EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012026 (Gene tree)
Gene ID: 103032882
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12699 bases
Position: chrAPWO02000034.1:6587133-6599831
Accession: 103032882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012368	TRM	PF02005.16	3.6e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012368	-	4764	XM_007229994	ENSAMXP00000012368	667 (aa)	XP_007230056	W5KXQ6

Gene Model

Click here to download ENSAMXG00000012026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012026	trmt1	85	67.820	ENSG00000104907	TRMT1	100	73.958	Homo_sapiens
ENSAMXG00000012026	trmt1	89	66.335	ENSAMEG00000012598	TRMT1	88	66.335	Ailuropoda_melanoleuca
ENSAMXG00000012026	trmt1	94	68.800	ENSACIG00000018680	trmt1	96	68.800	Amphilophus_citrinellus
ENSAMXG00000012026	trmt1	97	74.383	ENSAOCG00000006781	trmt1	95	74.383	Amphiprion_ocellaris
ENSAMXG00000012026	trmt1	97	74.383	ENSAPEG00000007712	trmt1	95	74.383	Amphiprion_percula
ENSAMXG00000012026	trmt1	93	78.444	ENSATEG00000001872	trmt1	91	78.444	Anabas_testudineus
ENSAMXG00000012026	trmt1	90	64.725	ENSACAG00000003825	TRMT1	96	64.725	Anolis_carolinensis
ENSAMXG00000012026	trmt1	85	66.436	ENSANAG00000023016	TRMT1	92	66.436	Aotus_nancymaae
ENSAMXG00000012026	trmt1	88	77.911	ENSACLG00000010073	trmt1	95	77.911	Astatotilapia_calliptera
ENSAMXG00000012026	trmt1	89	65.563	ENSBTAG00000019325	TRMT1	84	65.563	Bos_taurus
ENSAMXG00000012026	trmt1	78	41.729	WBGene00006613	trm-1	94	41.729	Caenorhabditis_elegans
ENSAMXG00000012026	trmt1	85	65.517	ENSCJAG00000004566	TRMT1	88	65.517	Callithrix_jacchus
ENSAMXG00000012026	trmt1	85	68.056	ENSCAFG00000017070	TRMT1	90	68.056	Canis_familiaris
ENSAMXG00000012026	trmt1	85	67.652	ENSCAFG00020005397	TRMT1	88	67.596	Canis_lupus_dingo
ENSAMXG00000012026	trmt1	86	66.838	ENSCHIG00000013569	TRMT1	87	66.838	Capra_hircus
ENSAMXG00000012026	trmt1	85	64.828	ENSTSYG00000003207	TRMT1	87	64.828	Carlito_syrichta
ENSAMXG00000012026	trmt1	81	62.088	ENSCAPG00000003355	TRMT1	96	62.088	Cavia_aperea
ENSAMXG00000012026	trmt1	87	65.306	ENSCPOG00000011754	TRMT1	88	65.306	Cavia_porcellus
ENSAMXG00000012026	trmt1	85	65.398	ENSCCAG00000022263	TRMT1	92	65.398	Cebus_capucinus
ENSAMXG00000012026	trmt1	70	56.000	ENSCATG00000038220	-	85	56.000	Cercocebus_atys
ENSAMXG00000012026	trmt1	85	68.166	ENSCATG00000039850	TRMT1	87	68.166	Cercocebus_atys
ENSAMXG00000012026	trmt1	85	67.826	ENSCLAG00000015295	TRMT1	89	65.157	Chinchilla_lanigera
ENSAMXG00000012026	trmt1	71	70.564	ENSCSAG00000006500	TRMT1	89	70.564	Chlorocebus_sabaeus
ENSAMXG00000012026	trmt1	89	66.275	ENSCPBG00000023866	TRMT1	89	67.337	Chrysemys_picta_bellii
ENSAMXG00000012026	trmt1	82	47.920	ENSCING00000002884	-	97	47.920	Ciona_intestinalis
ENSAMXG00000012026	trmt1	81	49.635	ENSCSAVG00000010927	-	100	49.262	Ciona_savignyi
ENSAMXG00000012026	trmt1	83	53.501	ENSCANG00000031650	-	87	53.501	Colobus_angolensis_palliatus
ENSAMXG00000012026	trmt1	85	53.368	ENSCANG00000040631	TRMT1	87	53.368	Colobus_angolensis_palliatus
ENSAMXG00000012026	trmt1	85	66.318	ENSCGRG00001022594	Trmt1	87	66.028	Cricetulus_griseus_chok1gshd
ENSAMXG00000012026	trmt1	85	66.318	ENSCGRG00000017732	Trmt1	86	66.028	Cricetulus_griseus_crigri
ENSAMXG00000012026	trmt1	94	73.668	ENSCSEG00000001643	trmt1	94	75.130	Cynoglossus_semilaevis
ENSAMXG00000012026	trmt1	93	76.414	ENSCVAG00000011886	trmt1	93	76.414	Cyprinodon_variegatus
ENSAMXG00000012026	trmt1	93	79.585	ENSDARG00000010978	trmt1	93	79.904	Danio_rerio
ENSAMXG00000012026	trmt1	78	45.880	ENSDNOG00000048240	-	89	45.880	Dasypus_novemcinctus
ENSAMXG00000012026	trmt1	92	63.403	ENSDORG00000014298	Trmt1	91	63.403	Dipodomys_ordii
ENSAMXG00000012026	trmt1	81	47.016	FBgn0032430	CG6388	92	47.016	Drosophila_melanogaster
ENSAMXG00000012026	trmt1	82	50.366	ENSEBUG00000003449	trmt1	80	50.545	Eptatretus_burgeri
ENSAMXG00000012026	trmt1	85	67.014	ENSEASG00005004050	TRMT1	90	67.014	Equus_asinus_asinus
ENSAMXG00000012026	trmt1	85	67.188	ENSECAG00000016149	TRMT1	90	67.188	Equus_caballus
ENSAMXG00000012026	trmt1	59	55.696	ENSEEUG00000014102	-	100	55.696	Erinaceus_europaeus
ENSAMXG00000012026	trmt1	93	72.828	ENSELUG00000021659	trmt1	94	72.828	Esox_lucius
ENSAMXG00000012026	trmt1	85	67.474	ENSFCAG00000000483	TRMT1	87	67.474	Felis_catus
ENSAMXG00000012026	trmt1	85	67.188	ENSFDAG00000007386	TRMT1	87	67.188	Fukomys_damarensis
ENSAMXG00000012026	trmt1	89	73.235	ENSFHEG00000012865	trmt1	99	73.235	Fundulus_heteroclitus
ENSAMXG00000012026	trmt1	86	69.861	ENSGMOG00000006564	trmt1	99	70.209	Gadus_morhua
ENSAMXG00000012026	trmt1	92	76.603	ENSGAFG00000011862	trmt1	97	76.763	Gambusia_affinis
ENSAMXG00000012026	trmt1	86	76.042	ENSGACG00000000227	trmt1	93	76.736	Gasterosteus_aculeatus
ENSAMXG00000012026	trmt1	87	68.041	ENSGAGG00000016432	TRMT1	86	68.041	Gopherus_agassizii
ENSAMXG00000012026	trmt1	85	67.820	ENSGGOG00000014007	TRMT1	87	67.820	Gorilla_gorilla
ENSAMXG00000012026	trmt1	83	69.550	ENSHBUG00000008821	trmt1	92	69.550	Haplochromis_burtoni
ENSAMXG00000012026	trmt1	85	66.551	ENSHGLG00000015972	TRMT1	87	66.551	Heterocephalus_glaber_female
ENSAMXG00000012026	trmt1	85	62.392	ENSHGLG00100018112	TRMT1	87	62.392	Heterocephalus_glaber_male
ENSAMXG00000012026	trmt1	90	73.167	ENSHCOG00000009447	trmt1	93	73.167	Hippocampus_comes
ENSAMXG00000012026	trmt1	90	79.642	ENSIPUG00000002899	trmt1	89	80.131	Ictalurus_punctatus
ENSAMXG00000012026	trmt1	85	66.898	ENSSTOG00000012531	TRMT1	88	66.898	Ictidomys_tridecemlineatus
ENSAMXG00000012026	trmt1	85	66.667	ENSJJAG00000017154	Trmt1	88	66.667	Jaculus_jaculus
ENSAMXG00000012026	trmt1	93	75.758	ENSKMAG00000011809	trmt1	96	78.819	Kryptolebias_marmoratus
ENSAMXG00000012026	trmt1	92	76.384	ENSLBEG00000012703	trmt1	93	74.568	Labrus_bergylta
ENSAMXG00000012026	trmt1	86	61.698	ENSLACG00000014585	TRMT1	95	61.368	Latimeria_chalumnae
ENSAMXG00000012026	trmt1	88	68.367	ENSLOCG00000006479	trmt1	100	68.367	Lepisosteus_oculatus
ENSAMXG00000012026	trmt1	85	67.301	ENSLAFG00000014072	TRMT1	88	67.301	Loxodonta_africana
ENSAMXG00000012026	trmt1	85	68.166	ENSMFAG00000033143	TRMT1	87	68.166	Macaca_fascicularis
ENSAMXG00000012026	trmt1	85	63.731	ENSMMUG00000001167	TRMT1	87	63.731	Macaca_mulatta
ENSAMXG00000012026	trmt1	85	67.820	ENSMNEG00000037867	TRMT1	87	67.820	Macaca_nemestrina
ENSAMXG00000012026	trmt1	85	67.993	ENSMLEG00000016142	TRMT1	87	67.993	Mandrillus_leucophaeus
ENSAMXG00000012026	trmt1	94	76.108	ENSMAMG00000004357	trmt1	94	76.108	Mastacembelus_armatus
ENSAMXG00000012026	trmt1	91	75.614	ENSMZEG00005014510	trmt1	92	75.614	Maylandia_zebra
ENSAMXG00000012026	trmt1	86	65.571	ENSMAUG00000011134	Trmt1	87	65.571	Mesocricetus_auratus
ENSAMXG00000012026	trmt1	85	68.339	ENSMICG00000000793	TRMT1	87	68.339	Microcebus_murinus
ENSAMXG00000012026	trmt1	87	65.470	ENSMOCG00000015895	Trmt1	88	65.812	Microtus_ochrogaster
ENSAMXG00000012026	trmt1	94	74.679	ENSMMOG00000011097	trmt1	99	74.679	Mola_mola
ENSAMXG00000012026	trmt1	86	68.111	ENSMODG00000011619	TRMT1	93	68.111	Monodelphis_domestica
ENSAMXG00000012026	trmt1	87	67.406	MGP_CAROLIEiJ_G0031304	Trmt1	88	67.406	Mus_caroli
ENSAMXG00000012026	trmt1	92	64.172	ENSMUSG00000001909	Trmt1	94	64.172	Mus_musculus
ENSAMXG00000012026	trmt1	92	64.013	MGP_SPRETEiJ_G0032422	Trmt1	94	64.013	Mus_spretus
ENSAMXG00000012026	trmt1	85	68.229	ENSMPUG00000004210	TRMT1	82	68.229	Mustela_putorius_furo
ENSAMXG00000012026	trmt1	86	68.103	ENSMLUG00000012809	TRMT1	86	68.103	Myotis_lucifugus
ENSAMXG00000012026	trmt1	86	65.690	ENSNGAG00000022486	Trmt1	87	65.690	Nannospalax_galili
ENSAMXG00000012026	trmt1	76	80.882	ENSNBRG00000024376	trmt1	87	80.882	Neolamprologus_brichardi
ENSAMXG00000012026	trmt1	68	66.443	ENSNLEG00000013019	-	84	66.443	Nomascus_leucogenys
ENSAMXG00000012026	trmt1	88	66.214	ENSMEUG00000013756	TRMT1	99	66.214	Notamacropus_eugenii
ENSAMXG00000012026	trmt1	71	70.218	ENSOPRG00000009471	-	74	70.218	Ochotona_princeps
ENSAMXG00000012026	trmt1	85	67.304	ENSODEG00000010323	TRMT1	87	67.304	Octodon_degus
ENSAMXG00000012026	trmt1	94	77.564	ENSONIG00000000400	trmt1	91	82.250	Oreochromis_niloticus
ENSAMXG00000012026	trmt1	75	68.452	ENSOCUG00000021934	TRMT1	93	68.651	Oryctolagus_cuniculus
ENSAMXG00000012026	trmt1	91	71.707	ENSORLG00000020074	trmt1	95	71.707	Oryzias_latipes
ENSAMXG00000012026	trmt1	94	73.450	ENSORLG00020007561	trmt1	98	73.450	Oryzias_latipes_hni
ENSAMXG00000012026	trmt1	91	75.702	ENSORLG00015006547	trmt1	91	75.702	Oryzias_latipes_hsok
ENSAMXG00000012026	trmt1	87	77.530	ENSOMEG00000019343	trmt1	88	77.530	Oryzias_melastigma
ENSAMXG00000012026	trmt1	85	67.301	ENSOGAG00000025576	TRMT1	90	67.128	Otolemur_garnettii
ENSAMXG00000012026	trmt1	86	54.359	ENSOARG00000009397	TRMT1	83	53.871	Ovis_aries
ENSAMXG00000012026	trmt1	85	58.276	ENSPPRG00000012117	TRMT1	87	60.659	Panthera_pardus
ENSAMXG00000012026	trmt1	64	68.385	ENSPTIG00000008833	TRMT1	82	68.385	Panthera_tigris_altaica
ENSAMXG00000012026	trmt1	84	50.519	ENSPTRG00000050421	-	90	50.519	Pan_troglodytes
ENSAMXG00000012026	trmt1	85	67.820	ENSPTRG00000010557	TRMT1	87	67.820	Pan_troglodytes
ENSAMXG00000012026	trmt1	85	68.166	ENSPANG00000009247	TRMT1	87	68.166	Papio_anubis
ENSAMXG00000012026	trmt1	66	57.942	ENSPANG00000034058	-	78	57.942	Papio_anubis
ENSAMXG00000012026	trmt1	93	74.032	ENSPKIG00000005309	trmt1	92	74.032	Paramormyrops_kingsleyae
ENSAMXG00000012026	trmt1	82	58.664	ENSPSIG00000008762	TRMT1	79	58.664	Pelodiscus_sinensis
ENSAMXG00000012026	trmt1	89	76.134	ENSPMGG00000019764	trmt1	98	74.194	Periophthalmus_magnuspinnatus
ENSAMXG00000012026	trmt1	87	65.700	ENSPEMG00000016247	Trmt1	87	65.870	Peromyscus_maniculatus_bairdii
ENSAMXG00000012026	trmt1	86	63.525	ENSPMAG00000004329	trmt1	90	63.525	Petromyzon_marinus
ENSAMXG00000012026	trmt1	87	67.410	ENSPCIG00000019273	TRMT1	90	67.410	Phascolarctos_cinereus
ENSAMXG00000012026	trmt1	91	77.980	ENSPFOG00000008527	trmt1	93	77.980	Poecilia_formosa
ENSAMXG00000012026	trmt1	91	77.152	ENSPLAG00000018788	trmt1	93	78.689	Poecilia_latipinna
ENSAMXG00000012026	trmt1	91	77.649	ENSPMEG00000013120	trmt1	93	77.649	Poecilia_mexicana
ENSAMXG00000012026	trmt1	88	77.592	ENSPREG00000000211	trmt1	91	75.444	Poecilia_reticulata
ENSAMXG00000012026	trmt1	85	67.820	ENSPPYG00000009622	TRMT1	87	67.820	Pongo_abelii
ENSAMXG00000012026	trmt1	85	63.021	ENSPCAG00000003698	TRMT1	88	63.021	Procavia_capensis
ENSAMXG00000012026	trmt1	85	67.647	ENSPCOG00000008653	TRMT1	87	67.647	Propithecus_coquereli
ENSAMXG00000012026	trmt1	88	66.273	ENSPVAG00000015076	TRMT1	89	66.273	Pteropus_vampyrus
ENSAMXG00000012026	trmt1	88	75.856	ENSPNYG00000013960	trmt1	94	75.856	Pundamilia_nyererei
ENSAMXG00000012026	trmt1	87	88.565	ENSPNAG00000024859	trmt1	98	88.565	Pygocentrus_nattereri
ENSAMXG00000012026	trmt1	87	67.065	ENSRNOG00000002914	Trmt1	91	67.065	Rattus_norvegicus
ENSAMXG00000012026	trmt1	83	50.712	ENSRBIG00000037505	-	87	50.712	Rhinopithecus_bieti
ENSAMXG00000012026	trmt1	85	68.685	ENSRBIG00000038324	TRMT1	87	68.685	Rhinopithecus_bieti
ENSAMXG00000012026	trmt1	83	50.268	ENSRROG00000031847	-	86	50.268	Rhinopithecus_roxellana
ENSAMXG00000012026	trmt1	85	68.685	ENSRROG00000028599	TRMT1	87	68.685	Rhinopithecus_roxellana
ENSAMXG00000012026	trmt1	77	36.162	YDR120C	-	92	36.716	Saccharomyces_cerevisiae
ENSAMXG00000012026	trmt1	85	65.225	ENSSBOG00000028861	TRMT1	92	65.225	Saimiri_boliviensis_boliviensis
ENSAMXG00000012026	trmt1	86	67.993	ENSSHAG00000014381	TRMT1	96	66.892	Sarcophilus_harrisii
ENSAMXG00000012026	trmt1	89	77.496	ENSSFOG00015004139	trmt1	86	78.253	Scleropages_formosus
ENSAMXG00000012026	trmt1	93	76.490	ENSSMAG00000021136	trmt1	93	76.849	Scophthalmus_maximus
ENSAMXG00000012026	trmt1	89	80.135	ENSSDUG00000012740	trmt1	93	76.415	Seriola_dumerili
ENSAMXG00000012026	trmt1	93	76.518	ENSSLDG00000005971	trmt1	93	76.837	Seriola_lalandi_dorsalis
ENSAMXG00000012026	trmt1	81	65.625	ENSSARG00000005138	TRMT1	94	65.625	Sorex_araneus
ENSAMXG00000012026	trmt1	87	50.596	ENSSPUG00000001084	TRMT1	91	50.937	Sphenodon_punctatus
ENSAMXG00000012026	trmt1	87	78.510	ENSSPAG00000007153	trmt1	95	78.510	Stegastes_partitus
ENSAMXG00000012026	trmt1	87	66.667	ENSSSCG00000013744	TRMT1	91	66.667	Sus_scrofa
ENSAMXG00000012026	trmt1	84	76.732	ENSTRUG00000010700	trmt1	85	76.732	Takifugu_rubripes
ENSAMXG00000012026	trmt1	88	78.401	ENSTNIG00000018808	trmt1	100	78.401	Tetraodon_nigroviridis
ENSAMXG00000012026	trmt1	85	65.052	ENSTTRG00000006379	TRMT1	87	65.052	Tursiops_truncatus
ENSAMXG00000012026	trmt1	91	64.734	ENSUAMG00000022911	TRMT1	93	66.113	Ursus_americanus
ENSAMXG00000012026	trmt1	85	67.882	ENSUMAG00000006027	TRMT1	90	67.882	Ursus_maritimus
ENSAMXG00000012026	trmt1	85	68.166	ENSVVUG00000024177	TRMT1	87	68.166	Vulpes_vulpes
ENSAMXG00000012026	trmt1	70	67.167	ENSXETG00000033863	TRMT1	92	67.167	Xenopus_tropicalis
ENSAMXG00000012026	trmt1	91	77.649	ENSXCOG00000015733	trmt1	93	77.815	Xiphophorus_couchianus
ENSAMXG00000012026	trmt1	87	80.138	ENSXMAG00000013823	trmt1	99	80.138	Xiphophorus_maculatus