EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000011888 (Gene tree)
Gene ID: 103038611
Gene Symbol: mrpl47
Alias: id:ibd1090
Full Name: mitochondrial ribosomal protein L47
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4463 bases
Position: chrAPWO02000181.1:784507-788969
Accession: 103038611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012221	MRP-L47	PF06984.13	1.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012221	-	841	XM_007236645	ENSAMXP00000012221	250 (aa)	XP_007236707	W5KXA9

Gene Model

Click here to download ENSAMXG00000011888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000011888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000011888	mrpl47	96	54.733	ENSG00000136522	MRPL47	92	58.140	Homo_sapiens
ENSAMXG00000011888	mrpl47	99	57.977	ENSAPOG00000014123	mrpl47	76	69.000	Acanthochromis_polyacanthus
ENSAMXG00000011888	mrpl47	90	54.911	ENSAMEG00000010876	MRPL47	86	57.143	Ailuropoda_melanoleuca
ENSAMXG00000011888	mrpl47	98	60.956	ENSACIG00000012703	mrpl47	73	75.000	Amphilophus_citrinellus
ENSAMXG00000011888	mrpl47	99	57.977	ENSAOCG00000008347	mrpl47	76	68.000	Amphiprion_ocellaris
ENSAMXG00000011888	mrpl47	99	57.977	ENSAPEG00000005830	mrpl47	76	68.000	Amphiprion_percula
ENSAMXG00000011888	mrpl47	97	60.400	ENSATEG00000009838	mrpl47	73	72.487	Anabas_testudineus
ENSAMXG00000011888	mrpl47	74	63.784	ENSAPLG00000011793	MRPL47	89	63.784	Anas_platyrhynchos
ENSAMXG00000011888	mrpl47	64	66.460	ENSACAG00000004517	MRPL47	95	66.460	Anolis_carolinensis
ENSAMXG00000011888	mrpl47	97	52.066	ENSANAG00000037296	-	75	60.428	Aotus_nancymaae
ENSAMXG00000011888	mrpl47	96	46.914	ENSANAG00000029476	-	72	54.011	Aotus_nancymaae
ENSAMXG00000011888	mrpl47	99	60.400	ENSACLG00000019621	mrpl47	80	69.500	Astatotilapia_calliptera
ENSAMXG00000011888	mrpl47	96	52.191	ENSBTAG00000002462	MRPL47	75	61.905	Bos_taurus
ENSAMXG00000011888	mrpl47	50	40.625	WBGene00015092	mrpl-47	59	40.625	Caenorhabditis_elegans
ENSAMXG00000011888	mrpl47	96	53.279	ENSCJAG00000013028	-	76	62.434	Callithrix_jacchus
ENSAMXG00000011888	mrpl47	96	50.206	ENSCJAG00000014820	-	75	58.730	Callithrix_jacchus
ENSAMXG00000011888	mrpl47	76	64.550	ENSCAFG00000011380	MRPL47	75	64.550	Canis_familiaris
ENSAMXG00000011888	mrpl47	76	64.550	ENSCAFG00020023127	MRPL47	75	64.550	Canis_lupus_dingo
ENSAMXG00000011888	mrpl47	96	53.386	ENSCHIG00000013922	MRPL47	75	62.963	Capra_hircus
ENSAMXG00000011888	mrpl47	96	54.918	ENSTSYG00000001541	-	84	58.294	Carlito_syrichta
ENSAMXG00000011888	mrpl47	96	48.560	ENSTSYG00000032115	-	85	55.556	Carlito_syrichta
ENSAMXG00000011888	mrpl47	96	53.061	ENSCPOG00000002312	-	75	62.434	Cavia_porcellus
ENSAMXG00000011888	mrpl47	96	47.083	ENSCPOG00000024304	-	79	55.556	Cavia_porcellus
ENSAMXG00000011888	mrpl47	96	53.909	ENSCCAG00000037348	MRPL47	76	62.434	Cebus_capucinus
ENSAMXG00000011888	mrpl47	96	52.675	ENSCATG00000020336	-	76	60.317	Cercocebus_atys
ENSAMXG00000011888	mrpl47	96	42.798	ENSCATG00000029931	-	72	48.148	Cercocebus_atys
ENSAMXG00000011888	mrpl47	96	54.583	ENSCLAG00000017681	-	84	58.294	Chinchilla_lanigera
ENSAMXG00000011888	mrpl47	96	53.333	ENSCLAG00000015039	-	75	62.434	Chinchilla_lanigera
ENSAMXG00000011888	mrpl47	96	54.583	ENSCLAG00000017678	-	84	58.294	Chinchilla_lanigera
ENSAMXG00000011888	mrpl47	96	55.144	ENSCSAG00000013046	-	76	63.492	Chlorocebus_sabaeus
ENSAMXG00000011888	mrpl47	96	50.206	ENSCSAG00000010884	-	74	58.201	Chlorocebus_sabaeus
ENSAMXG00000011888	mrpl47	96	51.383	ENSCPBG00000026934	MRPL47	90	56.422	Chrysemys_picta_bellii
ENSAMXG00000011888	mrpl47	69	44.767	ENSCING00000001800	-	60	44.767	Ciona_intestinalis
ENSAMXG00000011888	mrpl47	58	55.034	ENSCANG00000041627	MRPL47	70	47.090	Colobus_angolensis_palliatus
ENSAMXG00000011888	mrpl47	96	52.846	ENSCGRG00001015111	Mrpl47	76	62.632	Cricetulus_griseus_chok1gshd
ENSAMXG00000011888	mrpl47	96	52.846	ENSCGRG00000017426	Mrpl47	76	62.632	Cricetulus_griseus_crigri
ENSAMXG00000011888	mrpl47	97	58.800	ENSCSEG00000013581	mrpl47	76	67.513	Cynoglossus_semilaevis
ENSAMXG00000011888	mrpl47	78	70.256	ENSCVAG00000007629	mrpl47	75	70.256	Cyprinodon_variegatus
ENSAMXG00000011888	mrpl47	100	65.476	ENSDARG00000075743	mrpl47	96	65.145	Danio_rerio
ENSAMXG00000011888	mrpl47	96	53.036	ENSDNOG00000015052	MRPL47	86	57.273	Dasypus_novemcinctus
ENSAMXG00000011888	mrpl47	68	65.680	ENSDORG00000007650	Mrpl47	81	63.784	Dipodomys_ordii
ENSAMXG00000011888	mrpl47	55	49.635	FBgn0014023	mRpL47	51	49.635	Drosophila_melanogaster
ENSAMXG00000011888	mrpl47	96	51.406	ENSETEG00000019362	MRPL47	75	60.847	Echinops_telfairi
ENSAMXG00000011888	mrpl47	76	57.812	ENSEBUG00000014208	mrpl47	77	57.812	Eptatretus_burgeri
ENSAMXG00000011888	mrpl47	96	53.750	ENSEASG00005016858	MRPL47	75	62.963	Equus_asinus_asinus
ENSAMXG00000011888	mrpl47	96	55.144	ENSECAG00000018545	MRPL47	76	63.492	Equus_caballus
ENSAMXG00000011888	mrpl47	66	57.317	ENSEEUG00000012255	MRPL47	65	57.317	Erinaceus_europaeus
ENSAMXG00000011888	mrpl47	100	60.311	ENSELUG00000004619	mrpl47	99	60.311	Esox_lucius
ENSAMXG00000011888	mrpl47	97	52.400	ENSFCAG00000039093	MRPL47	77	62.500	Felis_catus
ENSAMXG00000011888	mrpl47	76	63.492	ENSFALG00000008365	MRPL47	88	63.492	Ficedula_albicollis
ENSAMXG00000011888	mrpl47	96	54.098	ENSFDAG00000014402	MRPL47	76	63.492	Fukomys_damarensis
ENSAMXG00000011888	mrpl47	98	57.647	ENSFHEG00000007456	mrpl47	75	68.000	Fundulus_heteroclitus
ENSAMXG00000011888	mrpl47	96	61.157	ENSGMOG00000017332	mrpl47	99	59.336	Gadus_morhua
ENSAMXG00000011888	mrpl47	90	56.444	ENSGALG00000013759	MRPL47	75	62.567	Gallus_gallus
ENSAMXG00000011888	mrpl47	98	56.863	ENSGAFG00000013445	mrpl47	78	66.667	Gambusia_affinis
ENSAMXG00000011888	mrpl47	95	61.345	ENSGACG00000009992	mrpl47	82	70.984	Gasterosteus_aculeatus
ENSAMXG00000011888	mrpl47	96	53.112	ENSGAGG00000016462	MRPL47	80	60.513	Gopherus_agassizii
ENSAMXG00000011888	mrpl47	96	54.321	ENSGGOG00000027171	MRPL47	86	62.434	Gorilla_gorilla
ENSAMXG00000011888	mrpl47	99	59.375	ENSHBUG00000022567	mrpl47	75	69.500	Haplochromis_burtoni
ENSAMXG00000011888	mrpl47	96	52.917	ENSHGLG00000013945	MRPL47	76	61.905	Heterocephalus_glaber_female
ENSAMXG00000011888	mrpl47	96	46.502	ENSHGLG00000012776	-	74	53.439	Heterocephalus_glaber_female
ENSAMXG00000011888	mrpl47	96	52.917	ENSHGLG00100003873	MRPL47	76	61.905	Heterocephalus_glaber_male
ENSAMXG00000011888	mrpl47	80	49.020	ENSHGLG00100018544	-	72	51.323	Heterocephalus_glaber_male
ENSAMXG00000011888	mrpl47	99	60.156	ENSHCOG00000018946	mrpl47	97	61.200	Hippocampus_comes
ENSAMXG00000011888	mrpl47	96	72.500	ENSIPUG00000009200	mrpl47	100	72.908	Ictalurus_punctatus
ENSAMXG00000011888	mrpl47	96	53.333	ENSJJAG00000020002	Mrpl47	75	61.905	Jaculus_jaculus
ENSAMXG00000011888	mrpl47	97	59.836	ENSKMAG00000022044	mrpl47	94	60.924	Kryptolebias_marmoratus
ENSAMXG00000011888	mrpl47	99	62.205	ENSLBEG00000027302	mrpl47	85	62.903	Labrus_bergylta
ENSAMXG00000011888	mrpl47	100	55.159	ENSLACG00000014781	MRPL47	84	61.792	Latimeria_chalumnae
ENSAMXG00000011888	mrpl47	99	58.167	ENSLOCG00000001289	mrpl47	99	56.972	Lepisosteus_oculatus
ENSAMXG00000011888	mrpl47	96	52.610	ENSLAFG00000018470	MRPL47	94	52.459	Loxodonta_africana
ENSAMXG00000011888	mrpl47	76	62.434	ENSMFAG00000000293	MRPL47	86	62.434	Macaca_fascicularis
ENSAMXG00000011888	mrpl47	76	58.421	ENSMFAG00000039679	-	86	58.421	Macaca_fascicularis
ENSAMXG00000011888	mrpl47	96	54.321	ENSMMUG00000009744	MRPL47	76	62.434	Macaca_mulatta
ENSAMXG00000011888	mrpl47	96	45.267	ENSMNEG00000043074	-	84	50.265	Macaca_nemestrina
ENSAMXG00000011888	mrpl47	96	54.321	ENSMNEG00000001870	-	86	62.434	Macaca_nemestrina
ENSAMXG00000011888	mrpl47	76	60.317	ENSMLEG00000036668	-	85	60.317	Mandrillus_leucophaeus
ENSAMXG00000011888	mrpl47	96	49.383	ENSMLEG00000035312	-	72	56.085	Mandrillus_leucophaeus
ENSAMXG00000011888	mrpl47	98	61.885	ENSMAMG00000006129	mrpl47	82	62.605	Mastacembelus_armatus
ENSAMXG00000011888	mrpl47	99	59.375	ENSMZEG00005002155	mrpl47	77	69.500	Maylandia_zebra
ENSAMXG00000011888	mrpl47	96	52.917	ENSMAUG00000010772	Mrpl47	76	62.105	Mesocricetus_auratus
ENSAMXG00000011888	mrpl47	98	52.000	ENSMICG00000049377	MRPL47	75	60.317	Microcebus_murinus
ENSAMXG00000011888	mrpl47	96	43.725	ENSMOCG00000001968	-	72	49.730	Microtus_ochrogaster
ENSAMXG00000011888	mrpl47	96	51.613	ENSMOCG00000007933	-	78	61.224	Microtus_ochrogaster
ENSAMXG00000011888	mrpl47	99	56.400	ENSMMOG00000019550	mrpl47	78	76.404	Mola_mola
ENSAMXG00000011888	mrpl47	78	59.487	ENSMODG00000021301	MRPL47	87	59.487	Monodelphis_domestica
ENSAMXG00000011888	mrpl47	97	61.475	ENSMALG00000017640	mrpl47	73	69.588	Monopterus_albus
ENSAMXG00000011888	mrpl47	96	54.582	MGP_CAROLIEiJ_G0024921	Mrpl47	87	57.658	Mus_caroli
ENSAMXG00000011888	mrpl47	96	53.226	ENSMUSG00000037531	Mrpl47	75	61.579	Mus_musculus
ENSAMXG00000011888	mrpl47	96	53.226	MGP_PahariEiJ_G0026366	Mrpl47	75	62.632	Mus_pahari
ENSAMXG00000011888	mrpl47	96	53.629	MGP_SPRETEiJ_G0025855	Mrpl47	75	62.105	Mus_spretus
ENSAMXG00000011888	mrpl47	89	54.709	ENSMPUG00000017214	MRPL47	75	62.963	Mustela_putorius_furo
ENSAMXG00000011888	mrpl47	96	55.144	ENSMLUG00000000996	MRPL47	74	63.492	Myotis_lucifugus
ENSAMXG00000011888	mrpl47	96	53.629	ENSNGAG00000022354	Mrpl47	77	60.622	Nannospalax_galili
ENSAMXG00000011888	mrpl47	99	59.766	ENSNBRG00000004178	mrpl47	77	70.500	Neolamprologus_brichardi
ENSAMXG00000011888	mrpl47	99	59.766	ENSNBRG00000017251	mrpl47	77	70.500	Neolamprologus_brichardi
ENSAMXG00000011888	mrpl47	96	53.750	ENSNLEG00000005831	MRPL47	86	62.963	Nomascus_leucogenys
ENSAMXG00000011888	mrpl47	79	53.299	ENSMEUG00000012649	-	96	53.299	Notamacropus_eugenii
ENSAMXG00000011888	mrpl47	85	49.315	ENSOPRG00000007831	MRPL47	88	53.439	Ochotona_princeps
ENSAMXG00000011888	mrpl47	96	49.383	ENSODEG00000017632	-	75	57.143	Octodon_degus
ENSAMXG00000011888	mrpl47	70	56.250	ENSODEG00000002762	-	80	56.250	Octodon_degus
ENSAMXG00000011888	mrpl47	99	58.984	ENSONIG00000001683	mrpl47	77	70.000	Oreochromis_niloticus
ENSAMXG00000011888	mrpl47	75	60.963	ENSOANG00000002136	-	78	60.209	Ornithorhynchus_anatinus
ENSAMXG00000011888	mrpl47	96	56.275	ENSOCUG00000017886	MRPL47	75	65.079	Oryctolagus_cuniculus
ENSAMXG00000011888	mrpl47	92	60.084	ENSORLG00000023413	mrpl47	74	71.053	Oryzias_latipes
ENSAMXG00000011888	mrpl47	92	60.504	ENSORLG00020021449	mrpl47	74	71.579	Oryzias_latipes_hni
ENSAMXG00000011888	mrpl47	71	72.881	ENSORLG00015018692	mrpl47	74	71.053	Oryzias_latipes_hsok
ENSAMXG00000011888	mrpl47	98	58.730	ENSOMEG00000014147	mrpl47	76	70.256	Oryzias_melastigma
ENSAMXG00000011888	mrpl47	96	53.061	ENSOGAG00000016957	MRPL47	75	62.567	Otolemur_garnettii
ENSAMXG00000011888	mrpl47	96	53.386	ENSOARG00000020692	MRPL47	75	62.963	Ovis_aries
ENSAMXG00000011888	mrpl47	96	54.321	ENSPPAG00000028033	MRPL47	86	62.434	Pan_paniscus
ENSAMXG00000011888	mrpl47	97	52.209	ENSPPRG00000000050	MRPL47	94	57.576	Panthera_pardus
ENSAMXG00000011888	mrpl47	77	62.500	ENSPTIG00000007879	MRPL47	76	62.500	Panthera_tigris_altaica
ENSAMXG00000011888	mrpl47	96	54.321	ENSPTRG00000015648	MRPL47	86	62.434	Pan_troglodytes
ENSAMXG00000011888	mrpl47	96	54.321	ENSPANG00000008191	MRPL47	86	62.434	Papio_anubis
ENSAMXG00000011888	mrpl47	100	56.800	ENSPKIG00000012608	mrpl47	76	66.667	Paramormyrops_kingsleyae
ENSAMXG00000011888	mrpl47	76	62.304	ENSPSIG00000011536	MRPL47	80	62.304	Pelodiscus_sinensis
ENSAMXG00000011888	mrpl47	80	65.500	ENSPMAG00000001838	mrpl47	79	65.500	Petromyzon_marinus
ENSAMXG00000011888	mrpl47	75	51.064	ENSPCIG00000026899	-	70	51.064	Phascolarctos_cinereus
ENSAMXG00000011888	mrpl47	98	51.181	ENSPCIG00000006780	-	79	59.487	Phascolarctos_cinereus
ENSAMXG00000011888	mrpl47	98	56.126	ENSPFOG00000014965	mrpl47	78	65.672	Poecilia_formosa
ENSAMXG00000011888	mrpl47	98	56.078	ENSPLAG00000011483	mrpl47	78	65.672	Poecilia_latipinna
ENSAMXG00000011888	mrpl47	98	56.126	ENSPMEG00000012490	mrpl47	78	65.672	Poecilia_mexicana
ENSAMXG00000011888	mrpl47	98	56.471	ENSPREG00000015080	mrpl47	78	66.169	Poecilia_reticulata
ENSAMXG00000011888	mrpl47	96	54.733	ENSPPYG00000014321	MRPL47	76	62.434	Pongo_abelii
ENSAMXG00000011888	mrpl47	75	62.032	ENSPCAG00000016517	MRPL47	86	62.032	Procavia_capensis
ENSAMXG00000011888	mrpl47	76	61.905	ENSPCOG00000019367	MRPL47	76	61.905	Propithecus_coquereli
ENSAMXG00000011888	mrpl47	96	53.600	ENSPVAG00000004284	MRPL47	94	52.846	Pteropus_vampyrus
ENSAMXG00000011888	mrpl47	99	58.984	ENSPNYG00000005479	mrpl47	77	69.000	Pundamilia_nyererei
ENSAMXG00000011888	mrpl47	98	75.000	ENSPNAG00000026692	mrpl47	97	75.000	Pygocentrus_nattereri
ENSAMXG00000011888	mrpl47	96	52.419	ENSRNOG00000011639	Mrpl47	75	61.579	Rattus_norvegicus
ENSAMXG00000011888	mrpl47	92	54.936	ENSRBIG00000030725	MRPL47	76	63.687	Rhinopithecus_bieti
ENSAMXG00000011888	mrpl47	96	54.733	ENSRROG00000034003	MRPL47	86	62.963	Rhinopithecus_roxellana
ENSAMXG00000011888	mrpl47	96	53.086	ENSSBOG00000018241	MRPL47	76	61.905	Saimiri_boliviensis_boliviensis
ENSAMXG00000011888	mrpl47	96	51.230	ENSSHAG00000017273	MRPL47	82	58.500	Sarcophilus_harrisii
ENSAMXG00000011888	mrpl47	90	64.732	ENSSFOG00015017849	mrpl47	79	66.509	Scleropages_formosus
ENSAMXG00000011888	mrpl47	98	60.317	ENSSMAG00000003013	mrpl47	72	71.282	Scophthalmus_maximus
ENSAMXG00000011888	mrpl47	98	61.265	ENSSDUG00000003140	mrpl47	75	71.795	Seriola_dumerili
ENSAMXG00000011888	mrpl47	98	61.265	ENSSLDG00000017795	mrpl47	75	71.795	Seriola_lalandi_dorsalis
ENSAMXG00000011888	mrpl47	98	51.181	ENSSARG00000006898	-	76	60.526	Sorex_araneus
ENSAMXG00000011888	mrpl47	97	52.675	ENSSPUG00000014635	MRPL47	80	60.000	Sphenodon_punctatus
ENSAMXG00000011888	mrpl47	99	57.752	ENSSPAG00000002660	mrpl47	76	68.657	Stegastes_partitus
ENSAMXG00000011888	mrpl47	96	52.439	ENSSSCG00000011763	MRPL47	75	62.434	Sus_scrofa
ENSAMXG00000011888	mrpl47	64	62.893	ENSTGUG00000014708	-	98	62.893	Taeniopygia_guttata
ENSAMXG00000011888	mrpl47	76	62.963	ENSTGUG00000010649	-	88	62.963	Taeniopygia_guttata
ENSAMXG00000011888	mrpl47	99	56.522	ENSTRUG00000017597	mrpl47	85	63.551	Takifugu_rubripes
ENSAMXG00000011888	mrpl47	82	69.268	ENSTNIG00000015545	mrpl47	91	69.268	Tetraodon_nigroviridis
ENSAMXG00000011888	mrpl47	76	51.323	ENSTBEG00000004852	-	86	51.323	Tupaia_belangeri
ENSAMXG00000011888	mrpl47	96	47.325	ENSTTRG00000008909	MRPL47	76	53.439	Tursiops_truncatus
ENSAMXG00000011888	mrpl47	69	65.698	ENSUAMG00000007563	MRPL47	85	62.963	Ursus_americanus
ENSAMXG00000011888	mrpl47	89	55.157	ENSUMAG00000007554	MRPL47	75	62.963	Ursus_maritimus
ENSAMXG00000011888	mrpl47	96	54.167	ENSVPAG00000006633	MRPL47	76	62.963	Vicugna_pacos
ENSAMXG00000011888	mrpl47	76	64.550	ENSVVUG00000004837	MRPL47	75	64.550	Vulpes_vulpes
ENSAMXG00000011888	mrpl47	52	57.364	ENSXETG00000029930	MRPL47	96	57.364	Xenopus_tropicalis
ENSAMXG00000011888	mrpl47	80	67.164	ENSXCOG00000002915	mrpl47	78	67.164	Xiphophorus_couchianus
ENSAMXG00000011888	mrpl47	98	58.431	ENSXMAG00000018249	mrpl47	77	68.500	Xiphophorus_maculatus