EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000011396 (Gene tree)
Gene ID: -
Gene Symbol: bicc1a
Alias: -
Full Name: protein bicaudal C homolog 1-B-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 59987 bases
Position: chr9:14574706-14634692
Accession: 103029905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011727	KH_1	PF00013.29	3.4e-28	1	2
ENSAMXP00000011727	KH_1	PF00013.29	3.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011727	-	2565	XM_022672761	ENSAMXP00000011727	854 (aa)	XP_022528482	W5KVW5

Gene Model

Click here to download ENSAMXG00000011396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000011396	bicc1a	58	66.154	ENSAMXG00000017167	bicc2	60	66.154
ENSAMXG00000011396	bicc1a	100	55.422	ENSAMXG00000030961	bicc1b	98	55.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011396	bicc1a	100	61.943	ENSG00000122870	BICC1	92	61.943	Homo_sapiens
ENSAMXG00000011396	bicc1a	99	82.946	ENSAPOG00000004667	bicc1a	93	63.200	Acanthochromis_polyacanthus
ENSAMXG00000011396	bicc1a	95	61.538	ENSAMEG00000013342	BICC1	98	61.538	Ailuropoda_melanoleuca
ENSAMXG00000011396	bicc1a	95	84.884	ENSAOCG00000022325	bicc1a	81	84.884	Amphiprion_ocellaris
ENSAMXG00000011396	bicc1a	100	63.710	ENSAPEG00000005966	bicc1a	93	63.710	Amphiprion_percula
ENSAMXG00000011396	bicc1a	99	83.721	ENSATEG00000008634	bicc1a	98	55.599	Anabas_testudineus
ENSAMXG00000011396	bicc1a	92	50.745	ENSAPLG00000015162	BICC1	100	50.532	Anas_platyrhynchos
ENSAMXG00000011396	bicc1a	100	61.789	ENSACAG00000001892	BICC1	81	60.976	Anolis_carolinensis
ENSAMXG00000011396	bicc1a	99	61.943	ENSANAG00000022803	BICC1	94	61.943	Aotus_nancymaae
ENSAMXG00000011396	bicc1a	100	55.577	ENSACLG00000019426	bicc1a	98	55.479	Astatotilapia_calliptera
ENSAMXG00000011396	bicc1a	97	62.753	ENSBTAG00000010694	BICC1	98	62.753	Bos_taurus
ENSAMXG00000011396	bicc1a	100	61.538	ENSCJAG00000010639	BICC1	84	61.538	Callithrix_jacchus
ENSAMXG00000011396	bicc1a	92	61.538	ENSCAFG00000012331	BICC1	99	61.538	Canis_familiaris
ENSAMXG00000011396	bicc1a	100	61.538	ENSCAFG00020026888	BICC1	98	61.538	Canis_lupus_dingo
ENSAMXG00000011396	bicc1a	100	61.943	ENSCHIG00000009725	BICC1	98	61.943	Capra_hircus
ENSAMXG00000011396	bicc1a	99	61.943	ENSTSYG00000004527	BICC1	92	61.943	Carlito_syrichta
ENSAMXG00000011396	bicc1a	72	93.750	ENSCAPG00000014361	BICC1	85	58.974	Cavia_aperea
ENSAMXG00000011396	bicc1a	95	62.348	ENSCPOG00000015585	BICC1	92	62.348	Cavia_porcellus
ENSAMXG00000011396	bicc1a	100	61.943	ENSCCAG00000028110	BICC1	92	61.943	Cebus_capucinus
ENSAMXG00000011396	bicc1a	100	61.943	ENSCATG00000016603	BICC1	92	61.943	Cercocebus_atys
ENSAMXG00000011396	bicc1a	100	61.943	ENSCSAG00000007305	BICC1	92	61.943	Chlorocebus_sabaeus
ENSAMXG00000011396	bicc1a	85	75.000	ENSCHOG00000010828	BICC1	80	75.000	Choloepus_hoffmanni
ENSAMXG00000011396	bicc1a	100	61.538	ENSCPBG00000005820	BICC1	94	61.538	Chrysemys_picta_bellii
ENSAMXG00000011396	bicc1a	66	50.691	ENSCSAVG00000004820	-	70	52.109	Ciona_savignyi
ENSAMXG00000011396	bicc1a	97	61.943	ENSCANG00000037900	BICC1	94	61.943	Colobus_angolensis_palliatus
ENSAMXG00000011396	bicc1a	100	60.729	ENSCGRG00001019138	Bicc1	98	60.729	Cricetulus_griseus_chok1gshd
ENSAMXG00000011396	bicc1a	96	60.729	ENSCGRG00000005736	Bicc1	100	60.729	Cricetulus_griseus_crigri
ENSAMXG00000011396	bicc1a	99	81.538	ENSCSEG00000005038	bicc1a	93	62.400	Cynoglossus_semilaevis
ENSAMXG00000011396	bicc1a	100	64.228	ENSCVAG00000015896	bicc1a	92	64.228	Cyprinodon_variegatus
ENSAMXG00000011396	bicc1a	100	58.593	ENSDARG00000061682	bicc1a	93	81.395	Danio_rerio
ENSAMXG00000011396	bicc1a	95	62.348	ENSDNOG00000009338	BICC1	94	62.348	Dasypus_novemcinctus
ENSAMXG00000011396	bicc1a	100	62.348	ENSDORG00000011450	Bicc1	98	62.348	Dipodomys_ordii
ENSAMXG00000011396	bicc1a	93	55.072	ENSETEG00000010754	BICC1	81	55.072	Echinops_telfairi
ENSAMXG00000011396	bicc1a	69	48.593	ENSEBUG00000016015	-	87	47.630	Eptatretus_burgeri
ENSAMXG00000011396	bicc1a	82	73.188	ENSEEUG00000001269	BICC1	66	73.188	Erinaceus_europaeus
ENSAMXG00000011396	bicc1a	99	80.597	ENSELUG00000005613	bicc1a	84	80.597	Esox_lucius
ENSAMXG00000011396	bicc1a	100	61.538	ENSFCAG00000006211	BICC1	84	61.538	Felis_catus
ENSAMXG00000011396	bicc1a	95	62.857	ENSFALG00000002247	BICC1	100	62.857	Ficedula_albicollis
ENSAMXG00000011396	bicc1a	95	62.348	ENSFDAG00000016201	BICC1	98	62.348	Fukomys_damarensis
ENSAMXG00000011396	bicc1a	100	64.634	ENSFHEG00000022447	bicc1a	92	64.634	Fundulus_heteroclitus
ENSAMXG00000011396	bicc1a	100	53.915	ENSGMOG00000018749	bicc1a	97	54.266	Gadus_morhua
ENSAMXG00000011396	bicc1a	100	50.730	ENSGALG00000036095	BICC1	97	50.830	Gallus_gallus
ENSAMXG00000011396	bicc1a	95	60.488	ENSGAFG00000012165	bicc1a	90	61.463	Gambusia_affinis
ENSAMXG00000011396	bicc1a	100	61.508	ENSGACG00000010043	bicc1a	92	61.508	Gasterosteus_aculeatus
ENSAMXG00000011396	bicc1a	98	61.538	ENSGAGG00000012189	BICC1	93	61.538	Gopherus_agassizii
ENSAMXG00000011396	bicc1a	100	61.943	ENSGGOG00000005484	BICC1	93	61.943	Gorilla_gorilla
ENSAMXG00000011396	bicc1a	100	55.676	ENSHBUG00000016079	bicc1a	98	55.577	Haplochromis_burtoni
ENSAMXG00000011396	bicc1a	97	59.276	ENSHGLG00000005632	-	98	59.276	Heterocephalus_glaber_female
ENSAMXG00000011396	bicc1a	100	62.348	ENSHGLG00100015631	-	98	62.348	Heterocephalus_glaber_male
ENSAMXG00000011396	bicc1a	99	83.721	ENSHCOG00000017407	bicc1a	87	83.721	Hippocampus_comes
ENSAMXG00000011396	bicc1a	93	62.031	ENSIPUG00000008467	bicc1	95	63.147	Ictalurus_punctatus
ENSAMXG00000011396	bicc1a	99	63.158	ENSSTOG00000000168	BICC1	100	61.943	Ictidomys_tridecemlineatus
ENSAMXG00000011396	bicc1a	99	80.620	ENSKMAG00000000780	bicc1a	87	80.620	Kryptolebias_marmoratus
ENSAMXG00000011396	bicc1a	100	62.800	ENSLBEG00000021160	bicc1a	93	62.800	Labrus_bergylta
ENSAMXG00000011396	bicc1a	92	63.563	ENSLACG00000010091	BICC1	99	48.191	Latimeria_chalumnae
ENSAMXG00000011396	bicc1a	100	64.372	ENSLOCG00000006500	bicc1a	93	64.372	Lepisosteus_oculatus
ENSAMXG00000011396	bicc1a	92	62.348	ENSLAFG00000007749	BICC1	93	62.348	Loxodonta_africana
ENSAMXG00000011396	bicc1a	100	61.943	ENSMFAG00000036177	BICC1	93	61.943	Macaca_fascicularis
ENSAMXG00000011396	bicc1a	95	61.943	ENSMMUG00000015750	BICC1	92	59.276	Macaca_mulatta
ENSAMXG00000011396	bicc1a	100	61.943	ENSMNEG00000009601	BICC1	92	61.943	Macaca_nemestrina
ENSAMXG00000011396	bicc1a	100	61.943	ENSMLEG00000040006	BICC1	93	61.943	Mandrillus_leucophaeus
ENSAMXG00000011396	bicc1a	99	83.721	ENSMAMG00000016363	bicc1a	93	63.600	Mastacembelus_armatus
ENSAMXG00000011396	bicc1a	100	55.577	ENSMZEG00005027431	bicc1a	98	55.479	Maylandia_zebra
ENSAMXG00000011396	bicc1a	92	62.195	ENSMGAG00000002729	BICC1	94	62.195	Meleagris_gallopavo
ENSAMXG00000011396	bicc1a	100	60.729	ENSMAUG00000018772	Bicc1	92	60.324	Mesocricetus_auratus
ENSAMXG00000011396	bicc1a	100	61.943	ENSMICG00000002045	BICC1	92	61.943	Microcebus_murinus
ENSAMXG00000011396	bicc1a	100	61.134	ENSMOCG00000020143	Bicc1	98	61.134	Microtus_ochrogaster
ENSAMXG00000011396	bicc1a	100	54.646	ENSMMOG00000008063	bicc1a	98	54.352	Mola_mola
ENSAMXG00000011396	bicc1a	97	60.181	ENSMODG00000016125	BICC1	81	60.181	Monodelphis_domestica
ENSAMXG00000011396	bicc1a	99	82.171	ENSMALG00000019124	bicc1a	93	62.800	Monopterus_albus
ENSAMXG00000011396	bicc1a	100	60.081	MGP_CAROLIEiJ_G0015426	Bicc1	98	60.081	Mus_caroli
ENSAMXG00000011396	bicc1a	100	60.484	ENSMUSG00000014329	Bicc1	98	60.484	Mus_musculus
ENSAMXG00000011396	bicc1a	100	60.081	MGP_PahariEiJ_G0030842	Bicc1	98	60.081	Mus_pahari
ENSAMXG00000011396	bicc1a	100	60.484	MGP_SPRETEiJ_G0016239	Bicc1	98	60.484	Mus_spretus
ENSAMXG00000011396	bicc1a	89	48.804	ENSMPUG00000010431	BICC1	93	48.622	Mustela_putorius_furo
ENSAMXG00000011396	bicc1a	92	50.371	ENSMLUG00000005170	BICC1	98	49.947	Myotis_lucifugus
ENSAMXG00000011396	bicc1a	100	61.538	ENSNGAG00000023605	Bicc1	92	61.538	Nannospalax_galili
ENSAMXG00000011396	bicc1a	100	62.500	ENSNBRG00000015387	bicc1a	93	62.903	Neolamprologus_brichardi
ENSAMXG00000011396	bicc1a	100	61.943	ENSNLEG00000012284	BICC1	92	61.943	Nomascus_leucogenys
ENSAMXG00000011396	bicc1a	60	62.242	ENSOPRG00000009804	-	64	61.947	Ochotona_princeps
ENSAMXG00000011396	bicc1a	100	61.943	ENSODEG00000000545	BICC1	98	61.943	Octodon_degus
ENSAMXG00000011396	bicc1a	100	62.948	ENSONIG00000000620	bicc1a	98	62.948	Oreochromis_niloticus
ENSAMXG00000011396	bicc1a	89	60.000	ENSOANG00000013223	BICC1	87	60.000	Ornithorhynchus_anatinus
ENSAMXG00000011396	bicc1a	97	59.276	ENSOCUG00000013696	BICC1	98	59.276	Oryctolagus_cuniculus
ENSAMXG00000011396	bicc1a	100	55.292	ENSORLG00000005313	bicc1a	92	80.620	Oryzias_latipes
ENSAMXG00000011396	bicc1a	100	55.490	ENSORLG00020010305	bicc1a	98	54.896	Oryzias_latipes_hni
ENSAMXG00000011396	bicc1a	100	55.094	ENSORLG00015015393	bicc1a	92	80.620	Oryzias_latipes_hsok
ENSAMXG00000011396	bicc1a	100	55.687	ENSOMEG00000009659	bicc1a	98	56.083	Oryzias_melastigma
ENSAMXG00000011396	bicc1a	100	61.943	ENSOGAG00000000304	BICC1	92	61.943	Otolemur_garnettii
ENSAMXG00000011396	bicc1a	100	61.943	ENSOARG00000004086	BICC1	98	61.943	Ovis_aries
ENSAMXG00000011396	bicc1a	100	61.943	ENSPPAG00000035110	BICC1	94	61.943	Pan_paniscus
ENSAMXG00000011396	bicc1a	100	61.943	ENSPTRG00000002520	BICC1	90	61.943	Pan_troglodytes
ENSAMXG00000011396	bicc1a	99	62.500	ENSPKIG00000025290	bicc1b	91	62.500	Paramormyrops_kingsleyae
ENSAMXG00000011396	bicc1a	95	61.943	ENSPSIG00000009802	BICC1	94	61.943	Pelodiscus_sinensis
ENSAMXG00000011396	bicc1a	91	63.395	ENSPMGG00000004168	bicc1a	92	63.395	Periophthalmus_magnuspinnatus
ENSAMXG00000011396	bicc1a	100	60.729	ENSPEMG00000014055	Bicc1	99	60.729	Peromyscus_maniculatus_bairdii
ENSAMXG00000011396	bicc1a	87	48.932	ENSPMAG00000005468	-	99	42.424	Petromyzon_marinus
ENSAMXG00000011396	bicc1a	100	63.563	ENSPCIG00000028868	BICC1	92	63.563	Phascolarctos_cinereus
ENSAMXG00000011396	bicc1a	100	63.306	ENSPFOG00000018348	bicc1a	92	63.306	Poecilia_formosa
ENSAMXG00000011396	bicc1a	100	63.821	ENSPLAG00000010377	bicc1a	92	63.821	Poecilia_latipinna
ENSAMXG00000011396	bicc1a	100	63.306	ENSPMEG00000020413	bicc1a	92	63.306	Poecilia_mexicana
ENSAMXG00000011396	bicc1a	81	77.358	ENSPREG00000010793	bicc1a	84	76.923	Poecilia_reticulata
ENSAMXG00000011396	bicc1a	95	61.943	ENSPPYG00000002429	BICC1	91	61.943	Pongo_abelii
ENSAMXG00000011396	bicc1a	100	60.729	ENSPCAG00000007197	BICC1	85	60.729	Procavia_capensis
ENSAMXG00000011396	bicc1a	100	61.943	ENSPCOG00000028597	BICC1	92	61.943	Propithecus_coquereli
ENSAMXG00000011396	bicc1a	87	79.747	ENSPVAG00000008004	BICC1	81	79.747	Pteropus_vampyrus
ENSAMXG00000011396	bicc1a	100	55.479	ENSPNYG00000002818	bicc1a	98	55.380	Pundamilia_nyererei
ENSAMXG00000011396	bicc1a	100	54.142	ENSPNAG00000019026	bicc1b	98	54.474	Pygocentrus_nattereri
ENSAMXG00000011396	bicc1a	95	78.400	ENSPNAG00000026738	bicc1a	99	78.857	Pygocentrus_nattereri
ENSAMXG00000011396	bicc1a	95	60.000	ENSRNOG00000000614	Bicc1	94	60.000	Rattus_norvegicus
ENSAMXG00000011396	bicc1a	95	61.943	ENSRROG00000017888	BICC1	94	61.943	Rhinopithecus_roxellana
ENSAMXG00000011396	bicc1a	100	61.943	ENSSBOG00000029991	BICC1	94	61.943	Saimiri_boliviensis_boliviensis
ENSAMXG00000011396	bicc1a	95	63.158	ENSSHAG00000011416	BICC1	94	63.158	Sarcophilus_harrisii
ENSAMXG00000011396	bicc1a	100	52.525	ENSSFOG00015008406	BICC1	97	53.327	Scleropages_formosus
ENSAMXG00000011396	bicc1a	100	64.113	ENSSMAG00000017028	bicc1a	94	63.200	Scophthalmus_maximus
ENSAMXG00000011396	bicc1a	99	83.721	ENSSDUG00000017080	bicc1a	93	63.600	Seriola_dumerili
ENSAMXG00000011396	bicc1a	95	83.721	ENSSLDG00000015619	bicc1a	94	63.600	Seriola_lalandi_dorsalis
ENSAMXG00000011396	bicc1a	95	61.943	ENSSARG00000011303	BICC1	98	61.943	Sorex_araneus
ENSAMXG00000011396	bicc1a	100	82.946	ENSSPAG00000015300	bicc1a	81	82.946	Stegastes_partitus
ENSAMXG00000011396	bicc1a	100	61.943	ENSSSCG00000010204	BICC1	97	58.824	Sus_scrofa
ENSAMXG00000011396	bicc1a	95	62.195	ENSTGUG00000005584	BICC1	98	55.631	Taeniopygia_guttata
ENSAMXG00000011396	bicc1a	100	64.516	ENSTRUG00000008560	bicc1a	93	64.516	Takifugu_rubripes
ENSAMXG00000011396	bicc1a	97	50.554	ENSTNIG00000017029	-	94	64.634	Tetraodon_nigroviridis
ENSAMXG00000011396	bicc1a	100	65.041	ENSTNIG00000019377	bicc1a	93	65.041	Tetraodon_nigroviridis
ENSAMXG00000011396	bicc1a	58	72.973	ENSTBEG00000012202	BICC1	58	77.273	Tupaia_belangeri
ENSAMXG00000011396	bicc1a	95	60.729	ENSTTRG00000017309	BICC1	98	60.729	Tursiops_truncatus
ENSAMXG00000011396	bicc1a	97	61.538	ENSUMAG00000006522	BICC1	95	61.538	Ursus_maritimus
ENSAMXG00000011396	bicc1a	59	73.188	ENSVPAG00000008214	BICC1	50	73.188	Vicugna_pacos
ENSAMXG00000011396	bicc1a	100	61.538	ENSVVUG00000008341	BICC1	98	61.538	Vulpes_vulpes
ENSAMXG00000011396	bicc1a	79	47.362	ENSXETG00000005117	bicc1	89	45.554	Xenopus_tropicalis
ENSAMXG00000011396	bicc1a	100	63.821	ENSXMAG00000007368	bicc1a	92	63.821	Xiphophorus_maculatus