EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000011664 (Gene tree)
Gene ID: 103045560
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 16094 bases
Position: chr6:21792487-21808580
Accession: 103045560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000011994	KH_1	PF00013.29	3.2e-17	1	1
ENSAMXP00000031982	KH_1	PF00013.29	4.6e-17	1	1
ENSAMXP00000037605	KH_1	PF00013.29	5.1e-17	1	1
ENSAMXP00000011994	TUDOR	PF00567.24	1.6e-25	1	1
ENSAMXP00000031982	TUDOR	PF00567.24	3.2e-25	1	1
ENSAMXP00000037605	TUDOR	PF00567.24	3.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000056656	-	3713	XM_007250115	ENSAMXP00000037605	940 (aa)	XP_007250177	UPI000BBDBD16
ENSAMXT00000035020	-	3617	XM_007250116	ENSAMXP00000031982	907 (aa)	XP_007250178	UPI000BBDB780
ENSAMXT00000011994	-	2624	XM_022670354	ENSAMXP00000011994	577 (aa)	XP_022526075	W5KWN2

Gene Model

Click here to download ENSAMXG00000011664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011664	tdrkh	99	61.526	ENSAPOG00000012653	tdrkh	99	63.410	Acanthochromis_polyacanthus
ENSAMXG00000011664	tdrkh	91	59.551	ENSACIG00000010318	tdrkh	99	59.626	Amphilophus_citrinellus
ENSAMXG00000011664	tdrkh	96	61.470	ENSAOCG00000020623	tdrkh	99	62.032	Amphiprion_ocellaris
ENSAMXG00000011664	tdrkh	94	61.796	ENSAPEG00000018388	tdrkh	99	61.972	Amphiprion_percula
ENSAMXG00000011664	tdrkh	99	61.263	ENSATEG00000023809	tdrkh	99	62.230	Anabas_testudineus
ENSAMXG00000011664	tdrkh	94	59.928	ENSACLG00000003017	tdrkh	99	59.928	Astatotilapia_calliptera
ENSAMXG00000011664	tdrkh	95	57.686	ENSCSEG00000002894	tdrkh	99	59.469	Cynoglossus_semilaevis
ENSAMXG00000011664	tdrkh	58	71.707	ENSCVAG00000020347	tdrkh	77	71.707	Cyprinodon_variegatus
ENSAMXG00000011664	tdrkh	99	73.657	ENSDARG00000053474	tdrkh	99	73.657	Danio_rerio
ENSAMXG00000011664	tdrkh	99	66.949	ENSELUG00000024537	tdrkh	99	66.949	Esox_lucius
ENSAMXG00000011664	tdrkh	94	60.893	ENSFHEG00000003544	tdrkh	99	60.893	Fundulus_heteroclitus
ENSAMXG00000011664	tdrkh	99	59.138	ENSGMOG00000009304	tdrkh	99	59.138	Gadus_morhua
ENSAMXG00000011664	tdrkh	94	59.002	ENSGAFG00000010754	tdrkh	99	59.002	Gambusia_affinis
ENSAMXG00000011664	tdrkh	99	62.045	ENSGACG00000015258	tdrkh	99	62.261	Gasterosteus_aculeatus
ENSAMXG00000011664	tdrkh	94	60.650	ENSHBUG00000017609	tdrkh	99	60.650	Haplochromis_burtoni
ENSAMXG00000011664	tdrkh	94	80.474	ENSIPUG00000009673	tdrkh	99	80.474	Ictalurus_punctatus
ENSAMXG00000011664	tdrkh	93	60.838	ENSKMAG00000016638	tdrkh	93	61.302	Kryptolebias_marmoratus
ENSAMXG00000011664	tdrkh	96	59.130	ENSLBEG00000027323	tdrkh	99	59.130	Labrus_bergylta
ENSAMXG00000011664	tdrkh	99	52.843	ENSLOCG00000011381	tdrkh	99	54.035	Lepisosteus_oculatus
ENSAMXG00000011664	tdrkh	94	61.470	ENSMAMG00000020343	tdrkh	99	61.470	Mastacembelus_armatus
ENSAMXG00000011664	tdrkh	94	59.928	ENSMZEG00005006755	tdrkh	99	59.928	Maylandia_zebra
ENSAMXG00000011664	tdrkh	96	61.607	ENSMMOG00000020663	tdrkh	96	60.915	Mola_mola
ENSAMXG00000011664	tdrkh	94	60.601	ENSMALG00000015401	tdrkh	99	60.601	Monopterus_albus
ENSAMXG00000011664	tdrkh	94	58.228	ENSNBRG00000023815	tdrkh	99	58.228	Neolamprologus_brichardi
ENSAMXG00000011664	tdrkh	94	60.650	ENSORLG00000029204	tdrkh	99	60.650	Oryzias_latipes
ENSAMXG00000011664	tdrkh	88	59.961	ENSORLG00020016168	tdrkh	97	59.961	Oryzias_latipes_hni
ENSAMXG00000011664	tdrkh	91	60.561	ENSORLG00015014094	tdrkh	97	60.409	Oryzias_latipes_hsok
ENSAMXG00000011664	tdrkh	95	58.484	ENSOMEG00000015063	tdrkh	92	58.484	Oryzias_melastigma
ENSAMXG00000011664	tdrkh	98	60.139	ENSPKIG00000017597	tdrkh	99	63.521	Paramormyrops_kingsleyae
ENSAMXG00000011664	tdrkh	94	59.091	ENSPMGG00000019362	tdrkh	99	59.091	Periophthalmus_magnuspinnatus
ENSAMXG00000011664	tdrkh	99	58.714	ENSPFOG00000013032	tdrkh	99	58.714	Poecilia_formosa
ENSAMXG00000011664	tdrkh	94	59.431	ENSPLAG00000004193	tdrkh	99	59.431	Poecilia_latipinna
ENSAMXG00000011664	tdrkh	94	59.431	ENSPMEG00000016502	tdrkh	99	59.431	Poecilia_mexicana
ENSAMXG00000011664	tdrkh	99	57.216	ENSPREG00000004213	tdrkh	99	57.216	Poecilia_reticulata
ENSAMXG00000011664	tdrkh	91	59.594	ENSPNYG00000022818	tdrkh	97	59.669	Pundamilia_nyererei
ENSAMXG00000011664	tdrkh	99	85.789	ENSPNAG00000008783	tdrkh	99	85.789	Pygocentrus_nattereri
ENSAMXG00000011664	tdrkh	94	61.020	ENSSFOG00015001048	tdrkh	99	61.020	Scleropages_formosus
ENSAMXG00000011664	tdrkh	96	61.441	ENSSMAG00000001532	tdrkh	99	62.590	Scophthalmus_maximus
ENSAMXG00000011664	tdrkh	94	61.239	ENSSDUG00000013393	tdrkh	99	61.989	Seriola_dumerili
ENSAMXG00000011664	tdrkh	99	61.074	ENSSLDG00000017418	tdrkh	99	61.307	Seriola_lalandi_dorsalis
ENSAMXG00000011664	tdrkh	99	61.681	ENSSPAG00000006435	tdrkh	99	61.681	Stegastes_partitus
ENSAMXG00000011664	tdrkh	91	56.852	ENSTRUG00000006644	tdrkh	97	56.852	Takifugu_rubripes
ENSAMXG00000011664	tdrkh	94	57.679	ENSTNIG00000003157	tdrkh	99	57.679	Tetraodon_nigroviridis
ENSAMXG00000011664	tdrkh	75	75.630	ENSXCOG00000016972	tdrkh	99	75.630	Xiphophorus_couchianus
ENSAMXG00000011664	tdrkh	94	58.214	ENSXMAG00000014756	tdrkh	99	58.214	Xiphophorus_maculatus