PABPN1L	76	63.758	Pelodiscus_sinensis
ENSAMXG00000010873	PABPN1L	62	53.939	ENSPEMG00000016624	Pabpn1l	60	53.125	Peromyscus_maniculatus_bairdii
ENSAMXG00000010873	PABPN1L	71	53.439	ENSPPYG00000007655	PABPN1L	57	56.250	Pongo_abelii
ENSAMXG00000010873	PABPN1L	67	53.889	ENSPCOG00000024077	PABPN1L	54	56.291	Propithecus_coquereli
ENSAMXG00000010873	PABPN1L	66	52.841	ENSPVAG00000002716	PABPN1L	55	55.195	Pteropus_vampyrus
ENSAMXG00000010873	PABPN1L	54	74.648	ENSPNYG00000004803	PABPN1L	55	72.727	Pundamilia_nyererei
ENSAMXG00000010873	PABPN1L	61	52.761	ENSRNOG00000029558	Pabpn1l	59	51.899	Rattus_norvegicus
ENSAMXG00000010873	PABPN1L	71	52.910	ENSRBIG00000030740	PABPN1L	58	55.625	Rhinopithecus_bieti
ENSAMXG00000010873	PABPN1L	71	52.910	ENSRROG00000032240	-	58	55.625	Rhinopithecus_roxellana
ENSAMXG00000010873	PABPN1L	71	53.968	ENSRROG00000035483	-	58	56.875	Rhinopithecus_roxellana
ENSAMXG00000010873	PABPN1L	71	55.080	ENSSBOG00000018410	PABPN1L	58	58.228	Saimiri_boliviensis_boliviensis
ENSAMXG00000010873	PABPN1L	67	51.813	ENSSHAG00000010001	-	54	55.128	Sarcophilus_harrisii
ENSAMXG00000010873	PABPN1L	55	69.930	ENSSMAG00000021348	PABPN1L	54	71.329	Scophthalmus_maximus
ENSAMXG00000010873	PABPN1L	55	70.345	ENSSDUG00000006986	PABPN1L	55	70.345	Seriola_dumerili
ENSAMXG00000010873	PABPN1L	55	70.345	ENSSLDG00000021845	PABPN1L	55	70.345	Seriola_lalandi_dorsalis
ENSAMXG00000010873	PABPN1L	69	47.701	ENSSARG00000005178	-	63	48.322	Sorex_araneus
ENSAMXG00000010873	PABPN1L	65	60.843	ENSSPUG00000007031	PABPN1L	63	64.029	Sphenodon_punctatus
ENSAMXG00000010873	PABPN1L	65	67.429	ENSSPAG00000017978	PABPN1L	55	70.345	Stegastes_partitus
ENSAMXG00000010873	PABPN1L	61	54.938	ENSSSCG00000036367	PABPN1L	54	55.782	Sus_scrofa
ENSAMXG00000010873	PABPN1L	55	70.833	ENSTRUG00000024725	PABPN1L	62	72.222	Takifugu_rubripes
ENSAMXG00000010873	PABPN1L	70	48.438	ENSTTRG00000004691	PABPN1L	58	50.932	Tursiops_truncatus
ENSAMXG00000010873	PABPN1L	55	54.545	ENSXETG00000011258	pabpn1l	71	54.545	Xenopus_tropicalis