EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000010979 (Gene tree)
Gene ID: 103035326
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: sal-like protein 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 13985 bases
Position: chr16:31548920-31562904
Accession: 103035326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036045	zf-C2H2	PF00096.26	4.4e-19	1	2
ENSAMXP00000036045	zf-C2H2	PF00096.26	4.4e-19	2	2
ENSAMXP00000034653	zf-C2H2	PF00096.26	5.8e-19	1	2
ENSAMXP00000034653	zf-C2H2	PF00096.26	5.8e-19	2	2
ENSAMXP00000011272	zf-C2H2	PF00096.26	5.9e-19	1	2
ENSAMXP00000011272	zf-C2H2	PF00096.26	5.9e-19	2	2
ENSAMXP00000032412	zf-C2H2	PF00096.26	3.7e-16	1	1
ENSAMXP00000036045	zf-met	PF12874.7	1.9e-11	1	2
ENSAMXP00000036045	zf-met	PF12874.7	1.9e-11	2	2
ENSAMXP00000032412	zf-met	PF12874.7	4.3e-11	1	2
ENSAMXP00000032412	zf-met	PF12874.7	4.3e-11	2	2
ENSAMXP00000034653	zf-met	PF12874.7	3.9e-10	1	2
ENSAMXP00000034653	zf-met	PF12874.7	3.9e-10	2	2
ENSAMXP00000011272	zf-met	PF12874.7	4.1e-10	1	2
ENSAMXP00000011272	zf-met	PF12874.7	4.1e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055815	-	3408	-	ENSAMXP00000036045	1135 (aa)	-	-
ENSAMXT00000042410	-	7544	-	ENSAMXP00000032412	1154 (aa)	-	-
ENSAMXT00000037513	-	7413	XM_007248016	ENSAMXP00000034653	1217 (aa)	XP_007248078	UPI000BBDF3CF
ENSAMXT00000011272	-	3810	-	ENSAMXP00000011272	1224 (aa)	-	W5KUL0

Gene Model

Click here to download ENSAMXG00000010979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000010979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000010979	si:ch211-212k18.5	60	80.645	ENSAMXG00000020956	sall2	64	80.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000010979	si:ch211-212k18.5	74	82.759	ENSAPOG00000015347	sall2	70	68.421	Acanthochromis_polyacanthus
ENSAMXG00000010979	si:ch211-212k18.5	99	53.739	ENSAPOG00000013387	si:ch211-212k18.5	99	53.828	Acanthochromis_polyacanthus
ENSAMXG00000010979	si:ch211-212k18.5	81	60.423	ENSACIG00000019922	si:ch211-212k18.5	87	66.589	Amphilophus_citrinellus
ENSAMXG00000010979	si:ch211-212k18.5	99	55.300	ENSAOCG00000010737	si:ch211-212k18.5	99	55.793	Amphiprion_ocellaris
ENSAMXG00000010979	si:ch211-212k18.5	74	82.759	ENSAOCG00000016559	sall2	69	82.759	Amphiprion_ocellaris
ENSAMXG00000010979	si:ch211-212k18.5	61	44.484	ENSAPEG00000020215	sall2	87	46.692	Amphiprion_percula
ENSAMXG00000010979	si:ch211-212k18.5	99	55.045	ENSAPEG00000006751	si:ch211-212k18.5	99	55.537	Amphiprion_percula
ENSAMXG00000010979	si:ch211-212k18.5	66	43.571	ENSATEG00000007303	sall2	74	46.154	Anabas_testudineus
ENSAMXG00000010979	si:ch211-212k18.5	71	66.513	ENSATEG00000001254	si:ch211-212k18.5	92	66.937	Anabas_testudineus
ENSAMXG00000010979	si:ch211-212k18.5	59	82.759	ENSACLG00000019867	sall2	65	82.759	Astatotilapia_calliptera
ENSAMXG00000010979	si:ch211-212k18.5	99	54.079	ENSACLG00000009709	si:ch211-212k18.5	99	53.940	Astatotilapia_calliptera
ENSAMXG00000010979	si:ch211-212k18.5	99	53.431	ENSCSEG00000004426	si:ch211-212k18.5	98	54.582	Cynoglossus_semilaevis
ENSAMXG00000010979	si:ch211-212k18.5	77	46.605	ENSCSEG00000021148	sall2	93	38.281	Cynoglossus_semilaevis
ENSAMXG00000010979	si:ch211-212k18.5	59	78.125	ENSCVAG00000006032	sall2	62	78.125	Cyprinodon_variegatus
ENSAMXG00000010979	si:ch211-212k18.5	99	55.044	ENSCVAG00000007475	si:ch211-212k18.5	99	55.008	Cyprinodon_variegatus
ENSAMXG00000010979	si:ch211-212k18.5	59	56.250	ENSDARG00000075116	sall2	68	56.250	Danio_rerio
ENSAMXG00000010979	si:ch211-212k18.5	100	66.838	ENSDARG00000103316	si:ch211-212k18.5	100	66.325	Danio_rerio
ENSAMXG00000010979	si:ch211-212k18.5	71	50.802	ENSELUG00000004389	sall2	64	57.143	Esox_lucius
ENSAMXG00000010979	si:ch211-212k18.5	99	51.505	ENSELUG00000024534	si:ch211-212k18.5	97	54.377	Esox_lucius
ENSAMXG00000010979	si:ch211-212k18.5	99	56.371	ENSFHEG00000017264	si:ch211-212k18.5	99	56.533	Fundulus_heteroclitus
ENSAMXG00000010979	si:ch211-212k18.5	62	78.125	ENSFHEG00000017550	sall2	66	78.125	Fundulus_heteroclitus
ENSAMXG00000010979	si:ch211-212k18.5	99	53.663	ENSGAFG00000003746	si:ch211-212k18.5	95	55.955	Gambusia_affinis
ENSAMXG00000010979	si:ch211-212k18.5	61	46.347	ENSGAFG00000015194	sall2	70	50.794	Gambusia_affinis
ENSAMXG00000010979	si:ch211-212k18.5	73	82.759	ENSHBUG00000002882	sall2	71	82.759	Haplochromis_burtoni
ENSAMXG00000010979	si:ch211-212k18.5	99	53.987	ENSHBUG00000019672	si:ch211-212k18.5	99	55.277	Haplochromis_burtoni
ENSAMXG00000010979	si:ch211-212k18.5	96	53.553	ENSHCOG00000002842	si:ch211-212k18.5	98	53.328	Hippocampus_comes
ENSAMXG00000010979	si:ch211-212k18.5	99	73.780	ENSIPUG00000002559	sall2	100	72.512	Ictalurus_punctatus
ENSAMXG00000010979	si:ch211-212k18.5	59	78.125	ENSKMAG00000020172	sall2	67	51.667	Kryptolebias_marmoratus
ENSAMXG00000010979	si:ch211-212k18.5	99	54.105	ENSKMAG00000019657	si:ch211-212k18.5	98	55.746	Kryptolebias_marmoratus
ENSAMXG00000010979	si:ch211-212k18.5	99	56.763	ENSLBEG00000020887	si:ch211-212k18.5	97	56.351	Labrus_bergylta
ENSAMXG00000010979	si:ch211-212k18.5	56	56.000	ENSMMUG00000003870	SALL4	52	56.000	Macaca_mulatta
ENSAMXG00000010979	si:ch211-212k18.5	61	56.364	ENSMAMG00000016229	sall2	65	56.364	Mastacembelus_armatus
ENSAMXG00000010979	si:ch211-212k18.5	71	67.206	ENSMAMG00000015887	si:ch211-212k18.5	99	68.293	Mastacembelus_armatus
ENSAMXG00000010979	si:ch211-212k18.5	99	54.079	ENSMZEG00005021214	si:ch211-212k18.5	99	54.021	Maylandia_zebra
ENSAMXG00000010979	si:ch211-212k18.5	73	82.759	ENSMZEG00005012103	sall2	71	82.759	Maylandia_zebra
ENSAMXG00000010979	si:ch211-212k18.5	90	66.510	ENSMMOG00000012726	si:ch211-212k18.5	98	66.510	Mola_mola
ENSAMXG00000010979	si:ch211-212k18.5	97	53.866	ENSMALG00000000979	si:ch211-212k18.5	98	54.286	Monopterus_albus
ENSAMXG00000010979	si:ch211-212k18.5	99	54.691	ENSNBRG00000023948	si:ch211-212k18.5	96	57.439	Neolamprologus_brichardi
ENSAMXG00000010979	si:ch211-212k18.5	94	42.630	ENSNBRG00000017645	sall2	99	41.887	Neolamprologus_brichardi
ENSAMXG00000010979	si:ch211-212k18.5	57	82.759	ENSORLG00000026871	sall2	61	82.759	Oryzias_latipes
ENSAMXG00000010979	si:ch211-212k18.5	99	53.367	ENSORLG00000030429	si:ch211-212k18.5	97	53.176	Oryzias_latipes
ENSAMXG00000010979	si:ch211-212k18.5	57	82.759	ENSORLG00020007873	sall2	58	46.093	Oryzias_latipes_hni
ENSAMXG00000010979	si:ch211-212k18.5	99	52.579	ENSORLG00020008145	si:ch211-212k18.5	97	54.600	Oryzias_latipes_hni
ENSAMXG00000010979	si:ch211-212k18.5	99	52.951	ENSORLG00015004982	si:ch211-212k18.5	95	54.350	Oryzias_latipes_hsok
ENSAMXG00000010979	si:ch211-212k18.5	57	82.759	ENSORLG00015002422	sall2	58	45.889	Oryzias_latipes_hsok
ENSAMXG00000010979	si:ch211-212k18.5	71	64.144	ENSOMEG00000013949	si:ch211-212k18.5	97	53.283	Oryzias_melastigma
ENSAMXG00000010979	si:ch211-212k18.5	58	67.500	ENSOMEG00000012904	sall2	61	82.759	Oryzias_melastigma
ENSAMXG00000010979	si:ch211-212k18.5	71	52.719	ENSPKIG00000009207	sall2	66	53.556	Paramormyrops_kingsleyae
ENSAMXG00000010979	si:ch211-212k18.5	99	52.996	ENSPMGG00000018714	si:ch211-212k18.5	99	54.211	Periophthalmus_magnuspinnatus
ENSAMXG00000010979	si:ch211-212k18.5	99	55.198	ENSPFOG00000023705	si:ch211-212k18.5	100	55.427	Poecilia_formosa
ENSAMXG00000010979	si:ch211-212k18.5	60	81.250	ENSPFOG00000016504	sall2	70	52.381	Poecilia_formosa
ENSAMXG00000010979	si:ch211-212k18.5	99	55.455	ENSPLAG00000002577	si:ch211-212k18.5	95	56.181	Poecilia_latipinna
ENSAMXG00000010979	si:ch211-212k18.5	58	68.293	ENSPLAG00000018320	sall2	70	52.381	Poecilia_latipinna
ENSAMXG00000010979	si:ch211-212k18.5	60	81.250	ENSPMEG00000006335	sall2	69	57.407	Poecilia_mexicana
ENSAMXG00000010979	si:ch211-212k18.5	99	55.298	ENSPMEG00000016395	si:ch211-212k18.5	100	55.445	Poecilia_mexicana
ENSAMXG00000010979	si:ch211-212k18.5	59	81.250	ENSPREG00000021908	sall2	69	57.407	Poecilia_reticulata
ENSAMXG00000010979	si:ch211-212k18.5	99	54.913	ENSPREG00000005292	si:ch211-212k18.5	95	56.518	Poecilia_reticulata
ENSAMXG00000010979	si:ch211-212k18.5	99	54.395	ENSPNYG00000021576	si:ch211-212k18.5	99	54.758	Pundamilia_nyererei
ENSAMXG00000010979	si:ch211-212k18.5	66	75.862	ENSPNAG00000021463	sall2	64	75.862	Pygocentrus_nattereri
ENSAMXG00000010979	si:ch211-212k18.5	100	83.983	ENSPNAG00000006123	si:ch211-212k18.5	100	83.983	Pygocentrus_nattereri
ENSAMXG00000010979	si:ch211-212k18.5	99	56.469	ENSSMAG00000006241	si:ch211-212k18.5	99	56.219	Scophthalmus_maximus
ENSAMXG00000010979	si:ch211-212k18.5	74	86.207	ENSSMAG00000014157	sall2	71	86.207	Scophthalmus_maximus
ENSAMXG00000010979	si:ch211-212k18.5	73	82.759	ENSSDUG00000012274	sall2	69	82.759	Seriola_dumerili
ENSAMXG00000010979	si:ch211-212k18.5	99	56.864	ENSSDUG00000006164	si:ch211-212k18.5	99	57.541	Seriola_dumerili
ENSAMXG00000010979	si:ch211-212k18.5	68	82.759	ENSSLDG00000001653	sall2	69	82.759	Seriola_lalandi_dorsalis
ENSAMXG00000010979	si:ch211-212k18.5	99	57.061	ENSSLDG00000003393	si:ch211-212k18.5	99	57.377	Seriola_lalandi_dorsalis
ENSAMXG00000010979	si:ch211-212k18.5	66	82.759	ENSSPAG00000023009	sall2	68	68.421	Stegastes_partitus
ENSAMXG00000010979	si:ch211-212k18.5	99	56.376	ENSSPAG00000013435	si:ch211-212k18.5	97	57.807	Stegastes_partitus
ENSAMXG00000010979	si:ch211-212k18.5	55	82.759	ENSTRUG00000024556	sall2	63	82.759	Takifugu_rubripes
ENSAMXG00000010979	si:ch211-212k18.5	91	62.256	ENSTRUG00000025082	si:ch211-212k18.5	92	66.069	Takifugu_rubripes
ENSAMXG00000010979	si:ch211-212k18.5	99	53.610	ENSXCOG00000000762	si:ch211-212k18.5	99	55.119	Xiphophorus_couchianus
ENSAMXG00000010979	si:ch211-212k18.5	56	46.294	ENSXMAG00000000902	sall2	69	55.556	Xiphophorus_maculatus
ENSAMXG00000010979	si:ch211-212k18.5	99	53.802	ENSXMAG00000001461	si:ch211-212k18.5	99	54.641	Xiphophorus_maculatus