EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000011473 (Gene tree)
Gene ID: 103035803
Gene Symbol: cnot4b
Alias: zgc:63566
Full Name: CCR4-NOT transcription complex subunit 4-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 36445 bases
Position: chr7:1939113-1975557
Accession: 103035803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011785	RRM_1	PF00076.22	2.2e-05	1	1
ENSAMXP00000041259	RRM_1	PF00076.22	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011785	-	1989	-	ENSAMXP00000011785	662 (aa)	-	W5KW23
ENSAMXT00000039752	-	7519	XM_007259759	ENSAMXP00000041259	805 (aa)	XP_007259821	UPI000BBDF931

Gene Model

Click here to download ENSAMXG00000011473's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000011473	cnot4b	85	94.096	ENSAMXG00000001373	cnot4a	100	94.096

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011473	cnot4b	100	72.173	ENSG00000080802	CNOT4	99	93.962	Homo_sapiens
ENSAMXG00000011473	cnot4b	93	92.222	ENSAPOG00000016272	cnot4a	83	92.222	Acanthochromis_polyacanthus
ENSAMXG00000011473	cnot4b	92	90.090	ENSAMEG00000012081	CNOT4	92	90.090	Ailuropoda_melanoleuca
ENSAMXG00000011473	cnot4b	100	92.222	ENSACIG00000003011	cnot4a	87	92.222	Amphilophus_citrinellus
ENSAMXG00000011473	cnot4b	100	92.222	ENSAOCG00000010792	cnot4a	87	92.222	Amphiprion_ocellaris
ENSAMXG00000011473	cnot4b	100	92.222	ENSAPEG00000004680	cnot4a	87	92.222	Amphiprion_percula
ENSAMXG00000011473	cnot4b	100	91.852	ENSATEG00000017580	cnot4a	87	91.852	Anabas_testudineus
ENSAMXG00000011473	cnot4b	100	71.059	ENSAPLG00000016441	CNOT4	100	70.379	Anas_platyrhynchos
ENSAMXG00000011473	cnot4b	100	70.690	ENSACAG00000011154	CNOT4	100	69.221	Anolis_carolinensis
ENSAMXG00000011473	cnot4b	100	72.239	ENSANAG00000032156	CNOT4	100	92.620	Aotus_nancymaae
ENSAMXG00000011473	cnot4b	100	92.222	ENSACLG00000002514	cnot4a	100	92.251	Astatotilapia_calliptera
ENSAMXG00000011473	cnot4b	100	71.746	ENSBTAG00000017919	CNOT4	93	93.962	Bos_taurus
ENSAMXG00000011473	cnot4b	100	72.239	ENSCJAG00000012532	CNOT4	100	92.620	Callithrix_jacchus
ENSAMXG00000011473	cnot4b	100	71.704	ENSCAFG00000003223	CNOT4	100	92.620	Canis_familiaris
ENSAMXG00000011473	cnot4b	100	72.173	ENSCAFG00020000093	CNOT4	100	92.620	Canis_lupus_dingo
ENSAMXG00000011473	cnot4b	100	72.363	ENSCHIG00000010955	CNOT4	100	92.620	Capra_hircus
ENSAMXG00000011473	cnot4b	100	72.000	ENSTSYG00000000893	CNOT4	100	92.620	Carlito_syrichta
ENSAMXG00000011473	cnot4b	100	70.519	ENSCAPG00000006213	CNOT4	100	71.028	Cavia_aperea
ENSAMXG00000011473	cnot4b	100	72.000	ENSCPOG00000011526	CNOT4	100	72.895	Cavia_porcellus
ENSAMXG00000011473	cnot4b	100	71.768	ENSCCAG00000024414	CNOT4	99	93.962	Cebus_capucinus
ENSAMXG00000011473	cnot4b	100	71.704	ENSCATG00000022607	CNOT4	99	93.962	Cercocebus_atys
ENSAMXG00000011473	cnot4b	100	73.228	ENSCLAG00000001857	CNOT4	100	73.228	Chinchilla_lanigera
ENSAMXG00000011473	cnot4b	100	64.785	ENSCSAG00000009096	CNOT4	100	92.620	Chlorocebus_sabaeus
ENSAMXG00000011473	cnot4b	65	96.791	ENSCHOG00000010412	CNOT4	65	96.791	Choloepus_hoffmanni
ENSAMXG00000011473	cnot4b	100	70.798	ENSCPBG00000004959	CNOT4	100	70.093	Chrysemys_picta_bellii
ENSAMXG00000011473	cnot4b	53	71.008	ENSCING00000004364	-	55	71.008	Ciona_intestinalis
ENSAMXG00000011473	cnot4b	100	71.704	ENSCANG00000029319	CNOT4	99	93.962	Colobus_angolensis_palliatus
ENSAMXG00000011473	cnot4b	100	70.882	ENSCGRG00001014651	Cnot4	100	92.620	Cricetulus_griseus_chok1gshd
ENSAMXG00000011473	cnot4b	100	70.882	ENSCGRG00000005727	Cnot4	100	92.620	Cricetulus_griseus_crigri
ENSAMXG00000011473	cnot4b	94	92.222	ENSCSEG00000015080	cnot4a	94	81.024	Cynoglossus_semilaevis
ENSAMXG00000011473	cnot4b	100	91.481	ENSCVAG00000009399	cnot4a	100	91.209	Cyprinodon_variegatus
ENSAMXG00000011473	cnot4b	100	72.616	ENSDARG00000007045	cnot4a	100	72.993	Danio_rerio
ENSAMXG00000011473	cnot4b	100	94.624	ENSDARG00000007639	cnot4b	96	94.624	Danio_rerio
ENSAMXG00000011473	cnot4b	100	65.111	ENSDNOG00000009409	CNOT4	99	94.340	Dasypus_novemcinctus
ENSAMXG00000011473	cnot4b	100	73.333	ENSDORG00000012268	Cnot4	100	72.889	Dipodomys_ordii
ENSAMXG00000011473	cnot4b	100	63.502	ENSETEG00000013407	CNOT4	94	62.228	Echinops_telfairi
ENSAMXG00000011473	cnot4b	100	72.305	ENSEASG00005014430	CNOT4	100	72.363	Equus_asinus_asinus
ENSAMXG00000011473	cnot4b	100	72.305	ENSECAG00000020262	CNOT4	100	72.363	Equus_caballus
ENSAMXG00000011473	cnot4b	95	91.667	ENSELUG00000011540	cnot4b	96	87.279	Esox_lucius
ENSAMXG00000011473	cnot4b	99	90.909	ENSELUG00000008742	cnot4a	100	90.217	Esox_lucius
ENSAMXG00000011473	cnot4b	100	72.173	ENSFCAG00000011904	CNOT4	100	92.620	Felis_catus
ENSAMXG00000011473	cnot4b	100	71.059	ENSFALG00000011194	CNOT4	100	70.711	Ficedula_albicollis
ENSAMXG00000011473	cnot4b	100	72.605	ENSFDAG00000013525	CNOT4	100	92.620	Fukomys_damarensis
ENSAMXG00000011473	cnot4b	100	91.852	ENSFHEG00000006608	cnot4a	99	91.852	Fundulus_heteroclitus
ENSAMXG00000011473	cnot4b	96	69.554	ENSGMOG00000001329	cnot4a	100	69.297	Gadus_morhua
ENSAMXG00000011473	cnot4b	100	70.813	ENSGALG00000011682	CNOT4	100	70.502	Gallus_gallus
ENSAMXG00000011473	cnot4b	100	91.481	ENSGACG00000004276	cnot4a	100	91.513	Gasterosteus_aculeatus
ENSAMXG00000011473	cnot4b	100	70.920	ENSGAGG00000017331	CNOT4	100	70.093	Gopherus_agassizii
ENSAMXG00000011473	cnot4b	92	70.065	ENSGGOG00000000142	CNOT4	99	91.705	Gorilla_gorilla
ENSAMXG00000011473	cnot4b	100	92.222	ENSHBUG00000000027	cnot4a	100	92.251	Haplochromis_burtoni
ENSAMXG00000011473	cnot4b	100	72.000	ENSHGLG00000011533	CNOT4	100	92.620	Heterocephalus_glaber_female
ENSAMXG00000011473	cnot4b	84	73.555	ENSHGLG00100013058	CNOT4	93	93.962	Heterocephalus_glaber_male
ENSAMXG00000011473	cnot4b	99	91.111	ENSHCOG00000015815	cnot4a	100	91.144	Hippocampus_comes
ENSAMXG00000011473	cnot4b	100	86.093	ENSIPUG00000006393	cnot4	100	93.727	Ictalurus_punctatus
ENSAMXG00000011473	cnot4b	100	97.048	ENSIPUG00000016994	cnot4b	100	96.000	Ictalurus_punctatus
ENSAMXG00000011473	cnot4b	100	72.173	ENSSTOG00000007717	CNOT4	100	72.378	Ictidomys_tridecemlineatus
ENSAMXG00000011473	cnot4b	100	72.321	ENSJJAG00000016618	Cnot4	100	92.620	Jaculus_jaculus
ENSAMXG00000011473	cnot4b	84	65.116	ENSJJAG00000019991	-	94	89.299	Jaculus_jaculus
ENSAMXG00000011473	cnot4b	94	91.852	ENSKMAG00000004581	cnot4a	100	91.575	Kryptolebias_marmoratus
ENSAMXG00000011473	cnot4b	100	91.481	ENSLBEG00000009999	cnot4a	85	91.481	Labrus_bergylta
ENSAMXG00000011473	cnot4b	100	72.761	ENSLACG00000002647	CNOT4	99	72.093	Latimeria_chalumnae
ENSAMXG00000011473	cnot4b	100	93.548	ENSLOCG00000016126	cnot4a	100	77.150	Lepisosteus_oculatus
ENSAMXG00000011473	cnot4b	100	66.460	ENSLAFG00000000709	CNOT4	100	65.625	Loxodonta_africana
ENSAMXG00000011473	cnot4b	100	71.704	ENSMFAG00000046349	CNOT4	100	92.620	Macaca_fascicularis
ENSAMXG00000011473	cnot4b	100	71.704	ENSMMUG00000016181	CNOT4	99	93.962	Macaca_mulatta
ENSAMXG00000011473	cnot4b	100	72.173	ENSMNEG00000042164	CNOT4	99	93.962	Macaca_nemestrina
ENSAMXG00000011473	cnot4b	100	71.704	ENSMLEG00000032709	CNOT4	99	93.962	Mandrillus_leucophaeus
ENSAMXG00000011473	cnot4b	100	92.222	ENSMAMG00000023194	cnot4a	100	90.942	Mastacembelus_armatus
ENSAMXG00000011473	cnot4b	100	92.222	ENSMZEG00005007312	cnot4a	100	86.347	Maylandia_zebra
ENSAMXG00000011473	cnot4b	100	70.690	ENSMGAG00000011788	CNOT4	100	70.257	Meleagris_gallopavo
ENSAMXG00000011473	cnot4b	100	71.333	ENSMAUG00000020415	Cnot4	100	92.620	Mesocricetus_auratus
ENSAMXG00000011473	cnot4b	100	71.852	ENSMICG00000001667	CNOT4	99	93.962	Microcebus_murinus
ENSAMXG00000011473	cnot4b	100	71.322	ENSMOCG00000020955	Cnot4	100	92.620	Microtus_ochrogaster
ENSAMXG00000011473	cnot4b	81	91.513	ENSMMOG00000014565	cnot4a	98	91.513	Mola_mola
ENSAMXG00000011473	cnot4b	93	91.852	ENSMALG00000011662	cnot4a	80	91.852	Monopterus_albus
ENSAMXG00000011473	cnot4b	100	72.239	MGP_CAROLIEiJ_G0028217	Cnot4	100	92.620	Mus_caroli
ENSAMXG00000011473	cnot4b	100	71.196	ENSMUSG00000038784	Cnot4	100	92.620	Mus_musculus
ENSAMXG00000011473	cnot4b	100	71.049	MGP_PahariEiJ_G0021974	Cnot4	100	92.620	Mus_pahari
ENSAMXG00000011473	cnot4b	100	71.196	MGP_SPRETEiJ_G0029216	Cnot4	100	92.620	Mus_spretus
ENSAMXG00000011473	cnot4b	100	64.785	ENSMPUG00000004089	CNOT4	100	92.620	Mustela_putorius_furo
ENSAMXG00000011473	cnot4b	100	73.037	ENSMLUG00000008260	CNOT4	100	71.912	Myotis_lucifugus
ENSAMXG00000011473	cnot4b	100	72.444	ENSNGAG00000015030	Cnot4	100	92.620	Nannospalax_galili
ENSAMXG00000011473	cnot4b	100	72.929	ENSNBRG00000021144	cnot4a	100	85.978	Neolamprologus_brichardi
ENSAMXG00000011473	cnot4b	100	71.704	ENSNLEG00000013352	CNOT4	99	93.962	Nomascus_leucogenys
ENSAMXG00000011473	cnot4b	84	68.831	ENSOPRG00000001023	CNOT4	80	68.831	Ochotona_princeps
ENSAMXG00000011473	cnot4b	100	73.228	ENSODEG00000012975	CNOT4	100	73.228	Octodon_degus
ENSAMXG00000011473	cnot4b	100	92.222	ENSONIG00000008656	cnot4a	87	92.222	Oreochromis_niloticus
ENSAMXG00000011473	cnot4b	100	66.832	ENSOANG00000005006	CNOT4	100	64.159	Ornithorhynchus_anatinus
ENSAMXG00000011473	cnot4b	100	64.785	ENSOCUG00000013448	CNOT4	100	71.000	Oryctolagus_cuniculus
ENSAMXG00000011473	cnot4b	100	91.852	ENSORLG00000003727	cnot4a	88	91.852	Oryzias_latipes
ENSAMXG00000011473	cnot4b	100	92.222	ENSORLG00020015684	cnot4a	88	92.222	Oryzias_latipes_hni
ENSAMXG00000011473	cnot4b	100	92.222	ENSORLG00015008470	cnot4a	88	92.222	Oryzias_latipes_hsok
ENSAMXG00000011473	cnot4b	100	91.852	ENSOMEG00000011084	cnot4a	88	91.852	Oryzias_melastigma
ENSAMXG00000011473	cnot4b	100	64.663	ENSOGAG00000015499	CNOT4	99	93.962	Otolemur_garnettii
ENSAMXG00000011473	cnot4b	100	64.634	ENSOARG00000008803	CNOT4	100	70.481	Ovis_aries
ENSAMXG00000011473	cnot4b	100	71.852	ENSPPAG00000041937	CNOT4	95	93.962	Pan_paniscus
ENSAMXG00000011473	cnot4b	100	71.704	ENSPPRG00000023940	CNOT4	93	93.962	Panthera_pardus
ENSAMXG00000011473	cnot4b	100	72.024	ENSPTIG00000016601	CNOT4	100	92.620	Panthera_tigris_altaica
ENSAMXG00000011473	cnot4b	100	71.704	ENSPTRG00000019727	CNOT4	99	93.962	Pan_troglodytes
ENSAMXG00000011473	cnot4b	100	71.704	ENSPANG00000017724	CNOT4	99	93.962	Papio_anubis
ENSAMXG00000011473	cnot4b	100	88.070	ENSPKIG00000018137	cnot4a	100	91.513	Paramormyrops_kingsleyae
ENSAMXG00000011473	cnot4b	100	71.095	ENSPSIG00000011256	CNOT4	100	69.951	Pelodiscus_sinensis
ENSAMXG00000011473	cnot4b	85	91.144	ENSPMGG00000005671	cnot4a	100	91.144	Periophthalmus_magnuspinnatus
ENSAMXG00000011473	cnot4b	100	70.882	ENSPEMG00000021566	Cnot4	100	73.368	Peromyscus_maniculatus_bairdii
ENSAMXG00000011473	cnot4b	100	73.810	ENSPCIG00000029622	CNOT4	96	71.859	Phascolarctos_cinereus
ENSAMXG00000011473	cnot4b	100	91.852	ENSPFOG00000002228	cnot4a	85	91.852	Poecilia_formosa
ENSAMXG00000011473	cnot4b	100	91.852	ENSPLAG00000001780	cnot4a	100	91.575	Poecilia_latipinna
ENSAMXG00000011473	cnot4b	100	91.852	ENSPMEG00000006852	cnot4a	100	91.575	Poecilia_mexicana
ENSAMXG00000011473	cnot4b	100	91.852	ENSPREG00000008171	cnot4a	100	87.857	Poecilia_reticulata
ENSAMXG00000011473	cnot4b	100	64.785	ENSPPYG00000018026	CNOT4	100	92.620	Pongo_abelii
ENSAMXG00000011473	cnot4b	100	71.704	ENSPCOG00000019907	CNOT4	98	93.962	Propithecus_coquereli
ENSAMXG00000011473	cnot4b	94	64.935	ENSPVAG00000004905	CNOT4	90	62.718	Pteropus_vampyrus
ENSAMXG00000011473	cnot4b	100	92.222	ENSPNYG00000004276	cnot4a	100	86.347	Pundamilia_nyererei
ENSAMXG00000011473	cnot4b	92	93.727	ENSPNAG00000020433	cnot4a	100	93.727	Pygocentrus_nattereri
ENSAMXG00000011473	cnot4b	100	98.893	ENSPNAG00000008679	cnot4b	100	98.893	Pygocentrus_nattereri
ENSAMXG00000011473	cnot4b	100	64.626	ENSRNOG00000010795	Cnot4	100	92.620	Rattus_norvegicus
ENSAMXG00000011473	cnot4b	100	71.704	ENSRBIG00000043977	CNOT4	99	93.962	Rhinopithecus_bieti
ENSAMXG00000011473	cnot4b	100	73.228	ENSSBOG00000020808	CNOT4	99	83.796	Saimiri_boliviensis_boliviensis
ENSAMXG00000011473	cnot4b	83	93.846	ENSSFOG00015002019	cnot4a	93	89.123	Scleropages_formosus
ENSAMXG00000011473	cnot4b	100	93.548	ENSSFOG00015017285	CNOT4	86	93.548	Scleropages_formosus
ENSAMXG00000011473	cnot4b	100	92.222	ENSSMAG00000008614	cnot4a	100	90.942	Scophthalmus_maximus
ENSAMXG00000011473	cnot4b	100	92.222	ENSSDUG00000022635	cnot4a	87	92.222	Seriola_dumerili
ENSAMXG00000011473	cnot4b	100	73.002	ENSSDUG00000018585	cnot4b	99	94.403	Seriola_dumerili
ENSAMXG00000011473	cnot4b	100	66.135	ENSSLDG00000014347	cnot4b	100	66.585	Seriola_lalandi_dorsalis
ENSAMXG00000011473	cnot4b	100	92.222	ENSSLDG00000015770	cnot4a	100	90.942	Seriola_lalandi_dorsalis
ENSAMXG00000011473	cnot4b	100	73.551	ENSSPUG00000004677	CNOT4	100	72.353	Sphenodon_punctatus
ENSAMXG00000011473	cnot4b	100	92.222	ENSSPAG00000012329	cnot4a	100	92.251	Stegastes_partitus
ENSAMXG00000011473	cnot4b	100	71.704	ENSSSCG00000021354	CNOT4	99	93.962	Sus_scrofa
ENSAMXG00000011473	cnot4b	100	71.182	ENSTGUG00000009161	CNOT4	100	70.624	Taeniopygia_guttata
ENSAMXG00000011473	cnot4b	100	91.852	ENSTRUG00000016861	cnot4a	100	91.882	Takifugu_rubripes
ENSAMXG00000011473	cnot4b	92	85.556	ENSTNIG00000016000	cnot4a	99	85.556	Tetraodon_nigroviridis
ENSAMXG00000011473	cnot4b	88	67.993	ENSTBEG00000002202	CNOT4	88	61.464	Tupaia_belangeri
ENSAMXG00000011473	cnot4b	93	74.194	ENSTTRG00000005122	CNOT4	90	71.405	Tursiops_truncatus
ENSAMXG00000011473	cnot4b	100	71.704	ENSUAMG00000026759	CNOT4	93	93.962	Ursus_americanus
ENSAMXG00000011473	cnot4b	99	71.791	ENSUMAG00000015351	CNOT4	93	93.962	Ursus_maritimus
ENSAMXG00000011473	cnot4b	100	72.173	ENSVVUG00000006200	CNOT4	100	92.620	Vulpes_vulpes
ENSAMXG00000011473	cnot4b	99	93.333	ENSXETG00000010594	cnot4	89	93.333	Xenopus_tropicalis
ENSAMXG00000011473	cnot4b	79	92.308	ENSXCOG00000020824	cnot4a	98	66.898	Xiphophorus_couchianus
ENSAMXG00000011473	cnot4b	100	92.222	ENSXMAG00000016984	cnot4a	100	91.941	Xiphophorus_maculatus