EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012252 (Gene tree)
Gene ID: 103027358
Gene Symbol: helq
Alias: hel308|si:ch211-85e10.2
Full Name: helicase%2C POLQ like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 24305 bases
Position: chrAPWO02000067.1:2089169-2113473
Accession: 103027358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012608	ResIII	PF04851.15	1.8e-09	1	1
ENSAMXP00000042087	ResIII	PF04851.15	5.3e-07	1	1
ENSAMXP00000012608	DEAD	PF00270.29	8.2e-15	1	1
ENSAMXP00000042087	DEAD	PF00270.29	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012608	-	2829	XM_022666537	ENSAMXP00000012608	942 (aa)	XP_022522258	W5KYE6
ENSAMXT00000041597	-	1692	-	ENSAMXP00000042087	418 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000012252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012252	helq	93	62.875	ENSG00000163312	HELQ	88	62.875	Homo_sapiens
ENSAMXG00000012252	helq	80	58.036	ENSAPOG00000012769	-	92	58.036	Acanthochromis_polyacanthus
ENSAMXG00000012252	helq	80	57.522	ENSAPOG00000013379	-	88	57.522	Acanthochromis_polyacanthus
ENSAMXG00000012252	helq	86	63.625	ENSAMEG00000004921	HELQ	98	56.809	Ailuropoda_melanoleuca
ENSAMXG00000012252	helq	96	66.486	ENSACIG00000020216	helq	96	66.377	Amphilophus_citrinellus
ENSAMXG00000012252	helq	96	66.194	ENSAOCG00000014323	helq	93	66.302	Amphiprion_ocellaris
ENSAMXG00000012252	helq	98	66.066	ENSAPEG00000022964	helq	97	65.960	Amphiprion_percula
ENSAMXG00000012252	helq	95	60.523	ENSAPEG00000023153	-	94	60.414	Amphiprion_percula
ENSAMXG00000012252	helq	98	68.750	ENSATEG00000023420	helq	93	68.646	Anabas_testudineus
ENSAMXG00000012252	helq	95	60.668	ENSAPLG00000012292	HELQ	92	60.668	Anas_platyrhynchos
ENSAMXG00000012252	helq	98	55.354	ENSACAG00000010842	HELQ	95	55.253	Anolis_carolinensis
ENSAMXG00000012252	helq	98	57.563	ENSANAG00000033513	HELQ	89	57.563	Aotus_nancymaae
ENSAMXG00000012252	helq	85	73.133	ENSACLG00000010558	helq	99	73.012	Astatotilapia_calliptera
ENSAMXG00000012252	helq	99	56.784	ENSBTAG00000018151	HELQ	93	56.784	Bos_taurus
ENSAMXG00000012252	helq	79	38.077	WBGene00021905	helq-1	97	35.262	Caenorhabditis_elegans
ENSAMXG00000012252	helq	98	57.508	ENSCJAG00000005247	HELQ	89	57.508	Callithrix_jacchus
ENSAMXG00000012252	helq	93	58.972	ENSCAFG00000009108	HELQ	85	58.972	Canis_familiaris
ENSAMXG00000012252	helq	93	58.972	ENSCAFG00020010495	HELQ	91	58.972	Canis_lupus_dingo
ENSAMXG00000012252	helq	99	56.362	ENSCHIG00000020128	HELQ	91	56.362	Capra_hircus
ENSAMXG00000012252	helq	95	53.970	ENSTSYG00000012900	HELQ	89	53.970	Carlito_syrichta
ENSAMXG00000012252	helq	95	59.913	ENSCPOG00000009180	HELQ	87	59.913	Cavia_porcellus
ENSAMXG00000012252	helq	99	57.328	ENSCCAG00000036773	HELQ	91	57.200	Cebus_capucinus
ENSAMXG00000012252	helq	86	63.625	ENSCATG00000034442	HELQ	75	63.625	Cercocebus_atys
ENSAMXG00000012252	helq	98	57.406	ENSCLAG00000004733	HELQ	93	57.594	Chinchilla_lanigera
ENSAMXG00000012252	helq	86	63.625	ENSCSAG00000004405	HELQ	75	63.625	Chlorocebus_sabaeus
ENSAMXG00000012252	helq	86	65.264	ENSCPBG00000007787	HELQ	78	65.264	Chrysemys_picta_bellii
ENSAMXG00000012252	helq	79	51.680	ENSCING00000006332	-	96	51.550	Ciona_intestinalis
ENSAMXG00000012252	helq	92	60.714	ENSCANG00000002407	HELQ	81	60.714	Colobus_angolensis_palliatus
ENSAMXG00000012252	helq	93	60.908	ENSCGRG00001024451	Helq	88	60.908	Cricetulus_griseus_chok1gshd
ENSAMXG00000012252	helq	93	60.908	ENSCGRG00000000309	Helq	89	60.908	Cricetulus_griseus_crigri
ENSAMXG00000012252	helq	90	53.061	ENSCSEG00000000724	helq	88	53.061	Cynoglossus_semilaevis
ENSAMXG00000012252	helq	98	66.167	ENSCVAG00000020159	helq	98	65.632	Cyprinodon_variegatus
ENSAMXG00000012252	helq	97	74.598	ENSDARG00000079818	helq	99	79.863	Danio_rerio
ENSAMXG00000012252	helq	79	43.088	FBgn0002899	mus301	76	42.715	Drosophila_melanogaster
ENSAMXG00000012252	helq	82	72.727	ENSETEG00000012220	HELQ	75	72.727	Echinops_telfairi
ENSAMXG00000012252	helq	98	57.610	ENSEASG00005013248	HELQ	90	57.610	Equus_asinus_asinus
ENSAMXG00000012252	helq	98	56.225	ENSECAG00000020717	HELQ	92	56.225	Equus_caballus
ENSAMXG00000012252	helq	98	66.528	ENSELUG00000002083	helq	97	66.528	Esox_lucius
ENSAMXG00000012252	helq	98	57.375	ENSFCAG00000009921	HELQ	92	57.375	Felis_catus
ENSAMXG00000012252	helq	95	61.638	ENSFALG00000005255	HELQ	95	61.638	Ficedula_albicollis
ENSAMXG00000012252	helq	93	59.605	ENSFDAG00000018169	HELQ	91	59.605	Fukomys_damarensis
ENSAMXG00000012252	helq	98	66.423	ENSFHEG00000015542	helq	93	66.423	Fundulus_heteroclitus
ENSAMXG00000012252	helq	85	70.905	ENSGMOG00000000020	helq	99	70.905	Gadus_morhua
ENSAMXG00000012252	helq	99	58.879	ENSGALG00000011208	HELQ	89	58.775	Gallus_gallus
ENSAMXG00000012252	helq	98	67.263	ENSGAFG00000008037	helq	92	67.263	Gambusia_affinis
ENSAMXG00000012252	helq	85	72.034	ENSGACG00000001186	helq	100	73.580	Gasterosteus_aculeatus
ENSAMXG00000012252	helq	92	61.564	ENSGAGG00000015134	HELQ	84	61.581	Gopherus_agassizii
ENSAMXG00000012252	helq	98	57.536	ENSGGOG00000008598	HELQ	89	57.536	Gorilla_gorilla
ENSAMXG00000012252	helq	98	69.312	ENSHBUG00000001997	helq	96	69.206	Haplochromis_burtoni
ENSAMXG00000012252	helq	93	59.495	ENSHGLG00000019137	HELQ	86	59.495	Heterocephalus_glaber_female
ENSAMXG00000012252	helq	93	59.495	ENSHGLG00100015489	HELQ	86	59.495	Heterocephalus_glaber_male
ENSAMXG00000012252	helq	98	76.190	ENSIPUG00000003800	helq	92	76.931	Ictalurus_punctatus
ENSAMXG00000012252	helq	85	51.662	ENSSTOG00000025285	HELQ	80	51.662	Ictidomys_tridecemlineatus
ENSAMXG00000012252	helq	98	68.559	ENSKMAG00000016486	helq	93	68.559	Kryptolebias_marmoratus
ENSAMXG00000012252	helq	98	67.123	ENSLBEG00000021886	helq	93	67.018	Labrus_bergylta
ENSAMXG00000012252	helq	94	62.283	ENSLACG00000010835	HELQ	88	62.350	Latimeria_chalumnae
ENSAMXG00000012252	helq	98	65.470	ENSLOCG00000012099	helq	92	66.209	Lepisosteus_oculatus
ENSAMXG00000012252	helq	98	56.781	ENSLAFG00000001056	HELQ	93	56.781	Loxodonta_africana
ENSAMXG00000012252	helq	86	63.625	ENSMFAG00000040731	HELQ	75	63.625	Macaca_fascicularis
ENSAMXG00000012252	helq	86	63.625	ENSMMUG00000015350	HELQ	75	63.625	Macaca_mulatta
ENSAMXG00000012252	helq	86	63.625	ENSMNEG00000038829	HELQ	75	63.625	Macaca_nemestrina
ENSAMXG00000012252	helq	86	60.264	ENSMLEG00000035125	HELQ	75	59.304	Mandrillus_leucophaeus
ENSAMXG00000012252	helq	98	69.873	ENSMAMG00000012364	helq	91	69.873	Mastacembelus_armatus
ENSAMXG00000012252	helq	98	68.915	ENSMZEG00005023270	helq	92	68.809	Maylandia_zebra
ENSAMXG00000012252	helq	96	59.471	ENSMGAG00000008112	HELQ	94	59.365	Meleagris_gallopavo
ENSAMXG00000012252	helq	90	62.300	ENSMAUG00000000249	Helq	95	62.058	Mesocricetus_auratus
ENSAMXG00000012252	helq	98	57.390	ENSMOCG00000014354	Helq	91	57.187	Microtus_ochrogaster
ENSAMXG00000012252	helq	98	67.500	ENSMMOG00000011313	helq	99	67.500	Mola_mola
ENSAMXG00000012252	helq	85	61.807	ENSMODG00000020774	HELQ	76	61.928	Monodelphis_domestica
ENSAMXG00000012252	helq	98	57.622	MGP_CAROLIEiJ_G0027457	Helq	90	65.714	Mus_caroli
ENSAMXG00000012252	helq	98	57.317	ENSMUSG00000035266	Helq	90	62.667	Mus_musculus
ENSAMXG00000012252	helq	98	57.230	MGP_PahariEiJ_G0017235	Helq	90	66.216	Mus_pahari
ENSAMXG00000012252	helq	98	57.360	MGP_SPRETEiJ_G0028454	Helq	90	60.000	Mus_spretus
ENSAMXG00000012252	helq	92	60.512	ENSMPUG00000014683	HELQ	93	60.512	Mustela_putorius_furo
ENSAMXG00000012252	helq	92	59.344	ENSMLUG00000017053	HELQ	85	59.344	Myotis_lucifugus
ENSAMXG00000012252	helq	98	57.230	ENSNLEG00000009088	HELQ	89	57.230	Nomascus_leucogenys
ENSAMXG00000012252	helq	86	74.427	ENSONIG00000012532	helq	99	74.306	Oreochromis_niloticus
ENSAMXG00000012252	helq	74	62.552	ENSOANG00000002113	-	99	62.552	Ornithorhynchus_anatinus
ENSAMXG00000012252	helq	98	57.390	ENSOCUG00000013294	HELQ	92	57.288	Oryctolagus_cuniculus
ENSAMXG00000012252	helq	85	68.811	ENSORLG00000022717	helq	84	68.667	Oryzias_latipes
ENSAMXG00000012252	helq	95	63.725	ENSORLG00015006855	helq	94	63.646	Oryzias_latipes_hsok
ENSAMXG00000012252	helq	98	63.108	ENSOMEG00000004983	helq	92	62.791	Oryzias_melastigma
ENSAMXG00000012252	helq	98	48.534	ENSOGAG00000014188	HELQ	88	48.534	Otolemur_garnettii
ENSAMXG00000012252	helq	98	57.634	ENSOARG00000002630	HELQ	92	57.634	Ovis_aries
ENSAMXG00000012252	helq	98	57.579	ENSPPAG00000004520	HELQ	89	57.579	Pan_paniscus
ENSAMXG00000012252	helq	98	57.477	ENSPPRG00000010520	HELQ	89	57.477	Panthera_pardus
ENSAMXG00000012252	helq	98	57.172	ENSPTIG00000021394	HELQ	89	57.172	Panthera_tigris_altaica
ENSAMXG00000012252	helq	98	57.274	ENSPTRG00000016232	HELQ	89	57.274	Pan_troglodytes
ENSAMXG00000012252	helq	86	63.505	ENSPANG00000005130	HELQ	75	63.505	Papio_anubis
ENSAMXG00000012252	helq	98	62.525	ENSPKIG00000021702	helq	93	62.525	Paramormyrops_kingsleyae
ENSAMXG00000012252	helq	93	60.769	ENSPSIG00000015865	HELQ	90	60.879	Pelodiscus_sinensis
ENSAMXG00000012252	helq	97	64.590	ENSPMGG00000002986	helq	98	65.213	Periophthalmus_magnuspinnatus
ENSAMXG00000012252	helq	98	57.449	ENSPEMG00000007325	Helq	91	57.449	Peromyscus_maniculatus_bairdii
ENSAMXG00000012252	helq	83	61.132	ENSPMAG00000004427	helq	100	61.761	Petromyzon_marinus
ENSAMXG00000012252	helq	88	61.754	ENSPCIG00000019746	HELQ	84	61.637	Phascolarctos_cinereus
ENSAMXG00000012252	helq	97	65.240	ENSPFOG00000002091	helq	94	65.240	Poecilia_formosa
ENSAMXG00000012252	helq	100	65.102	ENSPLAG00000015199	helq	95	65.102	Poecilia_latipinna
ENSAMXG00000012252	helq	98	66.982	ENSPMEG00000014496	helq	90	66.982	Poecilia_mexicana
ENSAMXG00000012252	helq	98	66.458	ENSPREG00000012605	helq	92	66.458	Poecilia_reticulata
ENSAMXG00000012252	helq	99	56.570	ENSPPYG00000014897	HELQ	90	56.570	Pongo_abelii
ENSAMXG00000012252	helq	86	58.774	ENSPCAG00000004842	HELQ	75	58.774	Procavia_capensis
ENSAMXG00000012252	helq	92	55.656	ENSPVAG00000006438	HELQ	81	55.656	Pteropus_vampyrus
ENSAMXG00000012252	helq	98	57.611	ENSPNYG00000010575	helq	90	67.925	Pundamilia_nyererei
ENSAMXG00000012252	helq	98	82.577	ENSPNAG00000009397	helq	98	82.577	Pygocentrus_nattereri
ENSAMXG00000012252	helq	98	56.809	ENSRNOG00000002181	Helq	91	56.809	Rattus_norvegicus
ENSAMXG00000012252	helq	86	64.346	ENSRBIG00000041497	HELQ	75	64.528	Rhinopithecus_bieti
ENSAMXG00000012252	helq	86	64.346	ENSRROG00000045128	HELQ	75	64.528	Rhinopithecus_roxellana
ENSAMXG00000012252	helq	98	57.766	ENSSBOG00000034314	HELQ	92	57.766	Saimiri_boliviensis_boliviensis
ENSAMXG00000012252	helq	93	59.558	ENSSHAG00000006446	HELQ	86	59.558	Sarcophilus_harrisii
ENSAMXG00000012252	helq	90	68.993	ENSSFOG00015019460	helq	98	68.993	Scleropages_formosus
ENSAMXG00000012252	helq	98	68.196	ENSSDUG00000015665	helq	93	68.092	Seriola_dumerili
ENSAMXG00000012252	helq	100	51.860	ENSSLDG00000009263	-	97	52.392	Seriola_lalandi_dorsalis
ENSAMXG00000012252	helq	89	61.215	ENSSARG00000013932	HELQ	93	61.215	Sorex_araneus
ENSAMXG00000012252	helq	84	68.679	ENSSPAG00000008705	helq	85	67.231	Stegastes_partitus
ENSAMXG00000012252	helq	98	56.169	ENSSSCG00000009236	HELQ	92	56.169	Sus_scrofa
ENSAMXG00000012252	helq	98	57.649	ENSTGUG00000002154	HELQ	98	57.649	Taeniopygia_guttata
ENSAMXG00000012252	helq	98	67.016	ENSTRUG00000018644	helq	93	67.016	Takifugu_rubripes
ENSAMXG00000012252	helq	86	71.823	ENSTNIG00000005673	helq	99	72.422	Tetraodon_nigroviridis
ENSAMXG00000012252	helq	98	57.360	ENSTTRG00000004895	HELQ	89	57.360	Tursiops_truncatus
ENSAMXG00000012252	helq	86	63.625	ENSUAMG00000012816	HELQ	89	56.911	Ursus_americanus
ENSAMXG00000012252	helq	86	63.745	ENSUMAG00000008823	HELQ	92	56.911	Ursus_maritimus
ENSAMXG00000012252	helq	93	58.040	ENSVPAG00000011357	HELQ	81	58.040	Vicugna_pacos
ENSAMXG00000012252	helq	93	59.190	ENSVVUG00000015676	HELQ	85	59.190	Vulpes_vulpes
ENSAMXG00000012252	helq	86	62.936	ENSXETG00000001831	helq	99	62.936	Xenopus_tropicalis
ENSAMXG00000012252	helq	85	71.602	ENSXCOG00000016210	helq	100	71.602	Xiphophorus_couchianus
ENSAMXG00000012252	helq	85	71.602	ENSXMAG00000012563	helq	100	71.602	Xiphophorus_maculatus