EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000011495 (Gene tree)
Gene ID: 103033190
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7737 bases
Position: chr23:15659055-15666791
Accession: 103033190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033478	RRM_1	PF00076.22	2.1e-10	1	1
ENSAMXP00000011815	RRM_1	PF00076.22	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011815	-	1035	-	ENSAMXP00000011815	344 (aa)	-	W5KW53
ENSAMXT00000047576	-	2998	XM_022683105	ENSAMXP00000033478	367 (aa)	XP_022538826	UPI000BBDA1C5

Gene Model

Click here to download ENSAMXG00000011495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011495	nelfe	99	67.751	ENSG00000204356	NELFE	97	74.839	Homo_sapiens
ENSAMXG00000011495	nelfe	99	80.274	ENSACLG00000006848	nelfe	99	79.837	Astatotilapia_calliptera
ENSAMXG00000011495	nelfe	85	60.577	ENSCPBG00000000225	NELFE	51	70.946	Chrysemys_picta_bellii
ENSAMXG00000011495	nelfe	100	79.891	ENSDARG00000004343	nelfe	72	88.235	Danio_rerio
ENSAMXG00000011495	nelfe	84	59.412	ENSEBUG00000017070	nelfe	88	66.429	Eptatretus_burgeri
ENSAMXG00000011495	nelfe	82	81.013	ENSEEUG00000005004	NELFE	62	79.012	Erinaceus_europaeus
ENSAMXG00000011495	nelfe	99	57.650	ENSGALG00000045676	NELFE	88	73.387	Gallus_gallus
ENSAMXG00000011495	nelfe	99	78.356	ENSHBUG00000023659	nelfe	99	78.082	Haplochromis_burtoni
ENSAMXG00000011495	nelfe	99	67.209	ENSLAFG00000028155	NELFE	84	76.552	Loxodonta_africana
ENSAMXG00000011495	nelfe	90	54.045	ENSMMUG00000041521	-	76	81.250	Macaca_mulatta
ENSAMXG00000011495	nelfe	99	80.274	ENSMZEG00005026412	nelfe	99	79.837	Maylandia_zebra
ENSAMXG00000011495	nelfe	91	52.976	ENSMGAG00000001297	NELFE	69	74.510	Meleagris_gallopavo
ENSAMXG00000011495	nelfe	74	75.862	ENSMODG00000015063	NELFE	84	75.862	Monodelphis_domestica
ENSAMXG00000011495	nelfe	76	88.618	ENSONIG00000013513	nelfe	81	88.618	Oreochromis_niloticus
ENSAMXG00000011495	nelfe	100	78.320	ENSPKIG00000012048	nelfe	77	87.500	Paramormyrops_kingsleyae
ENSAMXG00000011495	nelfe	99	77.534	ENSPNYG00000017837	nelfe	99	77.808	Pundamilia_nyererei
ENSAMXG00000011495	nelfe	99	57.027	ENSXETG00000010931	nelfe	69	76.087	Xenopus_tropicalis