EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000011547 (Gene tree)
Gene ID: 103033338
Gene Symbol: prpf19
Alias: fb18f09|prp19|wu:fb18f09|zgc:56158
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10306 bases
Position: chr24:12487582-12497887
Accession: 103033338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052404	Prp19	PF08606.11	1.7e-33	1	1
ENSAMXP00000011866	Prp19	PF08606.11	2.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030689	-	3664	XM_022683601	ENSAMXP00000052404	505 (aa)	XP_022539322	UPI000BBDE602
ENSAMXT00000011866	-	1428	-	ENSAMXP00000011866	475 (aa)	-	W5KWA4

Gene Model

Click here to download ENSAMXG00000011547's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG
amex04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000011547	prpf19	50	30.769	ENSAMXG00000042589	tbl3	50	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011547	prpf19	100	85.743	ENSG00000110107	PRPF19	100	89.524	Homo_sapiens
ENSAMXG00000011547	prpf19	100	94.851	ENSAPOG00000017823	prpf19	100	94.851	Acanthochromis_polyacanthus
ENSAMXG00000011547	prpf19	100	85.341	ENSAMEG00000007375	PRPF19	99	85.341	Ailuropoda_melanoleuca
ENSAMXG00000011547	prpf19	99	93.254	ENSACIG00000015876	prpf19	99	93.254	Amphilophus_citrinellus
ENSAMXG00000011547	prpf19	100	94.851	ENSAOCG00000020444	prpf19	100	94.851	Amphiprion_ocellaris
ENSAMXG00000011547	prpf19	100	94.851	ENSAPEG00000016076	prpf19	100	94.851	Amphiprion_percula
ENSAMXG00000011547	prpf19	100	95.050	ENSATEG00000008840	prpf19	100	95.050	Anabas_testudineus
ENSAMXG00000011547	prpf19	100	86.139	ENSACAG00000017797	PRPF19	100	86.139	Anolis_carolinensis
ENSAMXG00000011547	prpf19	100	85.545	ENSANAG00000021762	PRPF19	100	85.545	Aotus_nancymaae
ENSAMXG00000011547	prpf19	100	94.653	ENSACLG00000009416	prpf19	100	94.653	Astatotilapia_calliptera
ENSAMXG00000011547	prpf19	100	85.743	ENSBTAG00000014366	PRPF19	100	85.743	Bos_taurus
ENSAMXG00000011547	prpf19	100	51.874	WBGene00020423	prp-19	100	52.071	Caenorhabditis_elegans
ENSAMXG00000011547	prpf19	100	85.545	ENSCJAG00000016509	PRPF19	100	85.545	Callithrix_jacchus
ENSAMXG00000011547	prpf19	100	85.545	ENSCAFG00000016438	PRPF19	98	85.545	Canis_familiaris
ENSAMXG00000011547	prpf19	100	85.545	ENSCAFG00020012565	PRPF19	100	85.545	Canis_lupus_dingo
ENSAMXG00000011547	prpf19	100	85.743	ENSCHIG00000018281	PRPF19	100	85.743	Capra_hircus
ENSAMXG00000011547	prpf19	99	85.600	ENSTSYG00000006860	PRPF19	99	85.600	Carlito_syrichta
ENSAMXG00000011547	prpf19	99	86.000	ENSCAPG00000016225	PRPF19	100	86.000	Cavia_aperea
ENSAMXG00000011547	prpf19	100	85.941	ENSCPOG00000020688	PRPF19	100	85.941	Cavia_porcellus
ENSAMXG00000011547	prpf19	100	85.545	ENSCCAG00000025839	PRPF19	100	85.545	Cebus_capucinus
ENSAMXG00000011547	prpf19	100	85.743	ENSCATG00000041921	PRPF19	100	85.743	Cercocebus_atys
ENSAMXG00000011547	prpf19	99	86.145	ENSCLAG00000003338	PRPF19	100	86.145	Chinchilla_lanigera
ENSAMXG00000011547	prpf19	100	85.743	ENSCSAG00000006254	PRPF19	100	85.743	Chlorocebus_sabaeus
ENSAMXG00000011547	prpf19	62	75.962	ENSCHOG00000005840	PRPF19	100	75.962	Choloepus_hoffmanni
ENSAMXG00000011547	prpf19	100	85.520	ENSCPBG00000027061	PRPF19	100	84.752	Chrysemys_picta_bellii
ENSAMXG00000011547	prpf19	99	68.481	ENSCING00000016625	-	100	67.946	Ciona_intestinalis
ENSAMXG00000011547	prpf19	99	70.659	ENSCSAVG00000002027	-	100	70.659	Ciona_savignyi
ENSAMXG00000011547	prpf19	99	83.660	ENSCANG00000027155	PRPF19	99	41.273	Colobus_angolensis_palliatus
ENSAMXG00000011547	prpf19	100	85.743	ENSCGRG00001002699	Prpf19	100	85.743	Cricetulus_griseus_chok1gshd
ENSAMXG00000011547	prpf19	100	85.347	ENSCGRG00000008964	Prpf19	100	85.347	Cricetulus_griseus_crigri
ENSAMXG00000011547	prpf19	100	94.653	ENSCSEG00000010411	prpf19	100	94.653	Cynoglossus_semilaevis
ENSAMXG00000011547	prpf19	100	92.871	ENSCVAG00000012011	prpf19	100	92.871	Cyprinodon_variegatus
ENSAMXG00000011547	prpf19	100	97.030	ENSDARG00000015239	prpf19	100	97.030	Danio_rerio
ENSAMXG00000011547	prpf19	100	85.743	ENSDNOG00000005797	PRPF19	100	85.743	Dasypus_novemcinctus
ENSAMXG00000011547	prpf19	100	85.545	ENSDORG00000006906	Prpf19	100	85.545	Dipodomys_ordii
ENSAMXG00000011547	prpf19	100	68.047	FBgn0261119	Prp19	99	67.129	Drosophila_melanogaster
ENSAMXG00000011547	prpf19	100	75.248	ENSETEG00000012295	PRPF19	87	89.252	Echinops_telfairi
ENSAMXG00000011547	prpf19	83	78.622	ENSEBUG00000013075	prpf19	100	77.197	Eptatretus_burgeri
ENSAMXG00000011547	prpf19	100	85.535	ENSEASG00005008056	PRPF19	98	85.535	Equus_asinus_asinus
ENSAMXG00000011547	prpf19	100	85.545	ENSECAG00000007322	PRPF19	100	85.545	Equus_caballus
ENSAMXG00000011547	prpf19	100	91.881	ENSELUG00000020276	-	100	91.881	Esox_lucius
ENSAMXG00000011547	prpf19	100	86.535	ENSELUG00000004578	prpf19	100	86.337	Esox_lucius
ENSAMXG00000011547	prpf19	100	85.545	ENSFCAG00000013668	PRPF19	100	85.545	Felis_catus
ENSAMXG00000011547	prpf19	100	84.158	ENSFALG00000012084	PRPF19	100	84.158	Ficedula_albicollis
ENSAMXG00000011547	prpf19	84	84.870	ENSFDAG00000009420	PRPF19	96	84.870	Fukomys_damarensis
ENSAMXG00000011547	prpf19	100	93.069	ENSFHEG00000022135	prpf19	100	93.069	Fundulus_heteroclitus
ENSAMXG00000011547	prpf19	100	94.455	ENSGMOG00000014756	prpf19	100	94.455	Gadus_morhua
ENSAMXG00000011547	prpf19	100	84.356	ENSGALG00000036530	PRPF19	100	84.356	Gallus_gallus
ENSAMXG00000011547	prpf19	100	92.673	ENSGAFG00000008931	prpf19	100	92.673	Gambusia_affinis
ENSAMXG00000011547	prpf19	100	94.653	ENSGACG00000017976	prpf19	100	94.653	Gasterosteus_aculeatus
ENSAMXG00000011547	prpf19	100	84.950	ENSGAGG00000013328	PRPF19	100	84.950	Gopherus_agassizii
ENSAMXG00000011547	prpf19	100	85.743	ENSGGOG00000008648	PRPF19	100	85.743	Gorilla_gorilla
ENSAMXG00000011547	prpf19	100	94.653	ENSHBUG00000008394	prpf19	100	94.653	Haplochromis_burtoni
ENSAMXG00000011547	prpf19	100	85.743	ENSHGLG00000003934	PRPF19	100	85.743	Heterocephalus_glaber_female
ENSAMXG00000011547	prpf19	99	70.118	ENSHGLG00100010649	PRPF19	100	69.277	Heterocephalus_glaber_male
ENSAMXG00000011547	prpf19	100	93.267	ENSHCOG00000016720	prpf19	100	93.267	Hippocampus_comes
ENSAMXG00000011547	prpf19	100	97.426	ENSIPUG00000013084	prpf19	100	97.426	Ictalurus_punctatus
ENSAMXG00000011547	prpf19	100	85.347	ENSSTOG00000001598	PRPF19	100	85.347	Ictidomys_tridecemlineatus
ENSAMXG00000011547	prpf19	100	85.941	ENSJJAG00000020609	Prpf19	100	85.941	Jaculus_jaculus
ENSAMXG00000011547	prpf19	100	92.673	ENSKMAG00000010257	prpf19	100	92.673	Kryptolebias_marmoratus
ENSAMXG00000011547	prpf19	100	94.455	ENSLBEG00000027436	prpf19	100	94.455	Labrus_bergylta
ENSAMXG00000011547	prpf19	100	84.752	ENSLACG00000003434	PRPF19	100	84.752	Latimeria_chalumnae
ENSAMXG00000011547	prpf19	91	80.213	ENSLOCG00000008123	prpf19	100	80.213	Lepisosteus_oculatus
ENSAMXG00000011547	prpf19	100	82.759	ENSLAFG00000002644	PRPF19	100	82.759	Loxodonta_africana
ENSAMXG00000011547	prpf19	100	85.743	ENSMFAG00000036743	PRPF19	100	85.743	Macaca_fascicularis
ENSAMXG00000011547	prpf19	100	85.743	ENSMMUG00000014530	PRPF19	100	85.743	Macaca_mulatta
ENSAMXG00000011547	prpf19	100	85.743	ENSMNEG00000044485	PRPF19	100	85.743	Macaca_nemestrina
ENSAMXG00000011547	prpf19	100	85.743	ENSMLEG00000043312	PRPF19	100	85.743	Mandrillus_leucophaeus
ENSAMXG00000011547	prpf19	100	95.050	ENSMAMG00000006843	prpf19	100	95.259	Mastacembelus_armatus
ENSAMXG00000011547	prpf19	100	94.653	ENSMZEG00005013356	prpf19	100	94.653	Maylandia_zebra
ENSAMXG00000011547	prpf19	98	79.800	ENSMGAG00000003180	PRPF19	100	79.800	Meleagris_gallopavo
ENSAMXG00000011547	prpf19	100	85.149	ENSMAUG00000012585	Prpf19	100	85.149	Mesocricetus_auratus
ENSAMXG00000011547	prpf19	100	85.743	ENSMICG00000011236	PRPF19	100	85.743	Microcebus_murinus
ENSAMXG00000011547	prpf19	100	85.743	ENSMOCG00000010383	Prpf19	100	85.743	Microtus_ochrogaster
ENSAMXG00000011547	prpf19	100	95.842	ENSMMOG00000003138	prpf19	100	95.644	Mola_mola
ENSAMXG00000011547	prpf19	100	85.743	ENSMODG00000020338	PRPF19	100	85.743	Monodelphis_domestica
ENSAMXG00000011547	prpf19	99	86.576	ENSMALG00000010981	prpf19	99	86.576	Monopterus_albus
ENSAMXG00000011547	prpf19	100	85.743	MGP_CAROLIEiJ_G0022704	Prpf19	100	85.743	Mus_caroli
ENSAMXG00000011547	prpf19	100	85.743	ENSMUSG00000024735	Prpf19	100	85.743	Mus_musculus
ENSAMXG00000011547	prpf19	100	85.743	MGP_PahariEiJ_G0014198	Prpf19	100	85.743	Mus_pahari
ENSAMXG00000011547	prpf19	100	85.743	MGP_SPRETEiJ_G0023618	Prpf19	100	85.743	Mus_spretus
ENSAMXG00000011547	prpf19	100	85.545	ENSMPUG00000014432	PRPF19	100	85.545	Mustela_putorius_furo
ENSAMXG00000011547	prpf19	100	82.885	ENSMLUG00000017597	PRPF19	100	82.885	Myotis_lucifugus
ENSAMXG00000011547	prpf19	100	85.743	ENSNGAG00000012671	Prpf19	100	85.743	Nannospalax_galili
ENSAMXG00000011547	prpf19	100	94.851	ENSNBRG00000000055	prpf19	100	94.851	Neolamprologus_brichardi
ENSAMXG00000011547	prpf19	100	85.743	ENSNLEG00000013618	PRPF19	100	85.743	Nomascus_leucogenys
ENSAMXG00000011547	prpf19	99	83.133	ENSOPRG00000008630	PRPF19	100	83.133	Ochotona_princeps
ENSAMXG00000011547	prpf19	100	86.139	ENSODEG00000004043	PRPF19	100	86.139	Octodon_degus
ENSAMXG00000011547	prpf19	100	94.851	ENSONIG00000004880	prpf19	100	94.851	Oreochromis_niloticus
ENSAMXG00000011547	prpf19	100	82.319	ENSOCUG00000015689	PRPF19	100	82.319	Oryctolagus_cuniculus
ENSAMXG00000011547	prpf19	100	93.465	ENSORLG00000004666	prpf19	100	93.465	Oryzias_latipes
ENSAMXG00000011547	prpf19	100	93.465	ENSORLG00020013561	prpf19	100	93.465	Oryzias_latipes_hni
ENSAMXG00000011547	prpf19	100	93.465	ENSORLG00015022196	prpf19	100	93.465	Oryzias_latipes_hsok
ENSAMXG00000011547	prpf19	100	93.465	ENSOMEG00000004424	prpf19	100	93.465	Oryzias_melastigma
ENSAMXG00000011547	prpf19	100	85.545	ENSOGAG00000016756	PRPF19	100	85.545	Otolemur_garnettii
ENSAMXG00000011547	prpf19	100	85.743	ENSOARG00000015596	PRPF19	100	85.743	Ovis_aries
ENSAMXG00000011547	prpf19	99	84.086	ENSPPAG00000030246	PRPF19	100	82.908	Pan_paniscus
ENSAMXG00000011547	prpf19	100	85.545	ENSPPRG00000002470	PRPF19	100	85.545	Panthera_pardus
ENSAMXG00000011547	prpf19	99	85.743	ENSPTIG00000006541	PRPF19	99	85.743	Panthera_tigris_altaica
ENSAMXG00000011547	prpf19	100	85.743	ENSPTRG00000003724	PRPF19	100	85.743	Pan_troglodytes
ENSAMXG00000011547	prpf19	100	85.743	ENSPANG00000002762	PRPF19	100	85.743	Papio_anubis
ENSAMXG00000011547	prpf19	100	95.050	ENSPKIG00000019715	prpf19	100	95.050	Paramormyrops_kingsleyae
ENSAMXG00000011547	prpf19	83	84.048	ENSPSIG00000007497	PRPF19	100	84.048	Pelodiscus_sinensis
ENSAMXG00000011547	prpf19	100	93.267	ENSPMGG00000017527	prpf19	100	93.267	Periophthalmus_magnuspinnatus
ENSAMXG00000011547	prpf19	100	85.149	ENSPEMG00000019270	Prpf19	100	85.149	Peromyscus_maniculatus_bairdii
ENSAMXG00000011547	prpf19	99	84.810	ENSPCIG00000003485	PRPF19	79	85.897	Phascolarctos_cinereus
ENSAMXG00000011547	prpf19	100	92.871	ENSPFOG00000002558	prpf19	100	92.871	Poecilia_formosa
ENSAMXG00000011547	prpf19	100	92.871	ENSPLAG00000017942	prpf19	100	92.871	Poecilia_latipinna
ENSAMXG00000011547	prpf19	100	92.871	ENSPMEG00000008638	prpf19	100	92.871	Poecilia_mexicana
ENSAMXG00000011547	prpf19	100	93.409	ENSPREG00000002489	prpf19	96	93.409	Poecilia_reticulata
ENSAMXG00000011547	prpf19	100	85.744	ENSPPYG00000003202	PRPF19	91	85.744	Pongo_abelii
ENSAMXG00000011547	prpf19	100	85.149	ENSPCAG00000001930	PRPF19	100	85.149	Procavia_capensis
ENSAMXG00000011547	prpf19	100	86.258	ENSPCOG00000014017	PRPF19	100	86.258	Propithecus_coquereli
ENSAMXG00000011547	prpf19	100	85.743	ENSPVAG00000014669	PRPF19	100	85.743	Pteropus_vampyrus
ENSAMXG00000011547	prpf19	100	94.653	ENSPNYG00000000859	prpf19	100	94.653	Pundamilia_nyererei
ENSAMXG00000011547	prpf19	100	98.812	ENSPNAG00000019245	prpf19	100	98.812	Pygocentrus_nattereri
ENSAMXG00000011547	prpf19	100	85.743	ENSRNOG00000020897	Prpf19	100	85.743	Rattus_norvegicus
ENSAMXG00000011547	prpf19	100	85.743	ENSRBIG00000036672	PRPF19	100	85.743	Rhinopithecus_bieti
ENSAMXG00000011547	prpf19	100	85.743	ENSRROG00000041572	PRPF19	100	85.743	Rhinopithecus_roxellana
ENSAMXG00000011547	prpf19	100	85.545	ENSSBOG00000022840	PRPF19	100	85.545	Saimiri_boliviensis_boliviensis
ENSAMXG00000011547	prpf19	100	85.743	ENSSHAG00000009462	PRPF19	100	85.743	Sarcophilus_harrisii
ENSAMXG00000011547	prpf19	100	93.663	ENSSFOG00015001236	prpf19	100	93.465	Scleropages_formosus
ENSAMXG00000011547	prpf19	100	95.248	ENSSMAG00000002273	prpf19	100	95.248	Scophthalmus_maximus
ENSAMXG00000011547	prpf19	100	95.644	ENSSDUG00000003299	prpf19	100	95.644	Seriola_dumerili
ENSAMXG00000011547	prpf19	100	95.644	ENSSLDG00000003019	prpf19	100	95.644	Seriola_lalandi_dorsalis
ENSAMXG00000011547	prpf19	100	84.356	ENSSPUG00000019328	PRPF19	100	84.356	Sphenodon_punctatus
ENSAMXG00000011547	prpf19	100	95.248	ENSSPAG00000008546	prpf19	100	95.248	Stegastes_partitus
ENSAMXG00000011547	prpf19	100	85.545	ENSSSCG00000013107	PRPF19	100	85.545	Sus_scrofa
ENSAMXG00000011547	prpf19	100	84.356	ENSTGUG00000006319	PRPF19	100	84.356	Taeniopygia_guttata
ENSAMXG00000011547	prpf19	100	93.861	ENSTRUG00000008502	prpf19	100	93.861	Takifugu_rubripes
ENSAMXG00000011547	prpf19	100	83.824	ENSTNIG00000014219	prpf19	100	83.824	Tetraodon_nigroviridis
ENSAMXG00000011547	prpf19	100	85.347	ENSTTRG00000012476	PRPF19	100	85.347	Tursiops_truncatus
ENSAMXG00000011547	prpf19	100	85.545	ENSUAMG00000011280	PRPF19	100	85.545	Ursus_americanus
ENSAMXG00000011547	prpf19	84	84.397	ENSUMAG00000011609	PRPF19	83	84.397	Ursus_maritimus
ENSAMXG00000011547	prpf19	99	86.154	ENSVPAG00000010516	PRPF19	100	86.154	Vicugna_pacos
ENSAMXG00000011547	prpf19	100	85.545	ENSVVUG00000005291	PRPF19	100	85.545	Vulpes_vulpes
ENSAMXG00000011547	prpf19	100	80.909	ENSXETG00000011938	prpf19	100	80.909	Xenopus_tropicalis
ENSAMXG00000011547	prpf19	100	92.871	ENSXCOG00000003141	prpf19	100	92.871	Xiphophorus_couchianus
ENSAMXG00000011547	prpf19	100	93.069	ENSXMAG00000008485	prpf19	100	93.069	Xiphophorus_maculatus