EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000011559 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2634 bases
Position: chr24:12464356-12466989
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011881	RNA_pol_Rpb1_1	PF04997.12	3.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000011881	-	834	-	ENSAMXP00000011881	277 (aa)	-	W5KWB9

Gene Model

Click here to download ENSAMXG00000011559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011559	-	83	58.333	ENSG00000068654	POLR1A	60	72.000	Homo_sapiens
ENSAMXG00000011559	-	85	56.504	ENSCGRG00000007004	-	85	56.504	Cricetulus_griseus_crigri
ENSAMXG00000011559	-	78	53.917	ENSGAGG00000020105	-	78	53.917	Gopherus_agassizii
ENSAMXG00000011559	-	80	65.333	ENSHCOG00000003345	polr1a	84	65.333	Hippocampus_comes
ENSAMXG00000011559	-	85	58.159	MGP_CAROLIEiJ_G0028494	Polr1a	85	58.159	Mus_caroli
ENSAMXG00000011559	-	85	58.159	ENSMUSG00000049553	Polr1a	85	58.159	Mus_musculus
ENSAMXG00000011559	-	84	57.983	MGP_PahariEiJ_G0022230	Polr1a	84	57.983	Mus_pahari
ENSAMXG00000011559	-	85	58.159	MGP_SPRETEiJ_G0029499	Polr1a	85	58.159	Mus_spretus
ENSAMXG00000011559	-	80	65.766	ENSOMEG00000019264	-	79	65.766	Oryzias_melastigma
ENSAMXG00000011559	-	85	53.617	ENSSPAG00000016341	polr1a	91	53.617	Stegastes_partitus
ENSAMXG00000011559	-	84	54.701	ENSUAMG00000000099	-	83	54.701	Ursus_americanus