EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000011553 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
6038 bases
Position
chr24:12476100-12482137
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000011874RNA_pol_Rpb1_5PF04998.171.3e-6511
ENSAMXP00000011874RNA_pol_Rpb1_4PF05000.172.2e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000011874-1614-ENSAMXP00000011874537 (aa)-W5KWB2
Gene Model
Click here to download ENSAMXG00000011553's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011553's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000011553-7044.417ENSCING00000007684-5444.417Ciona_intestinalis
ENSAMXG00000011553-9564.728ENSCGRG00000010834Polr1a5164.728Cricetulus_griseus_crigri
ENSAMXG00000011553-9564.540MGP_CAROLIEiJ_G0028494Polr1a5660.613Mus_caroli
ENSAMXG00000011553-9465.076ENSMUSG00000049553Polr1a5561.205Mus_musculus
ENSAMXG00000011553-9465.583MGP_PahariEiJ_G0022230Polr1a5561.836Mus_pahari
ENSAMXG00000011553-9465.267MGP_SPRETEiJ_G0029499Polr1a5561.446Mus_spretus
ENSAMXG00000011553-9661.163ENSNLEG00000002264POLR1A8561.163Nomascus_leucogenys
ENSAMXG00000011553-6068.323ENSOANG00000015713-8168.323Ornithorhynchus_anatinus
ENSAMXG00000011553-9467.052ENSOMEG00000019310-9667.052Oryzias_melastigma
ENSAMXG00000011553-8766.253ENSXCOG00000007112-8866.253Xiphophorus_couchianus

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