EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000011538 (Gene tree)
Gene ID: 103038471
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor%2C proline- and glutamine-rich-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8760 bases
Position: chr23:21329336-21338095
Accession: 103038471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011854	RRM_1	PF00076.22	1.5e-28	1	2
ENSAMXP00000011854	RRM_1	PF00076.22	1.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011854	-	2804	XM_007249376	ENSAMXP00000011854	656 (aa)	XP_007249438	W5KW92

Gene Model

Click here to download ENSAMXG00000011538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000011538	sfpq	63	59.268	ENSAMXG00000036881	pspc1	75	60.652
ENSAMXG00000011538	sfpq	62	61.275	ENSAMXG00000033933	nono	90	57.547

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011538	sfpq	65	72.273	ENSG00000116560	SFPQ	83	78.495	Homo_sapiens
ENSAMXG00000011538	sfpq	64	83.532	ENSAPOG00000024257	sfpq	64	80.272	Acanthochromis_polyacanthus
ENSAMXG00000011538	sfpq	65	72.273	ENSAMEG00000000815	SFPQ	99	70.455	Ailuropoda_melanoleuca
ENSAMXG00000011538	sfpq	79	70.802	ENSACIG00000000905	sfpq	76	75.105	Amphilophus_citrinellus
ENSAMXG00000011538	sfpq	64	83.055	ENSAOCG00000002889	sfpq	61	81.352	Amphiprion_ocellaris
ENSAMXG00000011538	sfpq	64	83.055	ENSAPEG00000016556	sfpq	61	81.352	Amphiprion_percula
ENSAMXG00000011538	sfpq	81	71.940	ENSATEG00000002981	sfpq	73	76.409	Anabas_testudineus
ENSAMXG00000011538	sfpq	52	51.268	ENSANAG00000021268	-	100	49.003	Aotus_nancymaae
ENSAMXG00000011538	sfpq	52	54.286	ENSANAG00000037798	-	75	58.029	Aotus_nancymaae
ENSAMXG00000011538	sfpq	61	64.303	ENSANAG00000027438	-	73	54.949	Aotus_nancymaae
ENSAMXG00000011538	sfpq	99	60.644	ENSACLG00000022332	sfpq	63	81.030	Astatotilapia_calliptera
ENSAMXG00000011538	sfpq	65	72.273	ENSBTAG00000016328	SFPQ	62	69.841	Bos_taurus
ENSAMXG00000011538	sfpq	65	72.273	ENSCJAG00000001431	SFPQ	62	69.841	Callithrix_jacchus
ENSAMXG00000011538	sfpq	65	67.045	ENSCAFG00000017608	-	68	64.859	Canis_familiaris
ENSAMXG00000011538	sfpq	66	69.663	ENSCAFG00000018271	-	67	67.416	Canis_familiaris
ENSAMXG00000011538	sfpq	65	72.273	ENSCAFG00000003595	-	72	66.876	Canis_familiaris
ENSAMXG00000011538	sfpq	66	69.663	ENSCAFG00020004881	-	67	67.416	Canis_lupus_dingo
ENSAMXG00000011538	sfpq	52	65.812	ENSCAFG00020010702	-	100	64.103	Canis_lupus_dingo
ENSAMXG00000011538	sfpq	65	72.273	ENSCHIG00000023097	SFPQ	62	69.841	Capra_hircus
ENSAMXG00000011538	sfpq	52	71.307	ENSTSYG00000037120	-	100	69.034	Carlito_syrichta
ENSAMXG00000011538	sfpq	51	60.057	ENSTSYG00000035106	-	98	58.333	Carlito_syrichta
ENSAMXG00000011538	sfpq	52	63.248	ENSCPOG00000015018	-	100	60.274	Cavia_porcellus
ENSAMXG00000011538	sfpq	66	71.493	ENSCCAG00000029361	-	62	69.841	Cebus_capucinus
ENSAMXG00000011538	sfpq	66	47.884	ENSCATG00000032664	-	61	43.355	Cercocebus_atys
ENSAMXG00000011538	sfpq	55	75.824	ENSCATG00000036179	-	55	71.883	Cercocebus_atys
ENSAMXG00000011538	sfpq	52	71.307	ENSCLAG00000009583	-	100	69.034	Chinchilla_lanigera
ENSAMXG00000011538	sfpq	65	72.273	ENSCSAG00000001082	SFPQ	62	69.841	Chlorocebus_sabaeus
ENSAMXG00000011538	sfpq	56	71.654	ENSCHOG00000009131	SFPQ	100	69.554	Choloepus_hoffmanni
ENSAMXG00000011538	sfpq	65	71.493	ENSCPBG00000018674	SFPQ	68	69.457	Chrysemys_picta_bellii
ENSAMXG00000011538	sfpq	52	71.307	ENSCANG00000028087	-	100	69.034	Colobus_angolensis_palliatus
ENSAMXG00000011538	sfpq	66	71.910	ENSCGRG00001011698	Sfpq	68	67.086	Cricetulus_griseus_chok1gshd
ENSAMXG00000011538	sfpq	64	73.488	ENSCGRG00000010128	Sfpq	95	71.462	Cricetulus_griseus_crigri
ENSAMXG00000011538	sfpq	99	62.482	ENSCSEG00000007852	sfpq	71	74.160	Cynoglossus_semilaevis
ENSAMXG00000011538	sfpq	97	53.258	ENSCVAG00000019538	sfpq	73	66.460	Cyprinodon_variegatus
ENSAMXG00000011538	sfpq	100	64.521	ENSDARG00000011564	sfpq	100	91.304	Danio_rerio
ENSAMXG00000011538	sfpq	65	72.273	ENSDNOG00000049454	SFPQ	62	69.841	Dasypus_novemcinctus
ENSAMXG00000011538	sfpq	65	72.273	ENSDORG00000008109	Sfpq	63	69.841	Dipodomys_ordii
ENSAMXG00000011538	sfpq	64	67.053	ENSETEG00000001095	SFPQ	61	61.758	Echinops_telfairi
ENSAMXG00000011538	sfpq	65	72.273	ENSEASG00005012012	SFPQ	62	69.841	Equus_asinus_asinus
ENSAMXG00000011538	sfpq	65	72.273	ENSECAG00000000642	SFPQ	62	69.841	Equus_caballus
ENSAMXG00000011538	sfpq	71	76.715	ENSELUG00000023145	sfpq	78	75.654	Esox_lucius
ENSAMXG00000011538	sfpq	65	72.273	ENSFCAG00000042862	SFPQ	63	69.841	Felis_catus
ENSAMXG00000011538	sfpq	52	70.455	ENSFALG00000000731	SFPQ	100	68.182	Ficedula_albicollis
ENSAMXG00000011538	sfpq	52	62.606	ENSFDAG00000017723	-	100	62.890	Fukomys_damarensis
ENSAMXG00000011538	sfpq	78	65.326	ENSFHEG00000015200	sfpq	66	66.733	Fundulus_heteroclitus
ENSAMXG00000011538	sfpq	75	72.837	ENSGMOG00000011950	SFPQ	80	76.559	Gadus_morhua
ENSAMXG00000011538	sfpq	94	61.196	ENSGMOG00000011957	sfpq	67	79.215	Gadus_morhua
ENSAMXG00000011538	sfpq	64	71.926	ENSGALG00000002514	SFPQ	67	69.655	Gallus_gallus
ENSAMXG00000011538	sfpq	94	58.088	ENSGAFG00000014571	sfpq	69	69.668	Gambusia_affinis
ENSAMXG00000011538	sfpq	94	63.968	ENSGACG00000002034	sfpq	81	72.311	Gasterosteus_aculeatus
ENSAMXG00000011538	sfpq	52	71.307	ENSGGOG00000026354	SFPQ	100	69.034	Gorilla_gorilla
ENSAMXG00000011538	sfpq	99	62.229	ENSHBUG00000016818	sfpq	63	81.030	Haplochromis_burtoni
ENSAMXG00000011538	sfpq	65	71.783	ENSHGLG00000012001	SFPQ	64	69.369	Heterocephalus_glaber_female
ENSAMXG00000011538	sfpq	52	71.307	ENSHGLG00100004136	-	100	69.034	Heterocephalus_glaber_male
ENSAMXG00000011538	sfpq	64	80.952	ENSHCOG00000008612	sfpq	80	69.979	Hippocampus_comes
ENSAMXG00000011538	sfpq	94	70.665	ENSIPUG00000013076	SFPQ	81	84.486	Ictalurus_punctatus
ENSAMXG00000011538	sfpq	52	71.307	ENSSTOG00000014004	-	100	69.034	Ictidomys_tridecemlineatus
ENSAMXG00000011538	sfpq	65	72.273	ENSJJAG00000015633	Sfpq	62	69.841	Jaculus_jaculus
ENSAMXG00000011538	sfpq	79	69.143	ENSKMAG00000000238	sfpq	53	78.520	Kryptolebias_marmoratus
ENSAMXG00000011538	sfpq	64	78.860	ENSLBEG00000003163	sfpq	57	80.292	Labrus_bergylta
ENSAMXG00000011538	sfpq	78	63.894	ENSLACG00000014728	SFPQ	70	74.074	Latimeria_chalumnae
ENSAMXG00000011538	sfpq	65	80.549	ENSLOCG00000001067	sfpq	76	77.136	Lepisosteus_oculatus
ENSAMXG00000011538	sfpq	65	72.273	ENSLAFG00000015951	SFPQ	72	68.502	Loxodonta_africana
ENSAMXG00000011538	sfpq	65	72.273	ENSMFAG00000000797	SFPQ	62	69.841	Macaca_fascicularis
ENSAMXG00000011538	sfpq	65	72.273	ENSMMUG00000019154	SFPQ	62	69.841	Macaca_mulatta
ENSAMXG00000011538	sfpq	65	72.273	ENSMNEG00000038895	SFPQ	62	69.841	Macaca_nemestrina
ENSAMXG00000011538	sfpq	52	68.750	ENSMLEG00000010643	-	100	66.477	Mandrillus_leucophaeus
ENSAMXG00000011538	sfpq	94	63.240	ENSMAMG00000007875	sfpq	67	82.160	Mastacembelus_armatus
ENSAMXG00000011538	sfpq	99	60.669	ENSMZEG00005026091	sfpq	63	81.030	Maylandia_zebra
ENSAMXG00000011538	sfpq	56	69.643	ENSMGAG00000004237	SFPQ	100	66.327	Meleagris_gallopavo
ENSAMXG00000011538	sfpq	66	71.910	ENSMAUG00000006402	Sfpq	68	67.086	Mesocricetus_auratus
ENSAMXG00000011538	sfpq	65	72.273	ENSMICG00000027265	SFPQ	62	69.841	Microcebus_murinus
ENSAMXG00000011538	sfpq	66	69.438	ENSMOCG00000019075	Sfpq	99	64.780	Microtus_ochrogaster
ENSAMXG00000011538	sfpq	99	62.445	ENSMMOG00000001074	sfpq	77	72.561	Mola_mola
ENSAMXG00000011538	sfpq	65	71.982	ENSMODG00000017937	SFPQ	73	64.898	Monodelphis_domestica
ENSAMXG00000011538	sfpq	67	78.636	ENSMALG00000010381	sfpq	74	73.624	Monopterus_albus
ENSAMXG00000011538	sfpq	65	72.500	MGP_CAROLIEiJ_G0026487	Sfpq	63	69.977	Mus_caroli
ENSAMXG00000011538	sfpq	65	72.500	ENSMUSG00000028820	Sfpq	63	69.977	Mus_musculus
ENSAMXG00000011538	sfpq	65	72.500	MGP_PahariEiJ_G0028818	Sfpq	63	69.977	Mus_pahari
ENSAMXG00000011538	sfpq	65	72.500	MGP_SPRETEiJ_G0027466	Sfpq	63	69.977	Mus_spretus
ENSAMXG00000011538	sfpq	64	72.854	ENSMLUG00000027090	SFPQ	97	70.413	Myotis_lucifugus
ENSAMXG00000011538	sfpq	65	72.500	ENSNGAG00000000888	Sfpq	62	70.682	Nannospalax_galili
ENSAMXG00000011538	sfpq	94	63.706	ENSNBRG00000017479	sfpq	63	81.499	Neolamprologus_brichardi
ENSAMXG00000011538	sfpq	52	71.307	ENSNLEG00000035521	-	100	69.034	Nomascus_leucogenys
ENSAMXG00000011538	sfpq	65	72.374	ENSMEUG00000014082	SFPQ	63	69.545	Notamacropus_eugenii
ENSAMXG00000011538	sfpq	66	71.847	ENSOPRG00000013696	SFPQ	63	70.045	Ochotona_princeps
ENSAMXG00000011538	sfpq	63	63.466	ENSODEG00000005485	SFPQ	68	65.952	Octodon_degus
ENSAMXG00000011538	sfpq	85	65.313	ENSONIG00000017737	sfpq	63	80.562	Oreochromis_niloticus
ENSAMXG00000011538	sfpq	52	71.795	ENSOANG00000008789	-	100	69.231	Ornithorhynchus_anatinus
ENSAMXG00000011538	sfpq	65	72.273	ENSOCUG00000001877	SFPQ	86	70.455	Oryctolagus_cuniculus
ENSAMXG00000011538	sfpq	89	62.932	ENSORLG00000007459	sfpq	70	69.727	Oryzias_latipes
ENSAMXG00000011538	sfpq	99	57.703	ENSORLG00020011818	sfpq	62	74.286	Oryzias_latipes_hni
ENSAMXG00000011538	sfpq	99	56.208	ENSORLG00015002131	sfpq	64	74.249	Oryzias_latipes_hsok
ENSAMXG00000011538	sfpq	99	57.218	ENSOMEG00000018020	sfpq	65	71.959	Oryzias_melastigma
ENSAMXG00000011538	sfpq	65	72.500	ENSOGAG00000027710	SFPQ	90	67.086	Otolemur_garnettii
ENSAMXG00000011538	sfpq	64	73.086	ENSOARG00000019439	SFPQ	66	71.230	Ovis_aries
ENSAMXG00000011538	sfpq	65	72.273	ENSPPAG00000030078	SFPQ	62	69.841	Pan_paniscus
ENSAMXG00000011538	sfpq	52	71.105	ENSPPRG00000015478	-	100	68.555	Panthera_pardus
ENSAMXG00000011538	sfpq	52	71.307	ENSPTIG00000007710	-	100	69.034	Panthera_tigris_altaica
ENSAMXG00000011538	sfpq	65	66.364	ENSPTRG00000000518	SFPQ	61	63.946	Pan_troglodytes
ENSAMXG00000011538	sfpq	65	72.273	ENSPANG00000005380	SFPQ	71	66.876	Papio_anubis
ENSAMXG00000011538	sfpq	64	73.318	ENSPSIG00000011494	SFPQ	99	70.302	Pelodiscus_sinensis
ENSAMXG00000011538	sfpq	66	72.748	ENSPMGG00000023883	sfpq	81	68.672	Periophthalmus_magnuspinnatus
ENSAMXG00000011538	sfpq	66	71.910	ENSPEMG00000009794	Sfpq	94	67.965	Peromyscus_maniculatus_bairdii
ENSAMXG00000011538	sfpq	66	71.847	ENSPCIG00000000923	SFPQ	70	65.306	Phascolarctos_cinereus
ENSAMXG00000011538	sfpq	85	64.851	ENSPREG00000008060	sfpq	63	71.239	Poecilia_reticulata
ENSAMXG00000011538	sfpq	65	72.273	ENSPPYG00000001560	SFPQ	62	69.841	Pongo_abelii
ENSAMXG00000011538	sfpq	63	72.791	ENSPCAG00000006164	SFPQ	60	70.698	Procavia_capensis
ENSAMXG00000011538	sfpq	65	72.273	ENSPCOG00000027127	SFPQ	62	69.841	Propithecus_coquereli
ENSAMXG00000011538	sfpq	65	70.159	ENSPVAG00000001865	SFPQ	63	68.337	Pteropus_vampyrus
ENSAMXG00000011538	sfpq	65	81.030	ENSPNYG00000007494	sfpq	62	80.796	Pundamilia_nyererei
ENSAMXG00000011538	sfpq	94	75.917	ENSPNAG00000002128	sfpq	79	86.957	Pygocentrus_nattereri
ENSAMXG00000011538	sfpq	65	72.500	ENSRNOG00000058461	Sfpq	64	69.977	Rattus_norvegicus
ENSAMXG00000011538	sfpq	65	65.760	ENSRBIG00000035286	SFPQ	100	69.034	Rhinopithecus_bieti
ENSAMXG00000011538	sfpq	52	71.307	ENSRROG00000040992	SFPQ	100	69.034	Rhinopithecus_roxellana
ENSAMXG00000011538	sfpq	52	71.307	ENSSBOG00000024972	-	100	69.034	Saimiri_boliviensis_boliviensis
ENSAMXG00000011538	sfpq	50	53.216	ENSSBOG00000033925	-	87	53.947	Saimiri_boliviensis_boliviensis
ENSAMXG00000011538	sfpq	64	70.089	ENSSHAG00000016107	-	96	66.964	Sarcophilus_harrisii
ENSAMXG00000011538	sfpq	52	70.571	ENSSHAG00000012312	-	100	67.429	Sarcophilus_harrisii
ENSAMXG00000011538	sfpq	75	75.048	ENSSFOG00015009289	sfpq	89	77.755	Scleropages_formosus
ENSAMXG00000011538	sfpq	64	80.907	ENSSMAG00000018201	sfpq	80	69.650	Scophthalmus_maximus
ENSAMXG00000011538	sfpq	68	79.955	ENSSDUG00000008402	sfpq	69	79.510	Seriola_dumerili
ENSAMXG00000011538	sfpq	94	64.780	ENSSLDG00000018917	sfpq	69	79.510	Seriola_lalandi_dorsalis
ENSAMXG00000011538	sfpq	54	72.087	ENSSARG00000006409	SFPQ	100	69.919	Sorex_araneus
ENSAMXG00000011538	sfpq	64	83.294	ENSSPAG00000016550	sfpq	64	81.585	Stegastes_partitus
ENSAMXG00000011538	sfpq	65	72.273	ENSSSCG00000035690	SFPQ	69	66.529	Sus_scrofa
ENSAMXG00000011538	sfpq	64	71.926	ENSTGUG00000001722	SFPQ	99	70.070	Taeniopygia_guttata
ENSAMXG00000011538	sfpq	99	62.391	ENSTRUG00000003783	sfpq	64	80.046	Takifugu_rubripes
ENSAMXG00000011538	sfpq	84	68.582	ENSTNIG00000011331	sfpq	81	75.000	Tetraodon_nigroviridis
ENSAMXG00000011538	sfpq	65	70.227	ENSTTRG00000013930	SFPQ	63	67.800	Tursiops_truncatus
ENSAMXG00000011538	sfpq	52	69.034	ENSUMAG00000008056	-	100	66.761	Ursus_maritimus
ENSAMXG00000011538	sfpq	52	66.379	ENSVVUG00000000874	-	100	64.080	Vulpes_vulpes
ENSAMXG00000011538	sfpq	65	68.304	ENSXETG00000009682	sfpq	94	79.942	Xenopus_tropicalis
ENSAMXG00000011538	sfpq	78	65.524	ENSXMAG00000016391	sfpq	59	74.811	Xiphophorus_maculatus