EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012295 (Gene tree)
Gene ID: 103029389
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: OPA1%2C mitochondrial dynamin like GTPase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 50212 bases
Position: chr13:39031893-39082104
Accession: 103029389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012640	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSAMXP00000048353	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSAMXP00000039148	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSAMXP00000047828	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055581	-	7097	-	ENSAMXP00000039148	982 (aa)	-	UPI000BBDC484
ENSAMXT00000029756	-	6190	XM_007249068	ENSAMXP00000047828	982 (aa)	XP_007249130	UPI000BBDC484
ENSAMXT00000055949	-	7049	XM_007249069	ENSAMXP00000048353	966 (aa)	XP_007249131	UPI000BBD8A46
ENSAMXT00000012640	-	2688	-	ENSAMXP00000012640	895 (aa)	-	W5KYH8

Gene Model

Click here to download ENSAMXG00000012295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012295	opa1	100	95.362	ENSAPOG00000011980	opa1	100	90.974	Acanthochromis_polyacanthus
ENSAMXG00000012295	opa1	100	92.085	ENSACIG00000012521	opa1	96	92.085	Amphilophus_citrinellus
ENSAMXG00000012295	opa1	100	95.089	ENSAOCG00000020559	opa1	100	90.872	Amphiprion_ocellaris
ENSAMXG00000012295	opa1	100	90.806	ENSAPEG00000001641	opa1	100	91.116	Amphiprion_percula
ENSAMXG00000012295	opa1	100	49.736	WBGene00001134	eat-3	99	50.052	Caenorhabditis_elegans
ENSAMXG00000012295	opa1	100	85.667	ENSCSEG00000014266	opa1	95	85.667	Cynoglossus_semilaevis
ENSAMXG00000012295	opa1	100	94.407	ENSCVAG00000002438	opa1	96	90.164	Cyprinodon_variegatus
ENSAMXG00000012295	opa1	100	93.892	ENSDARG00000070801	opa1	100	93.892	Danio_rerio
ENSAMXG00000012295	opa1	94	55.426	FBgn0261276	Opa1	93	54.885	Drosophila_melanogaster
ENSAMXG00000012295	opa1	100	87.848	ENSFHEG00000003616	opa1	96	94.161	Fundulus_heteroclitus
ENSAMXG00000012295	opa1	100	90.393	ENSGACG00000009278	opa1	100	90.599	Gasterosteus_aculeatus
ENSAMXG00000012295	opa1	100	89.213	ENSHBUG00000005897	opa1	100	91.139	Haplochromis_burtoni
ENSAMXG00000012295	opa1	99	91.629	ENSHCOG00000016756	opa1	98	90.083	Hippocampus_comes
ENSAMXG00000012295	opa1	82	94.014	ENSKMAG00000009415	opa1	96	93.154	Kryptolebias_marmoratus
ENSAMXG00000012295	opa1	99	87.171	ENSMMOG00000008891	opa1	98	85.322	Mola_mola
ENSAMXG00000012295	opa1	100	93.315	ENSMALG00000016968	opa1	100	89.148	Monopterus_albus
ENSAMXG00000012295	opa1	100	91.862	ENSNBRG00000020394	opa1	96	92.196	Neolamprologus_brichardi
ENSAMXG00000012295	opa1	99	92.497	ENSPKIG00000003379	opa1	100	85.772	Paramormyrops_kingsleyae
ENSAMXG00000012295	opa1	100	79.039	ENSPKIG00000006473	OPA1	99	79.039	Paramormyrops_kingsleyae
ENSAMXG00000012295	opa1	100	91.862	ENSPNYG00000021747	opa1	96	91.862	Pundamilia_nyererei
ENSAMXG00000012295	opa1	100	96.313	ENSPNAG00000001917	opa1	100	96.066	Pygocentrus_nattereri
ENSAMXG00000012295	opa1	99	84.239	ENSSFOG00015009303	OPA1	97	84.096	Scleropages_formosus
ENSAMXG00000012295	opa1	99	90.868	ENSSMAG00000001797	opa1	96	91.094	Scophthalmus_maximus
ENSAMXG00000012295	opa1	68	92.857	ENSSDUG00000004968	opa1	99	92.857	Seriola_dumerili
ENSAMXG00000012295	opa1	100	94.679	ENSSLDG00000011089	opa1	100	85.490	Seriola_lalandi_dorsalis
ENSAMXG00000012295	opa1	100	91.322	ENSSPAG00000018388	opa1	100	91.529	Stegastes_partitus
ENSAMXG00000012295	opa1	80	89.524	ENSXCOG00000003267	opa1	92	88.918	Xiphophorus_couchianus
ENSAMXG00000012295	opa1	82	93.733	ENSXMAG00000005593	opa1	98	93.733	Xiphophorus_maculatus