EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012238 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2201 bases
Position: chrAPWO02000067.1:2084833-2087033
Accession: 103026497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012577	Ribosomal_S18	PF01084.20	7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012577	-	300	XM_007239669	ENSAMXP00000012577	99 (aa)	XP_007239731	W5KYB5

Gene Model

Click here to download ENSAMXG00000012238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012238	mrps18c	92	79.121	ENSAPOG00000019045	mrps18c	71	79.121	Acanthochromis_polyacanthus
ENSAMXG00000012238	mrps18c	95	73.404	ENSACIG00000020253	mrps18c	93	73.404	Amphilophus_citrinellus
ENSAMXG00000012238	mrps18c	92	74.725	ENSAOCG00000014338	mrps18c	71	74.725	Amphiprion_ocellaris
ENSAMXG00000012238	mrps18c	88	77.011	ENSAPEG00000023068	-	83	76.136	Amphiprion_percula
ENSAMXG00000012238	mrps18c	92	74.725	ENSAPEG00000022956	mrps18c	71	74.725	Amphiprion_percula
ENSAMXG00000012238	mrps18c	90	79.775	ENSATEG00000023417	mrps18c	68	79.775	Anabas_testudineus
ENSAMXG00000012238	mrps18c	93	64.130	ENSAPLG00000012544	-	89	64.130	Anas_platyrhynchos
ENSAMXG00000012238	mrps18c	99	78.571	ENSACLG00000010521	mrps18c	89	79.121	Astatotilapia_calliptera
ENSAMXG00000012238	mrps18c	93	68.478	ENSCPBG00000007783	-	56	68.478	Chrysemys_picta_bellii
ENSAMXG00000012238	mrps18c	90	75.281	ENSCSEG00000000711	mrps18c	91	56.566	Cynoglossus_semilaevis
ENSAMXG00000012238	mrps18c	92	76.923	ENSCVAG00000020169	mrps18c	72	76.923	Cyprinodon_variegatus
ENSAMXG00000012238	mrps18c	93	83.696	ENSDARG00000069624	mrps18c	68	83.696	Danio_rerio
ENSAMXG00000012238	mrps18c	93	79.348	ENSELUG00000024603	mrps18c	69	79.348	Esox_lucius
ENSAMXG00000012238	mrps18c	93	73.913	ENSFHEG00000018752	-	72	73.913	Fundulus_heteroclitus
ENSAMXG00000012238	mrps18c	93	73.913	ENSFHEG00000015550	mrps18c	68	73.913	Fundulus_heteroclitus
ENSAMXG00000012238	mrps18c	91	66.667	ENSGALG00000023191	MRPS18C	63	66.667	Gallus_gallus
ENSAMXG00000012238	mrps18c	92	72.527	ENSGAFG00000008048	mrps18c	59	72.527	Gambusia_affinis
ENSAMXG00000012238	mrps18c	93	69.565	ENSGAGG00000015144	-	65	69.565	Gopherus_agassizii
ENSAMXG00000012238	mrps18c	92	79.121	ENSHBUG00000002008	mrps18c	70	79.121	Haplochromis_burtoni
ENSAMXG00000012238	mrps18c	92	78.022	ENSHCOG00000013161	mrps18c	69	78.022	Hippocampus_comes
ENSAMXG00000012238	mrps18c	99	84.694	ENSIPUG00000003783	mrps18c	95	84.694	Ictalurus_punctatus
ENSAMXG00000012238	mrps18c	92	75.824	ENSKMAG00000016467	mrps18c	71	75.824	Kryptolebias_marmoratus
ENSAMXG00000012238	mrps18c	92	82.418	ENSLBEG00000019174	mrps18c	70	82.418	Labrus_bergylta
ENSAMXG00000012238	mrps18c	92	82.418	ENSLBEG00000021861	mrps18c	70	82.418	Labrus_bergylta
ENSAMXG00000012238	mrps18c	91	73.333	ENSLACG00000011243	mrps18c	70	73.333	Latimeria_chalumnae
ENSAMXG00000012238	mrps18c	93	78.261	ENSLOCG00000012115	mrps18c	68	78.261	Lepisosteus_oculatus
ENSAMXG00000012238	mrps18c	92	71.429	ENSMAMG00000012386	mrps18c	68	71.429	Mastacembelus_armatus
ENSAMXG00000012238	mrps18c	92	79.121	ENSMZEG00005023278	mrps18c	70	79.121	Maylandia_zebra
ENSAMXG00000012238	mrps18c	92	78.022	ENSMMOG00000011316	mrps18c	69	78.022	Mola_mola
ENSAMXG00000012238	mrps18c	92	79.121	ENSNBRG00000006182	mrps18c	70	79.121	Neolamprologus_brichardi
ENSAMXG00000012238	mrps18c	91	70.000	ENSMEUG00000010972	-	71	70.000	Notamacropus_eugenii
ENSAMXG00000012238	mrps18c	92	78.022	ENSONIG00000012527	mrps18c	90	78.022	Oreochromis_niloticus
ENSAMXG00000012238	mrps18c	92	79.121	ENSORLG00015006869	mrps18c	71	79.121	Oryzias_latipes_hsok
ENSAMXG00000012238	mrps18c	90	78.652	ENSOMEG00000005009	mrps18c	86	78.652	Oryzias_melastigma
ENSAMXG00000012238	mrps18c	93	80.435	ENSPKIG00000021736	mrps18c	67	80.435	Paramormyrops_kingsleyae
ENSAMXG00000012238	mrps18c	91	76.667	ENSPMGG00000002991	mrps18c	91	76.667	Periophthalmus_magnuspinnatus
ENSAMXG00000012238	mrps18c	92	71.429	ENSPFOG00000002351	mrps18c	59	71.429	Poecilia_formosa
ENSAMXG00000012238	mrps18c	92	71.429	ENSPLAG00000015187	mrps18c	71	71.429	Poecilia_latipinna
ENSAMXG00000012238	mrps18c	92	71.429	ENSPMEG00000014488	mrps18c	59	71.429	Poecilia_mexicana
ENSAMXG00000012238	mrps18c	84	75.904	ENSPREG00000012593	mrps18c	85	75.904	Poecilia_reticulata
ENSAMXG00000012238	mrps18c	92	78.022	ENSPNYG00000010654	mrps18c	70	78.022	Pundamilia_nyererei
ENSAMXG00000012238	mrps18c	93	85.870	ENSPNAG00000009350	mrps18c	86	85.870	Pygocentrus_nattereri
ENSAMXG00000012238	mrps18c	93	79.348	ENSSFOG00015019444	mrps18c	68	79.348	Scleropages_formosus
ENSAMXG00000012238	mrps18c	92	76.923	ENSSDUG00000015676	mrps18c	71	76.923	Seriola_dumerili
ENSAMXG00000012238	mrps18c	92	76.923	ENSSLDG00000002034	mrps18c	71	76.923	Seriola_lalandi_dorsalis
ENSAMXG00000012238	mrps18c	89	68.182	ENSSPUG00000013990	-	64	68.182	Sphenodon_punctatus
ENSAMXG00000012238	mrps18c	91	73.333	ENSSPAG00000008687	mrps18c	70	73.333	Stegastes_partitus
ENSAMXG00000012238	mrps18c	91	74.444	ENSTRUG00000024403	mrps18c	69	74.444	Takifugu_rubripes
ENSAMXG00000012238	mrps18c	91	75.556	ENSTNIG00000005674	mrps18c	69	75.556	Tetraodon_nigroviridis
ENSAMXG00000012238	mrps18c	88	72.414	ENSXETG00000027597	mrps18c	66	72.414	Xenopus_tropicalis
ENSAMXG00000012238	mrps18c	92	72.527	ENSXCOG00000016208	mrps18c	89	74.157	Xiphophorus_couchianus
ENSAMXG00000012238	mrps18c	92	72.527	ENSXMAG00000012555	mrps18c	59	72.527	Xiphophorus_maculatus