EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000011046 (Gene tree)
Gene ID: 103038355
Gene Symbol: ovol1a
Alias: ovol1|sb:cb956|zgc:171804
Full Name: ovo like transcriptional repressor 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8458 bases
Position: chr16:31360473-31368930
Accession: 103038355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011352	zf-C2H2	PF00096.26	3.1e-15	1	3
ENSAMXP00000011352	zf-C2H2	PF00096.26	3.1e-15	2	3
ENSAMXP00000011352	zf-C2H2	PF00096.26	3.1e-15	3	3
ENSAMXP00000011352	zf-met	PF12874.7	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011352	-	3692	XM_007248025	ENSAMXP00000011352	325 (aa)	XP_007248087	W5KUU0

Gene Model

Click here to download ENSAMXG00000011046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000011046	ovol1a	98	44.582	ENSAMXG00000041879	ovol1b	88	45.139

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011046	ovol1a	99	72.086	ENSDARG00000076472	ovol1a	100	69.846	Danio_rerio
ENSAMXG00000011046	ovol1a	94	50.649	ENSDARG00000078256	ovol1b	90	53.546	Danio_rerio
ENSAMXG00000011046	ovol1a	99	59.943	ENSELUG00000000343	ovol1a	99	59.884	Esox_lucius
ENSAMXG00000011046	ovol1a	99	58.357	ENSFHEG00000002773	-	99	58.807	Fundulus_heteroclitus
ENSAMXG00000011046	ovol1a	99	50.000	ENSGACG00000018794	ovol1a	99	51.682	Gasterosteus_aculeatus
ENSAMXG00000011046	ovol1a	99	59.366	ENSHCOG00000015860	ovol1a	99	57.849	Hippocampus_comes
ENSAMXG00000011046	ovol1a	99	57.714	ENSKMAG00000002605	-	99	59.026	Kryptolebias_marmoratus
ENSAMXG00000011046	ovol1a	99	56.022	ENSMAMG00000009768	ovol1a	99	56.944	Mastacembelus_armatus
ENSAMXG00000011046	ovol1a	99	57.627	ENSMALG00000008421	ovol1a	99	56.780	Monopterus_albus
ENSAMXG00000011046	ovol1a	94	61.039	ENSPKIG00000024718	ovol1a	99	59.878	Paramormyrops_kingsleyae
ENSAMXG00000011046	ovol1a	99	56.941	ENSPFOG00000008841	-	99	57.507	Poecilia_formosa
ENSAMXG00000011046	ovol1a	93	44.408	ENSPNAG00000016198	ovol1b	93	45.993	Pygocentrus_nattereri
ENSAMXG00000011046	ovol1a	99	86.997	ENSPNAG00000020630	ovol1a	99	86.687	Pygocentrus_nattereri
ENSAMXG00000011046	ovol1a	99	54.372	ENSSDUG00000009846	ovol1a	99	55.647	Seriola_dumerili
ENSAMXG00000011046	ovol1a	65	54.338	ENSXCOG00000006461	-	77	53.604	Xiphophorus_couchianus