EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000010959 (Gene tree)
Gene ID: 103037282
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 104031 bases
Position: chr23:23685662-23789692
Accession: 103037282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040647	IPPT	PF01715.17	8.4e-67	1	1
ENSAMXP00000050251	IPPT	PF01715.17	1.1e-66	1	1
ENSAMXP00000049142	IPPT	PF01715.17	1.2e-66	1	1
ENSAMXP00000011254	IPPT	PF01715.17	1.4e-66	1	1
ENSAMXP00000050385	IPPT	PF01715.17	1.8e-57	1	1
ENSAMXP00000050251	zf-C2H2_jaz	PF12171.8	1.3e-06	1	1
ENSAMXP00000050385	zf-C2H2_jaz	PF12171.8	1.4e-06	1	1
ENSAMXP00000011254	zf-C2H2_jaz	PF12171.8	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046860	-	1839	-	ENSAMXP00000050385	463 (aa)	-	-
ENSAMXT00000052814	-	1794	-	ENSAMXP00000049142	448 (aa)	-	-
ENSAMXT00000011254	-	1917	-	ENSAMXP00000011254	489 (aa)	-	W5KUJ2
ENSAMXT00000040415	-	6953	XM_007249276	ENSAMXP00000050251	448 (aa)	XP_007249338	-
ENSAMXT00000055766	-	1611	-	ENSAMXP00000040647	387 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000010959's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010959	trit1	98	59.202	ENSG00000043514	TRIT1	96	68.657	Homo_sapiens
ENSAMXG00000010959	trit1	94	73.193	ENSAPOG00000020918	trit1	93	73.193	Acanthochromis_polyacanthus
ENSAMXG00000010959	trit1	89	62.376	ENSAMEG00000004342	TRIT1	91	60.890	Ailuropoda_melanoleuca
ENSAMXG00000010959	trit1	88	74.046	ENSACIG00000017409	trit1	91	72.512	Amphilophus_citrinellus
ENSAMXG00000010959	trit1	99	69.623	ENSAOCG00000009850	trit1	93	69.623	Amphiprion_ocellaris
ENSAMXG00000010959	trit1	99	69.180	ENSAPEG00000001481	trit1	93	69.180	Amphiprion_percula
ENSAMXG00000010959	trit1	97	68.539	ENSATEG00000005426	trit1	93	68.539	Anabas_testudineus
ENSAMXG00000010959	trit1	72	51.940	ENSAPLG00000011421	TRIT1	95	51.940	Anas_platyrhynchos
ENSAMXG00000010959	trit1	91	59.903	ENSACAG00000002280	TRIT1	91	55.799	Anolis_carolinensis
ENSAMXG00000010959	trit1	98	58.758	ENSANAG00000030732	TRIT1	96	58.980	Aotus_nancymaae
ENSAMXG00000010959	trit1	97	69.888	ENSACLG00000004920	trit1	93	69.888	Astatotilapia_calliptera
ENSAMXG00000010959	trit1	92	62.981	ENSBTAG00000013832	TRIT1	91	62.061	Bos_taurus
ENSAMXG00000010959	trit1	86	35.714	WBGene00001740	gro-1	96	36.000	Caenorhabditis_elegans
ENSAMXG00000010959	trit1	97	59.111	ENSCJAG00000002620	TRIT1	97	61.561	Callithrix_jacchus
ENSAMXG00000010959	trit1	90	61.836	ENSCAFG00000003048	TRIT1	91	61.412	Canis_familiaris
ENSAMXG00000010959	trit1	90	60.187	ENSCAFG00020003875	TRIT1	96	61.207	Canis_lupus_dingo
ENSAMXG00000010959	trit1	89	62.654	ENSCHIG00000013259	TRIT1	92	60.789	Capra_hircus
ENSAMXG00000010959	trit1	89	63.614	ENSTSYG00000004363	TRIT1	92	61.827	Carlito_syrichta
ENSAMXG00000010959	trit1	74	55.457	ENSCAPG00000017001	TRIT1	88	55.457	Cavia_aperea
ENSAMXG00000010959	trit1	94	59.016	ENSCPOG00000012820	TRIT1	96	57.684	Cavia_porcellus
ENSAMXG00000010959	trit1	98	58.537	ENSCCAG00000031271	TRIT1	97	62.242	Cebus_capucinus
ENSAMXG00000010959	trit1	98	56.444	ENSCATG00000034344	TRIT1	97	63.636	Cercocebus_atys
ENSAMXG00000010959	trit1	94	59.953	ENSCLAG00000009828	TRIT1	97	58.407	Chinchilla_lanigera
ENSAMXG00000010959	trit1	87	58.838	ENSCSAG00000001137	TRIT1	96	58.838	Chlorocebus_sabaeus
ENSAMXG00000010959	trit1	89	63.275	ENSCHOG00000000435	TRIT1	91	61.848	Choloepus_hoffmanni
ENSAMXG00000010959	trit1	90	45.346	ENSCSAVG00000002050	-	92	45.346	Ciona_savignyi
ENSAMXG00000010959	trit1	98	59.508	ENSCANG00000043008	TRIT1	97	63.343	Colobus_angolensis_palliatus
ENSAMXG00000010959	trit1	90	62.927	ENSCGRG00001001894	Trit1	91	61.772	Cricetulus_griseus_chok1gshd
ENSAMXG00000010959	trit1	82	61.930	ENSCGRG00000007059	Trit1	82	61.518	Cricetulus_griseus_crigri
ENSAMXG00000010959	trit1	90	70.361	ENSCSEG00000009574	trit1	92	69.444	Cynoglossus_semilaevis
ENSAMXG00000010959	trit1	97	71.556	ENSDARG00000032876	trit1	99	75.676	Danio_rerio
ENSAMXG00000010959	trit1	81	62.585	ENSDNOG00000001994	TRIT1	92	53.306	Dasypus_novemcinctus
ENSAMXG00000010959	trit1	89	55.802	ENSDORG00000012449	Trit1	94	54.439	Dipodomys_ordii
ENSAMXG00000010959	trit1	93	39.159	FBgn0043799	CG31381	95	38.780	Drosophila_melanogaster
ENSAMXG00000010959	trit1	88	61.671	ENSETEG00000008733	TRIT1	99	60.377	Echinops_telfairi
ENSAMXG00000010959	trit1	93	54.439	ENSEBUG00000012845	trit1	95	54.439	Eptatretus_burgeri
ENSAMXG00000010959	trit1	89	60.922	ENSECAG00000010597	TRIT1	86	57.303	Equus_caballus
ENSAMXG00000010959	trit1	80	56.426	ENSEEUG00000009269	TRIT1	75	57.022	Erinaceus_europaeus
ENSAMXG00000010959	trit1	95	64.989	ENSELUG00000017278	trit1	91	64.989	Esox_lucius
ENSAMXG00000010959	trit1	89	61.881	ENSFCAG00000006029	TRIT1	91	60.329	Felis_catus
ENSAMXG00000010959	trit1	83	61.436	ENSFALG00000000532	TRIT1	94	61.436	Ficedula_albicollis
ENSAMXG00000010959	trit1	89	60.577	ENSFDAG00000003098	TRIT1	96	59.404	Fukomys_damarensis
ENSAMXG00000010959	trit1	84	61.677	ENSFHEG00000022274	trit1	99	61.976	Fundulus_heteroclitus
ENSAMXG00000010959	trit1	93	72.558	ENSGMOG00000006522	trit1	99	72.558	Gadus_morhua
ENSAMXG00000010959	trit1	95	61.485	ENSGALG00000003851	TRIT1	94	61.485	Gallus_gallus
ENSAMXG00000010959	trit1	84	69.725	ENSGAFG00000018636	trit1	98	68.199	Gambusia_affinis
ENSAMXG00000010959	trit1	93	70.000	ENSGACG00000008493	trit1	99	70.000	Gasterosteus_aculeatus
ENSAMXG00000010959	trit1	81	62.264	ENSGAGG00000000522	TRIT1	92	62.264	Gopherus_agassizii
ENSAMXG00000010959	trit1	98	59.202	ENSGGOG00000010070	TRIT1	97	62.757	Gorilla_gorilla
ENSAMXG00000010959	trit1	97	69.663	ENSHBUG00000018999	trit1	93	69.663	Haplochromis_burtoni
ENSAMXG00000010959	trit1	91	55.556	ENSHGLG00000009564	-	95	54.128	Heterocephalus_glaber_female
ENSAMXG00000010959	trit1	94	59.346	ENSHGLG00000010308	-	97	57.965	Heterocephalus_glaber_female
ENSAMXG00000010959	trit1	94	59.346	ENSHGLG00100015382	-	97	58.259	Heterocephalus_glaber_male
ENSAMXG00000010959	trit1	82	47.200	ENSHGLG00100018159	-	97	47.200	Heterocephalus_glaber_male
ENSAMXG00000010959	trit1	90	69.231	ENSHCOG00000006755	trit1	82	72.472	Hippocampus_comes
ENSAMXG00000010959	trit1	99	77.506	ENSIPUG00000021822	trit1	93	77.506	Ictalurus_punctatus
ENSAMXG00000010959	trit1	91	61.631	ENSSTOG00000006446	TRIT1	91	60.046	Ictidomys_tridecemlineatus
ENSAMXG00000010959	trit1	94	55.504	ENSJJAG00000000300	-	95	54.709	Jaculus_jaculus
ENSAMXG00000010959	trit1	92	57.279	ENSJJAG00000000316	-	93	57.279	Jaculus_jaculus
ENSAMXG00000010959	trit1	98	67.411	ENSKMAG00000021788	trit1	93	67.411	Kryptolebias_marmoratus
ENSAMXG00000010959	trit1	95	70.872	ENSLBEG00000024262	trit1	91	70.872	Labrus_bergylta
ENSAMXG00000010959	trit1	94	65.438	ENSLACG00000013861	TRIT1	90	64.430	Latimeria_chalumnae
ENSAMXG00000010959	trit1	95	71.818	ENSLOCG00000002057	trit1	93	71.655	Lepisosteus_oculatus
ENSAMXG00000010959	trit1	93	59.857	ENSLAFG00000016876	TRIT1	91	59.670	Loxodonta_africana
ENSAMXG00000010959	trit1	98	59.732	ENSMFAG00000001316	TRIT1	97	63.636	Macaca_fascicularis
ENSAMXG00000010959	trit1	98	59.732	ENSMMUG00000016220	TRIT1	97	63.636	Macaca_mulatta
ENSAMXG00000010959	trit1	98	59.732	ENSMNEG00000023137	TRIT1	97	63.636	Macaca_nemestrina
ENSAMXG00000010959	trit1	98	59.508	ENSMLEG00000035296	TRIT1	97	63.636	Mandrillus_leucophaeus
ENSAMXG00000010959	trit1	94	71.329	ENSMAMG00000005868	trit1	90	71.329	Mastacembelus_armatus
ENSAMXG00000010959	trit1	97	69.663	ENSMZEG00005011506	trit1	93	69.663	Maylandia_zebra
ENSAMXG00000010959	trit1	81	61.290	ENSMGAG00000005516	TRIT1	99	61.290	Meleagris_gallopavo
ENSAMXG00000010959	trit1	89	62.871	ENSMAUG00000000399	Trit1	91	61.557	Mesocricetus_auratus
ENSAMXG00000010959	trit1	89	62.376	ENSMICG00000016294	TRIT1	91	60.706	Microcebus_murinus
ENSAMXG00000010959	trit1	89	63.366	ENSMOCG00000008173	Trit1	91	62.028	Microtus_ochrogaster
ENSAMXG00000010959	trit1	86	65.909	ENSMMOG00000021140	trit1	92	65.909	Mola_mola
ENSAMXG00000010959	trit1	89	63.171	ENSMODG00000017650	TRIT1	93	62.061	Monodelphis_domestica
ENSAMXG00000010959	trit1	95	68.203	ENSMALG00000017843	trit1	93	67.416	Monopterus_albus
ENSAMXG00000010959	trit1	90	63.659	MGP_CAROLIEiJ_G0026428	Trit1	91	62.471	Mus_caroli
ENSAMXG00000010959	trit1	90	63.902	ENSMUSG00000028653	Trit1	91	62.704	Mus_musculus
ENSAMXG00000010959	trit1	92	62.500	MGP_PahariEiJ_G0028758	Trit1	93	61.379	Mus_pahari
ENSAMXG00000010959	trit1	90	63.659	MGP_SPRETEiJ_G0027408	Trit1	91	62.471	Mus_spretus
ENSAMXG00000010959	trit1	92	60.859	ENSMPUG00000014291	TRIT1	91	60.941	Mustela_putorius_furo
ENSAMXG00000010959	trit1	92	60.096	ENSMLUG00000000334	TRIT1	91	59.906	Myotis_lucifugus
ENSAMXG00000010959	trit1	98	59.202	ENSNLEG00000012038	TRIT1	97	63.050	Nomascus_leucogenys
ENSAMXG00000010959	trit1	93	56.028	ENSMEUG00000005217	TRIT1	95	55.204	Notamacropus_eugenii
ENSAMXG00000010959	trit1	50	68.421	ENSOPRG00000003205	-	52	68.421	Ochotona_princeps
ENSAMXG00000010959	trit1	94	58.469	ENSODEG00000006117	TRIT1	96	57.461	Octodon_degus
ENSAMXG00000010959	trit1	97	69.111	ENSONIG00000015407	trit1	95	69.027	Oreochromis_niloticus
ENSAMXG00000010959	trit1	81	61.892	ENSOANG00000002779	TRIT1	94	61.892	Ornithorhynchus_anatinus
ENSAMXG00000010959	trit1	94	60.142	ENSOCUG00000002054	TRIT1	94	59.226	Oryctolagus_cuniculus
ENSAMXG00000010959	trit1	94	69.142	ENSORLG00000005802	trit1	93	69.142	Oryzias_latipes
ENSAMXG00000010959	trit1	94	69.374	ENSORLG00020005519	trit1	93	69.374	Oryzias_latipes_hni
ENSAMXG00000010959	trit1	94	69.374	ENSORLG00015018715	trit1	93	69.374	Oryzias_latipes_hsok
ENSAMXG00000010959	trit1	93	69.762	ENSOMEG00000006569	trit1	94	68.591	Oryzias_melastigma
ENSAMXG00000010959	trit1	90	62.287	ENSOGAG00000009571	TRIT1	91	61.124	Otolemur_garnettii
ENSAMXG00000010959	trit1	89	63.951	ENSOARG00000020140	TRIT1	91	62.207	Ovis_aries
ENSAMXG00000010959	trit1	98	59.202	ENSPPAG00000023930	TRIT1	97	63.050	Pan_paniscus
ENSAMXG00000010959	trit1	89	61.634	ENSPPRG00000009680	TRIT1	91	60.235	Panthera_pardus
ENSAMXG00000010959	trit1	89	61.634	ENSPTIG00000021134	TRIT1	91	60.235	Panthera_tigris_altaica
ENSAMXG00000010959	trit1	98	59.202	ENSPTRG00000000579	TRIT1	97	63.050	Pan_troglodytes
ENSAMXG00000010959	trit1	98	59.508	ENSPANG00000018125	TRIT1	97	63.343	Papio_anubis
ENSAMXG00000010959	trit1	85	67.632	ENSPKIG00000024527	trit1	99	67.632	Paramormyrops_kingsleyae
ENSAMXG00000010959	trit1	79	48.023	ENSPSIG00000017073	TRIT1	99	48.023	Pelodiscus_sinensis
ENSAMXG00000010959	trit1	79	71.667	ENSPMGG00000018445	trit1	95	69.251	Periophthalmus_magnuspinnatus
ENSAMXG00000010959	trit1	89	63.119	ENSPEMG00000022418	Trit1	91	61.792	Peromyscus_maniculatus_bairdii
ENSAMXG00000010959	trit1	82	59.008	ENSPMAG00000008892	trit1	96	59.008	Petromyzon_marinus
ENSAMXG00000010959	trit1	89	63.260	ENSPCIG00000020666	TRIT1	98	63.768	Phascolarctos_cinereus
ENSAMXG00000010959	trit1	95	67.586	ENSPFOG00000014626	trit1	92	67.586	Poecilia_formosa
ENSAMXG00000010959	trit1	85	69.605	ENSPLAG00000011669	trit1	97	69.789	Poecilia_latipinna
ENSAMXG00000010959	trit1	68	67.424	ENSPMEG00000023788	trit1	98	67.424	Poecilia_mexicana
ENSAMXG00000010959	trit1	84	70.642	ENSPREG00000018182	trit1	94	70.642	Poecilia_reticulata
ENSAMXG00000010959	trit1	98	59.424	ENSPPYG00000001499	TRIT1	97	59.424	Pongo_abelii
ENSAMXG00000010959	trit1	71	51.242	ENSPCAG00000014680	TRIT1	89	51.242	Procavia_capensis
ENSAMXG00000010959	trit1	89	61.386	ENSPCOG00000014150	TRIT1	91	59.813	Propithecus_coquereli
ENSAMXG00000010959	trit1	92	54.808	ENSPVAG00000003344	TRIT1	91	54.118	Pteropus_vampyrus
ENSAMXG00000010959	trit1	77	71.429	ENSPNYG00000001003	trit1	100	71.197	Pundamilia_nyererei
ENSAMXG00000010959	trit1	100	81.920	ENSPNAG00000009466	trit1	96	83.914	Pygocentrus_nattereri
ENSAMXG00000010959	trit1	96	59.060	ENSRNOG00000014274	Trit1	96	58.244	Rattus_norvegicus
ENSAMXG00000010959	trit1	98	59.508	ENSRBIG00000043179	TRIT1	97	63.343	Rhinopithecus_bieti
ENSAMXG00000010959	trit1	98	59.508	ENSRROG00000042670	TRIT1	97	63.343	Rhinopithecus_roxellana
ENSAMXG00000010959	trit1	88	33.494	YOR274W	-	92	33.494	Saccharomyces_cerevisiae
ENSAMXG00000010959	trit1	98	58.537	ENSSBOG00000024417	TRIT1	97	62.941	Saimiri_boliviensis_boliviensis
ENSAMXG00000010959	trit1	83	60.052	ENSSHAG00000018363	TRIT1	91	60.052	Sarcophilus_harrisii
ENSAMXG00000010959	trit1	96	69.266	ENSSFOG00015007284	trit1	91	65.890	Scleropages_formosus
ENSAMXG00000010959	trit1	95	69.885	ENSSMAG00000020730	trit1	92	69.885	Scophthalmus_maximus
ENSAMXG00000010959	trit1	95	70.208	ENSSDUG00000001683	trit1	90	70.208	Seriola_dumerili
ENSAMXG00000010959	trit1	90	70.944	ENSSLDG00000008379	trit1	90	69.515	Seriola_lalandi_dorsalis
ENSAMXG00000010959	trit1	95	59.184	ENSSARG00000004540	TRIT1	94	58.758	Sorex_araneus
ENSAMXG00000010959	trit1	82	61.749	ENSSPUG00000003472	TRIT1	76	61.749	Sphenodon_punctatus
ENSAMXG00000010959	trit1	90	72.749	ENSSPAG00000020745	trit1	91	72.749	Stegastes_partitus
ENSAMXG00000010959	trit1	82	58.933	ENSTGUG00000001242	TRIT1	100	58.933	Taeniopygia_guttata
ENSAMXG00000010959	trit1	99	66.741	ENSTRUG00000013936	trit1	99	66.741	Takifugu_rubripes
ENSAMXG00000010959	trit1	98	66.816	ENSTNIG00000009240	trit1	98	67.040	Tetraodon_nigroviridis
ENSAMXG00000010959	trit1	73	71.739	ENSTBEG00000001317	TRIT1	72	68.627	Tupaia_belangeri
ENSAMXG00000010959	trit1	89	62.871	ENSTTRG00000005064	TRIT1	91	61.176	Tursiops_truncatus
ENSAMXG00000010959	trit1	63	62.097	ENSUAMG00000000522	-	99	59.779	Ursus_americanus
ENSAMXG00000010959	trit1	89	62.376	ENSUMAG00000017299	TRIT1	82	60.890	Ursus_maritimus
ENSAMXG00000010959	trit1	89	58.416	ENSVPAG00000003008	TRIT1	91	56.876	Vicugna_pacos
ENSAMXG00000010959	trit1	90	61.058	ENSXETG00000010952	trit1	91	61.058	Xenopus_tropicalis
ENSAMXG00000010959	trit1	84	70.642	ENSXMAG00000016302	trit1	91	70.948	Xiphophorus_maculatus