EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000011137 (Gene tree)
Gene ID: -
Gene Symbol: znf516
Alias: si:ch211-135j15.1
Full Name: zinc finger protein 516
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 24636 bases
Position: chrAPWO02000132.1:1000657-1025292
Accession: 103032757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011446	zf-C2H2	PF00096.26	1.3e-34	1	5
ENSAMXP00000011446	zf-C2H2	PF00096.26	1.3e-34	2	5
ENSAMXP00000011446	zf-C2H2	PF00096.26	1.3e-34	3	5
ENSAMXP00000011446	zf-C2H2	PF00096.26	1.3e-34	4	5
ENSAMXP00000011446	zf-C2H2	PF00096.26	1.3e-34	5	5
ENSAMXP00000011446	zf-met	PF12874.7	8.4e-08	1	2
ENSAMXP00000011446	zf-met	PF12874.7	8.4e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011446	-	3361	XM_022667361	ENSAMXP00000011446	1120 (aa)	XP_022523082	W5KV34

Gene Model

Click here to download ENSAMXG00000011137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011137's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011137	znf516	99	63.186	ENSDARG00000070809	znf516	99	62.809	Danio_rerio
ENSAMXG00000011137	znf516	99	68.750	ENSIPUG00000003046	znf516	100	68.178	Ictalurus_punctatus
ENSAMXG00000011137	znf516	99	79.676	ENSPNAG00000017286	znf516	99	78.687	Pygocentrus_nattereri