EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012356 (Gene tree)
Gene ID: 103030207
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5850 bases
Position: chr12:261914-267763
Accession: 103030207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012700	THUMP	PF02926.17	7.6e-19	1	1
ENSAMXP00000030412	THUMP	PF02926.17	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012700	-	1424	XM_007237874	ENSAMXP00000012700	327 (aa)	XP_007237936	W5KYN8
ENSAMXT00000037199	-	4812	-	ENSAMXP00000030412	377 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000012356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012356	thumpd1	80	60.902	ENSG00000066654	THUMPD1	83	54.545	Homo_sapiens
ENSAMXG00000012356	thumpd1	78	66.148	ENSAPOG00000008440	thumpd1	98	57.716	Acanthochromis_polyacanthus
ENSAMXG00000012356	thumpd1	98	53.636	ENSAMEG00000006257	THUMPD1	91	53.636	Ailuropoda_melanoleuca
ENSAMXG00000012356	thumpd1	78	65.625	ENSACIG00000024395	thumpd1	94	57.098	Amphilophus_citrinellus
ENSAMXG00000012356	thumpd1	78	66.148	ENSAOCG00000003509	thumpd1	80	66.148	Amphiprion_ocellaris
ENSAMXG00000012356	thumpd1	78	66.148	ENSAPEG00000010515	thumpd1	80	66.148	Amphiprion_percula
ENSAMXG00000012356	thumpd1	78	67.578	ENSATEG00000004737	thumpd1	81	67.578	Anabas_testudineus
ENSAMXG00000012356	thumpd1	71	66.809	ENSAPLG00000015259	THUMPD1	92	61.654	Anas_platyrhynchos
ENSAMXG00000012356	thumpd1	55	57.778	ENSACAG00000022881	-	96	57.778	Anolis_carolinensis
ENSAMXG00000012356	thumpd1	92	55.591	ENSACAG00000009625	-	97	55.591	Anolis_carolinensis
ENSAMXG00000012356	thumpd1	97	44.272	ENSANAG00000027040	-	90	44.272	Aotus_nancymaae
ENSAMXG00000012356	thumpd1	98	54.462	ENSANAG00000026882	-	92	54.462	Aotus_nancymaae
ENSAMXG00000012356	thumpd1	79	50.187	ENSANAG00000027311	-	86	46.732	Aotus_nancymaae
ENSAMXG00000012356	thumpd1	85	61.210	ENSACLG00000004830	thumpd1	97	56.774	Astatotilapia_calliptera
ENSAMXG00000012356	thumpd1	95	55.108	ENSBTAG00000047673	THUMPD1	90	55.108	Bos_taurus
ENSAMXG00000012356	thumpd1	97	54.180	ENSCJAG00000009499	THUMPD1	91	54.180	Callithrix_jacchus
ENSAMXG00000012356	thumpd1	98	54.128	ENSCAFG00000017985	THUMPD1	91	54.128	Canis_familiaris
ENSAMXG00000012356	thumpd1	98	54.128	ENSCAFG00020021861	THUMPD1	91	54.128	Canis_lupus_dingo
ENSAMXG00000012356	thumpd1	95	55.418	ENSCHIG00000010134	THUMPD1	90	54.180	Capra_hircus
ENSAMXG00000012356	thumpd1	79	60.687	ENSTSYG00000011537	THUMPD1	85	55.629	Carlito_syrichta
ENSAMXG00000012356	thumpd1	94	54.799	ENSCPOG00000008919	-	90	53.870	Cavia_porcellus
ENSAMXG00000012356	thumpd1	94	54.799	ENSCPOG00000023684	-	90	53.870	Cavia_porcellus
ENSAMXG00000012356	thumpd1	97	54.128	ENSCCAG00000030205	THUMPD1	91	54.128	Cebus_capucinus
ENSAMXG00000012356	thumpd1	98	50.915	ENSCCAG00000019379	-	81	50.915	Cebus_capucinus
ENSAMXG00000012356	thumpd1	79	51.908	ENSCATG00000020844	-	76	50.923	Cercocebus_atys
ENSAMXG00000012356	thumpd1	80	60.902	ENSCATG00000040309	THUMPD1	75	60.902	Cercocebus_atys
ENSAMXG00000012356	thumpd1	98	54.268	ENSCLAG00000016508	THUMPD1	91	53.354	Chinchilla_lanigera
ENSAMXG00000012356	thumpd1	83	44.483	ENSCSAG00000009860	-	65	43.986	Chlorocebus_sabaeus
ENSAMXG00000012356	thumpd1	80	60.902	ENSCSAG00000007610	THUMPD1	75	60.902	Chlorocebus_sabaeus
ENSAMXG00000012356	thumpd1	98	53.313	ENSCHOG00000005587	THUMPD1	91	52.410	Choloepus_hoffmanni
ENSAMXG00000012356	thumpd1	84	58.503	ENSCPBG00000019055	THUMPD1	84	58.503	Chrysemys_picta_bellii
ENSAMXG00000012356	thumpd1	69	31.557	ENSCING00000021274	-	87	31.174	Ciona_intestinalis
ENSAMXG00000012356	thumpd1	71	57.082	ENSCANG00000038770	THUMPD1	61	64.674	Colobus_angolensis_palliatus
ENSAMXG00000012356	thumpd1	72	53.333	ENSCANG00000035822	-	78	53.333	Colobus_angolensis_palliatus
ENSAMXG00000012356	thumpd1	98	52.522	ENSCGRG00001014829	Thumpd1	95	52.522	Cricetulus_griseus_chok1gshd
ENSAMXG00000012356	thumpd1	98	52.522	ENSCGRG00000000060	Thumpd1	95	52.522	Cricetulus_griseus_crigri
ENSAMXG00000012356	thumpd1	94	57.962	ENSCSEG00000002041	thumpd1	98	58.280	Cynoglossus_semilaevis
ENSAMXG00000012356	thumpd1	85	63.475	ENSCVAG00000014960	thumpd1	98	60.252	Cyprinodon_variegatus
ENSAMXG00000012356	thumpd1	100	54.755	ENSDARG00000100264	thumpd1	100	54.755	Danio_rerio
ENSAMXG00000012356	thumpd1	97	54.545	ENSDNOG00000043510	THUMPD1	91	53.636	Dasypus_novemcinctus
ENSAMXG00000012356	thumpd1	79	61.798	ENSDORG00000028216	Thumpd1	75	61.798	Dipodomys_ordii
ENSAMXG00000012356	thumpd1	88	33.115	FBgn0035532	CG15014	92	33.119	Drosophila_melanogaster
ENSAMXG00000012356	thumpd1	93	50.153	ENSETEG00000002763	THUMPD1	74	50.949	Echinops_telfairi
ENSAMXG00000012356	thumpd1	80	42.593	ENSEBUG00000011011	THUMPD1	77	40.845	Eptatretus_burgeri
ENSAMXG00000012356	thumpd1	52	48.352	ENSEASG00005017428	-	93	48.352	Equus_asinus_asinus
ENSAMXG00000012356	thumpd1	98	54.711	ENSECAG00000005354	THUMPD1	92	54.103	Equus_caballus
ENSAMXG00000012356	thumpd1	81	61.765	ENSEEUG00000011256	THUMPD1	84	51.585	Erinaceus_europaeus
ENSAMXG00000012356	thumpd1	78	67.568	ENSELUG00000013612	thumpd1	61	68.340	Esox_lucius
ENSAMXG00000012356	thumpd1	98	53.939	ENSFCAG00000039296	THUMPD1	92	53.939	Felis_catus
ENSAMXG00000012356	thumpd1	71	63.248	ENSFALG00000014029	THUMPD1	96	57.609	Ficedula_albicollis
ENSAMXG00000012356	thumpd1	85	65.018	ENSFHEG00000013319	thumpd1	97	58.754	Fundulus_heteroclitus
ENSAMXG00000012356	thumpd1	95	59.425	ENSGMOG00000003369	thumpd1	98	58.786	Gadus_morhua
ENSAMXG00000012356	thumpd1	56	55.376	ENSGALG00000031384	-	85	55.376	Gallus_gallus
ENSAMXG00000012356	thumpd1	93	60.191	ENSGAFG00000011000	thumpd1	97	59.554	Gambusia_affinis
ENSAMXG00000012356	thumpd1	84	61.649	ENSGACG00000019511	thumpd1	86	60.702	Gasterosteus_aculeatus
ENSAMXG00000012356	thumpd1	76	62.500	ENSGAGG00000008225	THUMPD1	80	62.500	Gopherus_agassizii
ENSAMXG00000012356	thumpd1	55	56.906	ENSGGOG00000043232	-	60	56.906	Gorilla_gorilla
ENSAMXG00000012356	thumpd1	80	61.278	ENSGGOG00000005231	-	61	61.278	Gorilla_gorilla
ENSAMXG00000012356	thumpd1	85	60.854	ENSHBUG00000017996	thumpd1	97	56.452	Haplochromis_burtoni
ENSAMXG00000012356	thumpd1	95	56.000	ENSHGLG00000011001	-	91	54.242	Heterocephalus_glaber_female
ENSAMXG00000012356	thumpd1	95	56.000	ENSHGLG00100016023	THUMPD1	91	54.242	Heterocephalus_glaber_male
ENSAMXG00000012356	thumpd1	70	61.039	ENSHCOG00000008618	thumpd1	71	51.553	Hippocampus_comes
ENSAMXG00000012356	thumpd1	83	61.624	ENSIPUG00000012500	thumpd1	69	59.184	Ictalurus_punctatus
ENSAMXG00000012356	thumpd1	79	61.450	ENSSTOG00000007011	THUMPD1	75	60.902	Ictidomys_tridecemlineatus
ENSAMXG00000012356	thumpd1	97	52.381	ENSJJAG00000004295	-	95	52.381	Jaculus_jaculus
ENSAMXG00000012356	thumpd1	85	50.347	ENSKMAG00000009545	thumpd1	81	46.567	Kryptolebias_marmoratus
ENSAMXG00000012356	thumpd1	79	64.615	ENSLBEG00000009349	thumpd1	99	57.188	Labrus_bergylta
ENSAMXG00000012356	thumpd1	78	60.351	ENSLACG00000005833	THUMPD1	100	51.657	Latimeria_chalumnae
ENSAMXG00000012356	thumpd1	83	60.357	ENSLOCG00000000854	thumpd1	89	61.429	Lepisosteus_oculatus
ENSAMXG00000012356	thumpd1	95	55.521	ENSLAFG00000025838	THUMPD1	90	55.521	Loxodonta_africana
ENSAMXG00000012356	thumpd1	80	60.902	ENSMFAG00000036996	THUMPD1	75	60.902	Macaca_fascicularis
ENSAMXG00000012356	thumpd1	72	50.820	ENSMFAG00000041474	-	78	50.820	Macaca_fascicularis
ENSAMXG00000012356	thumpd1	80	60.902	ENSMMUG00000004225	THUMPD1	75	60.902	Macaca_mulatta
ENSAMXG00000012356	thumpd1	71	51.915	ENSMMUG00000038414	-	78	50.820	Macaca_mulatta
ENSAMXG00000012356	thumpd1	71	51.915	ENSMNEG00000038856	-	75	51.915	Macaca_nemestrina
ENSAMXG00000012356	thumpd1	80	60.902	ENSMNEG00000020726	THUMPD1	75	60.902	Macaca_nemestrina
ENSAMXG00000012356	thumpd1	80	60.902	ENSMLEG00000036436	THUMPD1	75	60.902	Mandrillus_leucophaeus
ENSAMXG00000012356	thumpd1	72	51.653	ENSMLEG00000030012	-	77	51.653	Mandrillus_leucophaeus
ENSAMXG00000012356	thumpd1	78	64.062	ENSMAMG00000006858	thumpd1	96	54.747	Mastacembelus_armatus
ENSAMXG00000012356	thumpd1	85	60.854	ENSMZEG00005013693	thumpd1	97	56.452	Maylandia_zebra
ENSAMXG00000012356	thumpd1	59	63.021	ENSMGAG00000010340	THUMPD1	91	62.766	Meleagris_gallopavo
ENSAMXG00000012356	thumpd1	81	60.507	ENSMAUG00000013306	Thumpd1	95	52.226	Mesocricetus_auratus
ENSAMXG00000012356	thumpd1	80	61.654	ENSMICG00000038483	-	75	61.654	Microcebus_murinus
ENSAMXG00000012356	thumpd1	65	57.277	ENSMICG00000030865	-	62	56.221	Microcebus_murinus
ENSAMXG00000012356	thumpd1	98	53.709	ENSMOCG00000003447	Thumpd1	95	53.709	Microtus_ochrogaster
ENSAMXG00000012356	thumpd1	78	65.385	ENSMMOG00000011323	thumpd1	77	63.462	Mola_mola
ENSAMXG00000012356	thumpd1	76	63.953	ENSMODG00000006971	-	69	63.566	Monodelphis_domestica
ENSAMXG00000012356	thumpd1	70	67.391	ENSMODG00000024776	-	70	63.953	Monodelphis_domestica
ENSAMXG00000012356	thumpd1	79	63.707	ENSMALG00000019522	thumpd1	99	56.731	Monopterus_albus
ENSAMXG00000012356	thumpd1	98	53.776	MGP_CAROLIEiJ_G0030382	Thumpd1	92	53.776	Mus_caroli
ENSAMXG00000012356	thumpd1	98	54.079	ENSMUSG00000030942	Thumpd1	92	54.079	Mus_musculus
ENSAMXG00000012356	thumpd1	95	54.769	MGP_PahariEiJ_G0013593	Thumpd1	92	54.769	Mus_pahari
ENSAMXG00000012356	thumpd1	84	60.364	ENSMLUG00000010547	THUMPD1	87	56.678	Myotis_lucifugus
ENSAMXG00000012356	thumpd1	98	54.518	ENSNGAG00000018643	Thumpd1	92	54.518	Nannospalax_galili
ENSAMXG00000012356	thumpd1	85	60.714	ENSNBRG00000006987	thumpd1	91	56.913	Neolamprologus_brichardi
ENSAMXG00000012356	thumpd1	80	61.278	ENSNLEG00000012369	THUMPD1	75	61.278	Nomascus_leucogenys
ENSAMXG00000012356	thumpd1	80	50.000	ENSOPRG00000011342	THUMPD1	64	50.382	Ochotona_princeps
ENSAMXG00000012356	thumpd1	98	53.776	ENSODEG00000012360	THUMPD1	92	52.568	Octodon_degus
ENSAMXG00000012356	thumpd1	78	64.591	ENSONIG00000000146	thumpd1	97	60.791	Oreochromis_niloticus
ENSAMXG00000012356	thumpd1	83	58.929	ENSOANG00000014297	THUMPD1	82	56.897	Ornithorhynchus_anatinus
ENSAMXG00000012356	thumpd1	80	61.194	ENSOCUG00000009895	-	75	61.742	Oryctolagus_cuniculus
ENSAMXG00000012356	thumpd1	78	64.202	ENSORLG00000027557	thumpd1	97	57.705	Oryzias_latipes
ENSAMXG00000012356	thumpd1	78	64.202	ENSORLG00020010206	thumpd1	97	56.550	Oryzias_latipes_hni
ENSAMXG00000012356	thumpd1	78	63.813	ENSORLG00015009581	thumpd1	97	56.592	Oryzias_latipes_hsok
ENSAMXG00000012356	thumpd1	83	61.455	ENSOMEG00000019361	thumpd1	97	56.135	Oryzias_melastigma
ENSAMXG00000012356	thumpd1	81	61.172	ENSOGAG00000026723	THUMPD1	77	61.172	Otolemur_garnettii
ENSAMXG00000012356	thumpd1	95	55.108	ENSOARG00000013107	THUMPD1	90	55.108	Ovis_aries
ENSAMXG00000012356	thumpd1	83	48.727	ENSPPAG00000001653	-	84	48.727	Pan_paniscus
ENSAMXG00000012356	thumpd1	80	60.902	ENSPPAG00000033818	-	61	60.902	Pan_paniscus
ENSAMXG00000012356	thumpd1	98	53.939	ENSPPRG00000014118	-	92	53.939	Panthera_pardus
ENSAMXG00000012356	thumpd1	98	53.636	ENSPTIG00000013856	-	92	53.636	Panthera_tigris_altaica
ENSAMXG00000012356	thumpd1	80	60.526	ENSPTRG00000007848	THUMPD1	61	60.526	Pan_troglodytes
ENSAMXG00000012356	thumpd1	80	47.170	ENSPTRG00000046073	-	79	47.170	Pan_troglodytes
ENSAMXG00000012356	thumpd1	80	60.902	ENSPANG00000025507	THUMPD1	75	60.902	Papio_anubis
ENSAMXG00000012356	thumpd1	71	52.340	ENSPANG00000034881	-	88	47.826	Papio_anubis
ENSAMXG00000012356	thumpd1	78	66.016	ENSPKIG00000014491	thumpd1	98	57.367	Paramormyrops_kingsleyae
ENSAMXG00000012356	thumpd1	74	64.463	ENSPSIG00000012430	THUMPD1	82	64.463	Pelodiscus_sinensis
ENSAMXG00000012356	thumpd1	77	67.843	ENSPMGG00000014479	thumpd1	90	67.843	Periophthalmus_magnuspinnatus
ENSAMXG00000012356	thumpd1	67	38.362	ENSPEMG00000002608	-	99	38.793	Peromyscus_maniculatus_bairdii
ENSAMXG00000012356	thumpd1	60	51.020	ENSPMAG00000001389	thumpd1	92	50.769	Petromyzon_marinus
ENSAMXG00000012356	thumpd1	76	63.566	ENSPCIG00000029241	THUMPD1	51	63.178	Phascolarctos_cinereus
ENSAMXG00000012356	thumpd1	97	60.559	ENSPFOG00000012649	thumpd1	98	59.938	Poecilia_formosa
ENSAMXG00000012356	thumpd1	97	59.813	ENSPLAG00000000137	thumpd1	98	59.190	Poecilia_latipinna
ENSAMXG00000012356	thumpd1	97	60.436	ENSPMEG00000007750	thumpd1	98	59.813	Poecilia_mexicana
ENSAMXG00000012356	thumpd1	84	64.260	ENSPREG00000000144	thumpd1	92	63.899	Poecilia_reticulata
ENSAMXG00000012356	thumpd1	61	63.682	ENSPPYG00000007160	-	67	65.217	Pongo_abelii
ENSAMXG00000012356	thumpd1	77	53.788	ENSPCAG00000001534	THUMPD1	85	54.251	Procavia_capensis
ENSAMXG00000012356	thumpd1	80	61.567	ENSPCOG00000024663	THUMPD1	76	61.567	Propithecus_coquereli
ENSAMXG00000012356	thumpd1	61	49.758	ENSPVAG00000003286	-	92	49.758	Pteropus_vampyrus
ENSAMXG00000012356	thumpd1	97	51.672	ENSPVAG00000005659	-	91	51.672	Pteropus_vampyrus
ENSAMXG00000012356	thumpd1	85	60.854	ENSPNYG00000007061	thumpd1	96	56.452	Pundamilia_nyererei
ENSAMXG00000012356	thumpd1	95	74.038	ENSPNAG00000024872	thumpd1	99	74.359	Pygocentrus_nattereri
ENSAMXG00000012356	thumpd1	61	53.365	ENSRNOG00000014946	AABR07005588.1	95	53.365	Rattus_norvegicus
ENSAMXG00000012356	thumpd1	80	60.902	ENSRBIG00000040752	THUMPD1	75	60.902	Rhinopithecus_bieti
ENSAMXG00000012356	thumpd1	82	49.301	ENSRBIG00000040136	-	97	49.301	Rhinopithecus_bieti
ENSAMXG00000012356	thumpd1	80	60.902	ENSRROG00000042189	THUMPD1	75	60.902	Rhinopithecus_roxellana
ENSAMXG00000012356	thumpd1	82	48.951	ENSRROG00000045699	-	97	48.951	Rhinopithecus_roxellana
ENSAMXG00000012356	thumpd1	90	56.478	ENSSBOG00000034246	THUMPD1	85	56.478	Saimiri_boliviensis_boliviensis
ENSAMXG00000012356	thumpd1	80	57.000	ENSSHAG00000003853	THUMPD1	71	63.922	Sarcophilus_harrisii
ENSAMXG00000012356	thumpd1	87	53.425	ENSSFOG00015007512	thumpd1	92	52.769	Scleropages_formosus
ENSAMXG00000012356	thumpd1	97	59.502	ENSSMAG00000000723	thumpd1	98	59.502	Scophthalmus_maximus
ENSAMXG00000012356	thumpd1	89	60.339	ENSSDUG00000014502	thumpd1	98	57.188	Seriola_dumerili
ENSAMXG00000012356	thumpd1	89	60.339	ENSSLDG00000007694	thumpd1	98	57.188	Seriola_lalandi_dorsalis
ENSAMXG00000012356	thumpd1	85	58.865	ENSSPUG00000005096	THUMPD1	85	58.865	Sphenodon_punctatus
ENSAMXG00000012356	thumpd1	94	60.000	ENSSPAG00000006993	thumpd1	95	60.000	Stegastes_partitus
ENSAMXG00000012356	thumpd1	98	54.354	ENSSSCG00000024748	THUMPD1	91	54.354	Sus_scrofa
ENSAMXG00000012356	thumpd1	83	61.172	ENSTGUG00000009247	THUMPD1	96	61.172	Taeniopygia_guttata
ENSAMXG00000012356	thumpd1	91	59.667	ENSTRUG00000015656	thumpd1	92	60.067	Takifugu_rubripes
ENSAMXG00000012356	thumpd1	85	61.786	ENSTNIG00000001584	thumpd1	96	60.473	Tetraodon_nigroviridis
ENSAMXG00000012356	thumpd1	95	56.113	ENSTBEG00000005252	THUMPD1	81	55.556	Tupaia_belangeri
ENSAMXG00000012356	thumpd1	95	55.418	ENSTTRG00000016435	THUMPD1	90	55.418	Tursiops_truncatus
ENSAMXG00000012356	thumpd1	62	44.762	ENSUAMG00000005779	-	93	44.762	Ursus_americanus
ENSAMXG00000012356	thumpd1	97	54.303	ENSVPAG00000003422	THUMPD1	95	54.303	Vicugna_pacos
ENSAMXG00000012356	thumpd1	81	60.000	ENSVVUG00000023241	THUMPD1	75	60.000	Vulpes_vulpes
ENSAMXG00000012356	thumpd1	78	52.344	ENSXETG00000005539	thumpd1	88	52.344	Xenopus_tropicalis
ENSAMXG00000012356	thumpd1	85	64.539	ENSXMAG00000026052	thumpd1	96	60.383	Xiphophorus_maculatus