EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000011435 (Gene tree)
Gene ID: 103044432
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 23012 bases
Position: chr2:16014115-16037126
Accession: 103044432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037127	ResIII	PF04851.15	1.2e-06	1	1
ENSAMXP00000011894	ResIII	PF04851.15	3.2e-06	1	1
ENSAMXP00000011894	DEAD	PF00270.29	2.1e-49	1	1
ENSAMXP00000037127	DEAD	PF00270.29	2.1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011894	-	2814	-	ENSAMXP00000011894	937 (aa)	-	W5KWD2
ENSAMXT00000036524	-	6647	XM_022677092	ENSAMXP00000037127	943 (aa)	XP_022532813	UPI000BBD7A7E

Gene Model

Click here to download ENSAMXG00000011435's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000011435	ddx42	69	38.939	ENSAMXG00000008413	ddx46	53	42.781
ENSAMXG00000011435	ddx42	50	36.420	ENSAMXG00000032415	ddx3xa	73	34.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011435	ddx42	99	69.097	ENSG00000198231	DDX42	98	81.633	Homo_sapiens
ENSAMXG00000011435	ddx42	89	81.734	ENSAPOG00000017675	ddx42	89	81.896	Acanthochromis_polyacanthus
ENSAMXG00000011435	ddx42	100	71.113	ENSAMEG00000003200	DDX42	80	80.871	Ailuropoda_melanoleuca
ENSAMXG00000011435	ddx42	74	80.641	ENSACIG00000007376	ddx42	88	81.108	Amphilophus_citrinellus
ENSAMXG00000011435	ddx42	100	77.513	ENSAOCG00000003520	ddx42	87	82.017	Amphiprion_ocellaris
ENSAMXG00000011435	ddx42	100	77.259	ENSAPEG00000000984	ddx42	87	82.217	Amphiprion_percula
ENSAMXG00000011435	ddx42	100	75.280	ENSATEG00000022920	ddx42	88	80.981	Anabas_testudineus
ENSAMXG00000011435	ddx42	100	69.678	ENSAPLG00000010544	DDX42	78	81.344	Anas_platyrhynchos
ENSAMXG00000011435	ddx42	99	70.242	ENSACAG00000003994	DDX42	77	81.044	Anolis_carolinensis
ENSAMXG00000011435	ddx42	99	70.094	ENSANAG00000035693	DDX42	89	83.917	Aotus_nancymaae
ENSAMXG00000011435	ddx42	89	80.947	ENSACLG00000025113	ddx42	97	75.108	Astatotilapia_calliptera
ENSAMXG00000011435	ddx42	100	69.168	ENSBTAG00000021058	DDX42	88	82.671	Bos_taurus
ENSAMXG00000011435	ddx42	65	51.149	WBGene00008119	C46F11.4	81	51.286	Caenorhabditis_elegans
ENSAMXG00000011435	ddx42	99	70.607	ENSCJAG00000019649	DDX42	94	81.310	Callithrix_jacchus
ENSAMXG00000011435	ddx42	100	70.031	ENSCAFG00000012818	DDX42	80	79.420	Canis_familiaris
ENSAMXG00000011435	ddx42	100	70.134	ENSCAFG00020026631	DDX42	81	81.003	Canis_lupus_dingo
ENSAMXG00000011435	ddx42	100	70.113	ENSCHIG00000014431	DDX42	83	81.398	Capra_hircus
ENSAMXG00000011435	ddx42	100	69.722	ENSTSYG00000001380	DDX42	80	80.845	Carlito_syrichta
ENSAMXG00000011435	ddx42	73	59.490	ENSCAPG00000013621	DDX42	83	64.474	Cavia_aperea
ENSAMXG00000011435	ddx42	100	69.678	ENSCPOG00000005633	DDX42	81	79.288	Cavia_porcellus
ENSAMXG00000011435	ddx42	100	64.628	ENSCCAG00000020612	DDX42	88	83.917	Cebus_capucinus
ENSAMXG00000011435	ddx42	99	70.485	ENSCATG00000030490	DDX42	82	83.917	Cercocebus_atys
ENSAMXG00000011435	ddx42	100	70.124	ENSCLAG00000003497	DDX42	78	80.926	Chinchilla_lanigera
ENSAMXG00000011435	ddx42	99	66.599	ENSCSAG00000003914	DDX42	80	76.247	Chlorocebus_sabaeus
ENSAMXG00000011435	ddx42	62	86.607	ENSCHOG00000006241	DDX42	61	90.385	Choloepus_hoffmanni
ENSAMXG00000011435	ddx42	99	69.459	ENSCPBG00000026682	DDX42	76	81.233	Chrysemys_picta_bellii
ENSAMXG00000011435	ddx42	99	70.382	ENSCANG00000034663	DDX42	90	83.994	Colobus_angolensis_palliatus
ENSAMXG00000011435	ddx42	100	69.948	ENSCGRG00001009775	Ddx42	81	79.657	Cricetulus_griseus_chok1gshd
ENSAMXG00000011435	ddx42	100	69.948	ENSCGRG00000011718	Ddx42	81	79.657	Cricetulus_griseus_crigri
ENSAMXG00000011435	ddx42	89	79.210	ENSCSEG00000021574	ddx42	97	75.242	Cynoglossus_semilaevis
ENSAMXG00000011435	ddx42	100	76.495	ENSCVAG00000011404	ddx42	88	79.657	Cyprinodon_variegatus
ENSAMXG00000011435	ddx42	100	80.842	ENSDARG00000037928	ddx42	92	84.670	Danio_rerio
ENSAMXG00000011435	ddx42	99	68.730	ENSDNOG00000007961	DDX42	78	80.110	Dasypus_novemcinctus
ENSAMXG00000011435	ddx42	99	63.505	ENSDORG00000004199	Ddx42	80	72.859	Dipodomys_ordii
ENSAMXG00000011435	ddx42	72	54.533	FBgn0036104	CG6418	85	56.414	Drosophila_melanogaster
ENSAMXG00000011435	ddx42	81	71.613	ENSEBUG00000001155	ddx42	88	72.418	Eptatretus_burgeri
ENSAMXG00000011435	ddx42	100	69.174	ENSEASG00005013089	DDX42	90	83.438	Equus_asinus_asinus
ENSAMXG00000011435	ddx42	99	68.916	ENSECAG00000022684	DDX42	80	80.871	Equus_caballus
ENSAMXG00000011435	ddx42	58	91.892	ENSEEUG00000009144	DDX42	73	96.970	Erinaceus_europaeus
ENSAMXG00000011435	ddx42	100	76.694	ENSELUG00000020593	ddx42	87	79.401	Esox_lucius
ENSAMXG00000011435	ddx42	99	69.317	ENSFCAG00000003499	DDX42	81	80.871	Felis_catus
ENSAMXG00000011435	ddx42	89	75.000	ENSFALG00000004675	DDX42	66	81.009	Ficedula_albicollis
ENSAMXG00000011435	ddx42	100	69.057	ENSFDAG00000020516	DDX42	81	81.003	Fukomys_damarensis
ENSAMXG00000011435	ddx42	100	74.922	ENSFHEG00000023290	ddx42	81	85.386	Fundulus_heteroclitus
ENSAMXG00000011435	ddx42	75	81.320	ENSGMOG00000004595	ddx42	77	81.250	Gadus_morhua
ENSAMXG00000011435	ddx42	100	69.121	ENSGALG00000000581	DDX42	77	81.070	Gallus_gallus
ENSAMXG00000011435	ddx42	100	71.924	ENSGACG00000009782	ddx42	94	74.341	Gasterosteus_aculeatus
ENSAMXG00000011435	ddx42	99	69.191	ENSGAGG00000024411	DDX42	76	80.933	Gopherus_agassizii
ENSAMXG00000011435	ddx42	99	70.316	ENSGGOG00000006779	DDX42	88	83.917	Gorilla_gorilla
ENSAMXG00000011435	ddx42	89	81.062	ENSHBUG00000008705	ddx42	97	74.946	Haplochromis_burtoni
ENSAMXG00000011435	ddx42	99	66.910	ENSHGLG00000010024	DDX42	80	75.931	Heterocephalus_glaber_female
ENSAMXG00000011435	ddx42	83	57.746	ENSHGLG00100007138	-	75	61.272	Heterocephalus_glaber_male
ENSAMXG00000011435	ddx42	99	69.969	ENSHGLG00100004479	-	81	79.156	Heterocephalus_glaber_male
ENSAMXG00000011435	ddx42	86	80.958	ENSHCOG00000003357	ddx42	88	82.786	Hippocampus_comes
ENSAMXG00000011435	ddx42	100	80.717	ENSIPUG00000013327	ddx42	93	85.495	Ictalurus_punctatus
ENSAMXG00000011435	ddx42	99	70.137	ENSSTOG00000008922	DDX42	78	81.063	Ictidomys_tridecemlineatus
ENSAMXG00000011435	ddx42	100	70.601	ENSJJAG00000011727	Ddx42	82	80.871	Jaculus_jaculus
ENSAMXG00000011435	ddx42	100	76.176	ENSKMAG00000009914	ddx42	87	80.653	Kryptolebias_marmoratus
ENSAMXG00000011435	ddx42	89	75.711	ENSLBEG00000004687	ddx42	82	82.182	Labrus_bergylta
ENSAMXG00000011435	ddx42	99	69.008	ENSLACG00000013476	DDX42	77	82.434	Latimeria_chalumnae
ENSAMXG00000011435	ddx42	100	77.801	ENSLOCG00000011764	ddx42	87	81.212	Lepisosteus_oculatus
ENSAMXG00000011435	ddx42	99	70.917	ENSMFAG00000031356	DDX42	82	83.917	Macaca_fascicularis
ENSAMXG00000011435	ddx42	99	70.052	ENSMMUG00000016762	DDX42	87	83.917	Macaca_mulatta
ENSAMXG00000011435	ddx42	99	70.917	ENSMNEG00000038250	DDX42	83	83.917	Macaca_nemestrina
ENSAMXG00000011435	ddx42	99	69.918	ENSMLEG00000043080	DDX42	82	80.915	Mandrillus_leucophaeus
ENSAMXG00000011435	ddx42	89	81.439	ENSMAMG00000021888	ddx42	84	82.460	Mastacembelus_armatus
ENSAMXG00000011435	ddx42	89	80.947	ENSMZEG00005023103	ddx42	97	74.839	Maylandia_zebra
ENSAMXG00000011435	ddx42	99	69.681	ENSMGAG00000001822	DDX42	77	81.070	Meleagris_gallopavo
ENSAMXG00000011435	ddx42	76	76.132	ENSMAUG00000020774	-	84	83.943	Mesocricetus_auratus
ENSAMXG00000011435	ddx42	100	70.514	ENSMICG00000009952	DDX42	81	80.978	Microcebus_murinus
ENSAMXG00000011435	ddx42	99	70.347	ENSMOCG00000015504	Ddx42	79	81.063	Microtus_ochrogaster
ENSAMXG00000011435	ddx42	89	75.615	ENSMMOG00000016963	ddx42	82	76.098	Mola_mola
ENSAMXG00000011435	ddx42	50	82.452	ENSMODG00000009917	-	93	82.628	Monodelphis_domestica
ENSAMXG00000011435	ddx42	100	76.963	ENSMALG00000007800	ddx42	88	81.531	Monopterus_albus
ENSAMXG00000011435	ddx42	99	69.938	MGP_CAROLIEiJ_G0017314	Ddx42	81	79.815	Mus_caroli
ENSAMXG00000011435	ddx42	99	69.835	ENSMUSG00000020705	Ddx42	81	79.815	Mus_musculus
ENSAMXG00000011435	ddx42	72	84.094	MGP_PahariEiJ_G0018444	-	91	84.284	Mus_pahari
ENSAMXG00000011435	ddx42	99	69.628	MGP_SPRETEiJ_G0018158	Ddx42	81	79.683	Mus_spretus
ENSAMXG00000011435	ddx42	99	69.286	ENSMPUG00000014921	DDX42	80	80.871	Mustela_putorius_furo
ENSAMXG00000011435	ddx42	99	70.934	ENSNGAG00000021897	Ddx42	79	81.063	Nannospalax_galili
ENSAMXG00000011435	ddx42	89	80.000	ENSNBRG00000004466	ddx42	97	75.081	Neolamprologus_brichardi
ENSAMXG00000011435	ddx42	100	69.413	ENSNLEG00000004248	DDX42	89	83.917	Nomascus_leucogenys
ENSAMXG00000011435	ddx42	62	71.993	ENSMEUG00000013227	-	71	71.821	Notamacropus_eugenii
ENSAMXG00000011435	ddx42	100	68.507	ENSOPRG00000014960	DDX42	80	81.275	Ochotona_princeps
ENSAMXG00000011435	ddx42	100	66.805	ENSODEG00000007810	DDX42	78	76.431	Octodon_degus
ENSAMXG00000011435	ddx42	89	80.716	ENSONIG00000000734	ddx42	97	75.054	Oreochromis_niloticus
ENSAMXG00000011435	ddx42	57	82.593	ENSOANG00000000265	DDX42	100	82.593	Ornithorhynchus_anatinus
ENSAMXG00000011435	ddx42	96	72.406	ENSOCUG00000004304	DDX42	74	79.947	Oryctolagus_cuniculus
ENSAMXG00000011435	ddx42	100	76.146	ENSORLG00000002395	ddx42	79	86.043	Oryzias_latipes
ENSAMXG00000011435	ddx42	100	76.667	ENSORLG00020011621	ddx42	81	86.314	Oryzias_latipes_hni
ENSAMXG00000011435	ddx42	100	76.562	ENSORLG00015004487	ddx42	81	86.179	Oryzias_latipes_hsok
ENSAMXG00000011435	ddx42	89	80.657	ENSOMEG00000020093	ddx42	81	87.263	Oryzias_melastigma
ENSAMXG00000011435	ddx42	100	70.742	ENSOGAG00000006872	DDX42	78	81.173	Otolemur_garnettii
ENSAMXG00000011435	ddx42	100	69.706	ENSOARG00000013540	DDX42	79	81.398	Ovis_aries
ENSAMXG00000011435	ddx42	99	70.316	ENSPPAG00000007496	DDX42	88	84.109	Pan_paniscus
ENSAMXG00000011435	ddx42	99	69.184	ENSPPRG00000002740	DDX42	81	80.871	Panthera_pardus
ENSAMXG00000011435	ddx42	100	69.113	ENSPTIG00000009932	DDX42	81	81.003	Panthera_tigris_altaica
ENSAMXG00000011435	ddx42	99	70.316	ENSPTRG00000009523	DDX42	88	84.109	Pan_troglodytes
ENSAMXG00000011435	ddx42	99	70.917	ENSPANG00000020990	DDX42	83	83.651	Papio_anubis
ENSAMXG00000011435	ddx42	100	76.030	ENSPKIG00000002901	ddx42	92	81.663	Paramormyrops_kingsleyae
ENSAMXG00000011435	ddx42	85	77.874	ENSPSIG00000010289	DDX42	88	81.344	Pelodiscus_sinensis
ENSAMXG00000011435	ddx42	89	76.019	ENSPMGG00000009323	ddx42	87	76.885	Periophthalmus_magnuspinnatus
ENSAMXG00000011435	ddx42	99	69.731	ENSPEMG00000006755	Ddx42	81	81.266	Peromyscus_maniculatus_bairdii
ENSAMXG00000011435	ddx42	79	70.909	ENSPMAG00000005580	ddx42	97	71.314	Petromyzon_marinus
ENSAMXG00000011435	ddx42	100	70.234	ENSPCIG00000009093	DDX42	89	74.736	Phascolarctos_cinereus
ENSAMXG00000011435	ddx42	100	75.437	ENSPFOG00000014104	ddx42	86	80.000	Poecilia_formosa
ENSAMXG00000011435	ddx42	100	75.437	ENSPLAG00000010522	ddx42	86	80.000	Poecilia_latipinna
ENSAMXG00000011435	ddx42	100	75.204	ENSPMEG00000010744	ddx42	85	80.025	Poecilia_mexicana
ENSAMXG00000011435	ddx42	92	64.491	ENSPCAG00000002474	DDX42	79	75.585	Procavia_capensis
ENSAMXG00000011435	ddx42	99	61.483	ENSPCOG00000001559	DDX42	87	76.606	Propithecus_coquereli
ENSAMXG00000011435	ddx42	74	78.940	ENSPNYG00000013954	ddx42	85	79.315	Pundamilia_nyererei
ENSAMXG00000011435	ddx42	97	89.394	ENSPNAG00000017352	ddx42	87	89.659	Pygocentrus_nattereri
ENSAMXG00000011435	ddx42	99	69.525	ENSRNOG00000009474	Ddx42	78	81.199	Rattus_norvegicus
ENSAMXG00000011435	ddx42	100	69.846	ENSRBIG00000004781	DDX42	90	83.994	Rhinopithecus_bieti
ENSAMXG00000011435	ddx42	99	70.382	ENSRROG00000029794	DDX42	77	83.994	Rhinopithecus_roxellana
ENSAMXG00000011435	ddx42	99	69.476	ENSSBOG00000029624	DDX42	88	83.917	Saimiri_boliviensis_boliviensis
ENSAMXG00000011435	ddx42	100	69.929	ENSSHAG00000012896	-	89	74.971	Sarcophilus_harrisii
ENSAMXG00000011435	ddx42	82	86.340	ENSSFOG00015014064	ddx42	79	87.517	Scleropages_formosus
ENSAMXG00000011435	ddx42	100	75.934	ENSSMAG00000009077	ddx42	88	81.333	Scophthalmus_maximus
ENSAMXG00000011435	ddx42	100	77.686	ENSSDUG00000022221	ddx42	88	81.709	Seriola_dumerili
ENSAMXG00000011435	ddx42	100	77.581	ENSSLDG00000018483	ddx42	88	81.387	Seriola_lalandi_dorsalis
ENSAMXG00000011435	ddx42	100	70.063	ENSSARG00000009847	DDX42	80	79.024	Sorex_araneus
ENSAMXG00000011435	ddx42	99	70.186	ENSSPUG00000018806	DDX42	78	81.756	Sphenodon_punctatus
ENSAMXG00000011435	ddx42	89	81.618	ENSSPAG00000013055	ddx42	87	82.017	Stegastes_partitus
ENSAMXG00000011435	ddx42	75	75.829	ENSSSCG00000017289	DDX42	74	83.729	Sus_scrofa
ENSAMXG00000011435	ddx42	99	69.731	ENSTGUG00000001931	DDX42	78	81.096	Taeniopygia_guttata
ENSAMXG00000011435	ddx42	100	73.542	ENSTRUG00000010711	ddx42	94	85.047	Takifugu_rubripes
ENSAMXG00000011435	ddx42	80	76.494	ENSTBEG00000010159	DDX42	95	76.269	Tupaia_belangeri
ENSAMXG00000011435	ddx42	100	69.184	ENSTTRG00000006962	DDX42	80	81.516	Tursiops_truncatus
ENSAMXG00000011435	ddx42	100	71.008	ENSUAMG00000007321	DDX42	80	79.551	Ursus_americanus
ENSAMXG00000011435	ddx42	100	70.557	ENSUMAG00000017438	DDX42	81	80.475	Ursus_maritimus
ENSAMXG00000011435	ddx42	94	69.935	ENSVPAG00000009633	DDX42	83	69.281	Vicugna_pacos
ENSAMXG00000011435	ddx42	99	69.419	ENSVVUG00000006095	DDX42	81	80.871	Vulpes_vulpes
ENSAMXG00000011435	ddx42	100	69.632	ENSXETG00000003245	ddx42	86	73.366	Xenopus_tropicalis
ENSAMXG00000011435	ddx42	85	75.960	ENSXCOG00000017560	ddx42	86	80.347	Xiphophorus_couchianus
ENSAMXG00000011435	ddx42	100	76.458	ENSXMAG00000008138	ddx42	88	80.025	Xiphophorus_maculatus