EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000011411 (Gene tree)
Gene ID: 103039240
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 26364 bases
Position: chr6:39373755-39400118
Accession: 103039240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011735	MMR_HSR1	PF01926.23	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011735	-	4970	XM_007237430	ENSAMXP00000011735	724 (aa)	XP_007237492	W5KVX3

Gene Model

Click here to download ENSAMXG00000011411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000011411	rasef	97	37.975	ENSAMXG00000007430	zgc:162879	99	37.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011411	rasef	97	51.973	ENSG00000165105	RASEF	98	52.180	Homo_sapiens
ENSAMXG00000011411	rasef	97	53.686	ENSAPOG00000024369	rasef	99	57.295	Acanthochromis_polyacanthus
ENSAMXG00000011411	rasef	96	53.014	ENSAMEG00000009467	RASEF	98	52.740	Ailuropoda_melanoleuca
ENSAMXG00000011411	rasef	92	53.767	ENSACIG00000005549	rasef	97	53.619	Amphilophus_citrinellus
ENSAMXG00000011411	rasef	97	55.274	ENSAOCG00000011464	rasef	95	55.274	Amphiprion_ocellaris
ENSAMXG00000011411	rasef	97	56.967	ENSAPEG00000003461	rasef	99	56.545	Amphiprion_percula
ENSAMXG00000011411	rasef	92	57.307	ENSATEG00000015032	rasef	99	57.554	Anabas_testudineus
ENSAMXG00000011411	rasef	83	53.639	ENSAPLG00000013969	RASEF	98	53.956	Anas_platyrhynchos
ENSAMXG00000011411	rasef	97	53.591	ENSACAG00000002155	RASEF	99	53.389	Anolis_carolinensis
ENSAMXG00000011411	rasef	97	53.406	ENSANAG00000035226	RASEF	98	52.997	Aotus_nancymaae
ENSAMXG00000011411	rasef	97	57.953	ENSACLG00000017818	rasef	98	57.953	Astatotilapia_calliptera
ENSAMXG00000011411	rasef	97	53.333	ENSBTAG00000021751	RASEF	98	53.197	Bos_taurus
ENSAMXG00000011411	rasef	97	52.725	ENSCJAG00000003547	RASEF	98	52.374	Callithrix_jacchus
ENSAMXG00000011411	rasef	98	51.867	ENSCAFG00020023859	RASEF	99	52.133	Canis_lupus_dingo
ENSAMXG00000011411	rasef	97	52.917	ENSCHIG00000020336	RASEF	96	56.699	Capra_hircus
ENSAMXG00000011411	rasef	71	55.303	ENSTSYG00000006987	RASEF	99	55.303	Carlito_syrichta
ENSAMXG00000011411	rasef	68	49.597	ENSCAPG00000010585	-	99	49.597	Cavia_aperea
ENSAMXG00000011411	rasef	82	55.500	ENSCPOG00000005004	RASEF	99	55.500	Cavia_porcellus
ENSAMXG00000011411	rasef	97	52.997	ENSCCAG00000031624	RASEF	98	52.725	Cebus_capucinus
ENSAMXG00000011411	rasef	61	50.000	ENSCLAG00000004622	-	93	50.000	Chinchilla_lanigera
ENSAMXG00000011411	rasef	98	52.639	ENSCSAG00000007663	RASEF	99	52.639	Chlorocebus_sabaeus
ENSAMXG00000011411	rasef	80	55.312	ENSCHOG00000001831	RASEF	96	55.312	Choloepus_hoffmanni
ENSAMXG00000011411	rasef	98	53.103	ENSCPBG00000019037	RASEF	99	53.103	Chrysemys_picta_bellii
ENSAMXG00000011411	rasef	98	51.617	ENSCANG00000034081	RASEF	99	51.887	Colobus_angolensis_palliatus
ENSAMXG00000011411	rasef	81	56.645	ENSCGRG00001001324	Rasef	99	56.645	Cricetulus_griseus_chok1gshd
ENSAMXG00000011411	rasef	77	56.085	ENSCGRG00000006455	Rasef	99	56.085	Cricetulus_griseus_crigri
ENSAMXG00000011411	rasef	89	51.891	ENSCSEG00000017898	rasef	91	51.437	Cynoglossus_semilaevis
ENSAMXG00000011411	rasef	99	58.621	ENSCVAG00000006168	rasef	94	58.621	Cyprinodon_variegatus
ENSAMXG00000011411	rasef	98	71.488	ENSDARG00000076250	rasef	99	71.349	Danio_rerio
ENSAMXG00000011411	rasef	97	54.076	ENSDNOG00000006002	RASEF	89	53.804	Dasypus_novemcinctus
ENSAMXG00000011411	rasef	75	55.277	ENSDORG00000015570	Rasef	99	55.197	Dipodomys_ordii
ENSAMXG00000011411	rasef	93	42.857	ENSEBUG00000012629	rasef	99	42.623	Eptatretus_burgeri
ENSAMXG00000011411	rasef	77	38.514	ENSEBUG00000012179	rasef	96	38.514	Eptatretus_burgeri
ENSAMXG00000011411	rasef	97	55.259	ENSEASG00005015967	RASEF	98	57.307	Equus_asinus_asinus
ENSAMXG00000011411	rasef	97	55.680	ENSECAG00000000324	RASEF	98	57.401	Equus_caballus
ENSAMXG00000011411	rasef	77	49.206	ENSEEUG00000008455	RASEF	99	49.206	Erinaceus_europaeus
ENSAMXG00000011411	rasef	97	53.397	ENSFCAG00000002416	RASEF	98	53.668	Felis_catus
ENSAMXG00000011411	rasef	82	55.122	ENSFALG00000003611	RASEF	99	55.447	Ficedula_albicollis
ENSAMXG00000011411	rasef	82	56.788	ENSFDAG00000013428	RASEF	99	56.788	Fukomys_damarensis
ENSAMXG00000011411	rasef	92	55.947	ENSFHEG00000022470	rasef	90	55.507	Fundulus_heteroclitus
ENSAMXG00000011411	rasef	81	81.657	ENSGMOG00000010090	rasef	98	54.383	Gadus_morhua
ENSAMXG00000011411	rasef	98	53.061	ENSGALG00000012576	RASEF	99	53.252	Gallus_gallus
ENSAMXG00000011411	rasef	97	57.322	ENSGAFG00000013735	rasef	96	56.904	Gambusia_affinis
ENSAMXG00000011411	rasef	98	55.495	ENSGACG00000007528	rasef	99	55.082	Gasterosteus_aculeatus
ENSAMXG00000011411	rasef	98	52.974	ENSGAGG00000007338	RASEF	100	53.846	Gopherus_agassizii
ENSAMXG00000011411	rasef	97	52.109	ENSGGOG00000006651	RASEF	98	52.180	Gorilla_gorilla
ENSAMXG00000011411	rasef	97	57.953	ENSHBUG00000010345	rasef	93	57.953	Haplochromis_burtoni
ENSAMXG00000011411	rasef	98	53.053	ENSHGLG00000000399	RASEF	99	52.646	Heterocephalus_glaber_female
ENSAMXG00000011411	rasef	82	56.716	ENSHGLG00100008043	RASEF	99	56.716	Heterocephalus_glaber_male
ENSAMXG00000011411	rasef	97	53.182	ENSHCOG00000010976	rasef	98	52.514	Hippocampus_comes
ENSAMXG00000011411	rasef	99	70.259	ENSIPUG00000008768	rasef	99	70.259	Ictalurus_punctatus
ENSAMXG00000011411	rasef	97	51.837	ENSSTOG00000004311	RASEF	98	52.374	Ictidomys_tridecemlineatus
ENSAMXG00000011411	rasef	82	56.551	ENSJJAG00000023215	Rasef	99	56.457	Jaculus_jaculus
ENSAMXG00000011411	rasef	97	55.645	ENSKMAG00000021106	rasef	87	55.973	Kryptolebias_marmoratus
ENSAMXG00000011411	rasef	98	53.121	ENSLBEG00000021098	-	99	53.121	Labrus_bergylta
ENSAMXG00000011411	rasef	96	56.606	ENSLACG00000010849	RASEF	98	56.745	Latimeria_chalumnae
ENSAMXG00000011411	rasef	97	59.693	ENSLOCG00000002094	rasef	98	59.693	Lepisosteus_oculatus
ENSAMXG00000011411	rasef	82	56.436	ENSLAFG00000010552	RASEF	99	56.436	Loxodonta_africana
ENSAMXG00000011411	rasef	98	52.490	ENSMFAG00000046414	RASEF	99	52.624	Macaca_fascicularis
ENSAMXG00000011411	rasef	98	52.279	ENSMNEG00000044341	RASEF	99	52.413	Macaca_nemestrina
ENSAMXG00000011411	rasef	98	52.355	ENSMLEG00000034579	RASEF	99	52.490	Mandrillus_leucophaeus
ENSAMXG00000011411	rasef	83	55.766	ENSMAMG00000001536	rasef	95	56.082	Mastacembelus_armatus
ENSAMXG00000011411	rasef	93	53.519	ENSMZEG00005004819	rasef	98	53.519	Maylandia_zebra
ENSAMXG00000011411	rasef	82	56.529	ENSMAUG00000010820	Rasef	99	56.529	Mesocricetus_auratus
ENSAMXG00000011411	rasef	96	53.297	ENSMICG00000011836	RASEF	99	53.012	Microcebus_murinus
ENSAMXG00000011411	rasef	83	55.844	ENSMOCG00000000943	Rasef	99	55.420	Microtus_ochrogaster
ENSAMXG00000011411	rasef	92	55.102	ENSMMOG00000000102	rasef	95	54.599	Mola_mola
ENSAMXG00000011411	rasef	98	53.510	ENSMODG00000009037	RASEF	99	53.662	Monodelphis_domestica
ENSAMXG00000011411	rasef	95	54.830	ENSMALG00000009830	rasef	97	54.545	Monopterus_albus
ENSAMXG00000011411	rasef	85	55.040	MGP_CAROLIEiJ_G0026109	Rasef	99	55.556	Mus_caroli
ENSAMXG00000011411	rasef	97	53.933	ENSMUSG00000043003	Rasef	99	55.732	Mus_musculus
ENSAMXG00000011411	rasef	85	55.040	MGP_PahariEiJ_G0028447	Rasef	99	55.556	Mus_pahari
ENSAMXG00000011411	rasef	85	54.720	MGP_SPRETEiJ_G0027075	Rasef	99	55.026	Mus_spretus
ENSAMXG00000011411	rasef	76	54.867	ENSMPUG00000013070	RASEF	99	54.867	Mustela_putorius_furo
ENSAMXG00000011411	rasef	97	53.333	ENSMLUG00000013108	RASEF	98	53.469	Myotis_lucifugus
ENSAMXG00000011411	rasef	77	55.732	ENSNGAG00000014878	Rasef	99	55.732	Nannospalax_galili
ENSAMXG00000011411	rasef	94	53.295	ENSNBRG00000012335	rasef	99	53.085	Neolamprologus_brichardi
ENSAMXG00000011411	rasef	97	52.381	ENSNLEG00000003245	RASEF	98	52.316	Nomascus_leucogenys
ENSAMXG00000011411	rasef	97	53.045	ENSMEUG00000016412	RASEF	98	52.639	Notamacropus_eugenii
ENSAMXG00000011411	rasef	89	56.000	ENSOPRG00000002742	-	87	56.000	Ochotona_princeps
ENSAMXG00000011411	rasef	97	58.587	ENSONIG00000015021	rasef	99	58.392	Oreochromis_niloticus
ENSAMXG00000011411	rasef	97	52.151	ENSOANG00000010379	RASEF	98	52.016	Ornithorhynchus_anatinus
ENSAMXG00000011411	rasef	97	52.304	ENSOCUG00000001548	RASEF	98	52.997	Oryctolagus_cuniculus
ENSAMXG00000011411	rasef	99	56.410	ENSORLG00000005076	rasef	93	56.410	Oryzias_latipes
ENSAMXG00000011411	rasef	99	56.410	ENSORLG00020020049	rasef	93	56.410	Oryzias_latipes_hni
ENSAMXG00000011411	rasef	99	56.680	ENSORLG00015008479	rasef	93	56.410	Oryzias_latipes_hsok
ENSAMXG00000011411	rasef	99	56.005	ENSOMEG00000023457	rasef	98	56.919	Oryzias_melastigma
ENSAMXG00000011411	rasef	82	56.931	ENSOGAG00000012724	RASEF	99	56.931	Otolemur_garnettii
ENSAMXG00000011411	rasef	97	53.324	ENSOARG00000009073	RASEF	92	53.324	Ovis_aries
ENSAMXG00000011411	rasef	97	53.868	ENSPPAG00000042152	RASEF	98	53.868	Pan_paniscus
ENSAMXG00000011411	rasef	97	53.605	ENSPPRG00000008487	RASEF	98	53.469	Panthera_pardus
ENSAMXG00000011411	rasef	84	57.624	ENSPTIG00000006676	RASEF	96	55.513	Panthera_tigris_altaica
ENSAMXG00000011411	rasef	97	53.727	ENSPTRG00000021052	RASEF	98	53.727	Pan_troglodytes
ENSAMXG00000011411	rasef	98	52.490	ENSPANG00000024899	RASEF	99	52.221	Papio_anubis
ENSAMXG00000011411	rasef	83	54.589	ENSPSIG00000017699	RASEF	96	54.984	Pelodiscus_sinensis
ENSAMXG00000011411	rasef	97	47.361	ENSPMGG00000015499	rasef	86	86.275	Periophthalmus_magnuspinnatus
ENSAMXG00000011411	rasef	82	56.694	ENSPEMG00000002797	Rasef	99	56.694	Peromyscus_maniculatus_bairdii
ENSAMXG00000011411	rasef	93	40.676	ENSPMAG00000001634	rasef	99	40.805	Petromyzon_marinus
ENSAMXG00000011411	rasef	98	54.133	ENSPCIG00000027655	RASEF	99	54.000	Phascolarctos_cinereus
ENSAMXG00000011411	rasef	97	56.635	ENSPFOG00000018924	rasef	98	56.224	Poecilia_formosa
ENSAMXG00000011411	rasef	81	55.629	ENSPLAG00000022907	RASEF	97	55.629	Poecilia_latipinna
ENSAMXG00000011411	rasef	97	57.880	ENSPMEG00000006546	rasef	98	57.462	Poecilia_mexicana
ENSAMXG00000011411	rasef	97	59.649	ENSPREG00000018728	rasef	91	59.649	Poecilia_reticulata
ENSAMXG00000011411	rasef	97	51.973	ENSPPYG00000019320	RASEF	99	51.535	Pongo_abelii
ENSAMXG00000011411	rasef	97	52.767	ENSPCOG00000022979	RASEF	98	52.767	Propithecus_coquereli
ENSAMXG00000011411	rasef	97	52.901	ENSPVAG00000003682	RASEF	98	53.306	Pteropus_vampyrus
ENSAMXG00000011411	rasef	92	56.934	ENSPNYG00000010579	rasef	93	56.934	Pundamilia_nyererei
ENSAMXG00000011411	rasef	98	83.776	ENSPNAG00000016447	rasef	100	83.636	Pygocentrus_nattereri
ENSAMXG00000011411	rasef	97	53.576	ENSRNOG00000024190	Rasef	98	53.296	Rattus_norvegicus
ENSAMXG00000011411	rasef	98	51.482	ENSRBIG00000039516	RASEF	99	51.752	Rhinopithecus_bieti
ENSAMXG00000011411	rasef	93	52.468	ENSRROG00000044397	RASEF	99	52.750	Rhinopithecus_roxellana
ENSAMXG00000011411	rasef	97	52.044	ENSSBOG00000029298	RASEF	98	51.635	Saimiri_boliviensis_boliviensis
ENSAMXG00000011411	rasef	98	60.417	ENSSFOG00015009014	rasef	99	60.417	Scleropages_formosus
ENSAMXG00000011411	rasef	93	56.454	ENSSMAG00000000942	rasef	94	56.170	Scophthalmus_maximus
ENSAMXG00000011411	rasef	91	47.941	ENSSDUG00000022228	rasef	86	59.164	Seriola_dumerili
ENSAMXG00000011411	rasef	94	55.367	ENSSLDG00000001784	rasef	88	55.226	Seriola_lalandi_dorsalis
ENSAMXG00000011411	rasef	98	51.307	ENSSPUG00000002899	RASEF	100	51.307	Sphenodon_punctatus
ENSAMXG00000011411	rasef	98	55.218	ENSSPAG00000002442	rasef	94	55.350	Stegastes_partitus
ENSAMXG00000011411	rasef	84	58.360	ENSSSCG00000040707	-	92	58.360	Sus_scrofa
ENSAMXG00000011411	rasef	98	51.230	ENSTGUG00000003216	RASEF	99	51.503	Taeniopygia_guttata
ENSAMXG00000011411	rasef	97	56.172	ENSTRUG00000011541	rasef	98	55.617	Takifugu_rubripes
ENSAMXG00000011411	rasef	99	51.688	ENSTNIG00000006010	rasef	99	52.016	Tetraodon_nigroviridis
ENSAMXG00000011411	rasef	97	48.163	ENSTTRG00000002061	RASEF	98	48.435	Tursiops_truncatus
ENSAMXG00000011411	rasef	97	54.062	ENSUAMG00000021591	RASEF	97	56.436	Ursus_americanus
ENSAMXG00000011411	rasef	82	56.271	ENSUMAG00000004670	RASEF	94	56.271	Ursus_maritimus
ENSAMXG00000011411	rasef	82	56.271	ENSVVUG00000029736	RASEF	97	56.086	Vulpes_vulpes
ENSAMXG00000011411	rasef	98	52.432	ENSXETG00000016758	mgc147600	100	51.892	Xenopus_tropicalis
ENSAMXG00000011411	rasef	81	52.254	ENSXCOG00000005178	rasef	87	52.254	Xiphophorus_couchianus
ENSAMXG00000011411	rasef	97	56.944	ENSXMAG00000015129	rasef	99	56.528	Xiphophorus_maculatus